Wall clock time and date at job start Sat Mar 6 2021 16:13:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.36443 * 125.80294 * 2 1 4 4 C 1.47338 * 127.19267 * 0.02562 * 3 2 1 5 5 O 1.21609 * 120.00216 * 359.70628 * 4 3 2 6 6 N 1.34778 * 119.99836 * 179.70919 * 4 3 2 7 7 C 1.39210 * 120.00015 * 184.90239 * 6 4 3 8 8 C 1.40288 * 120.16542 * 137.30009 * 7 6 4 9 9 C 1.47504 * 120.20118 * 359.95723 * 8 7 6 10 10 O 1.21589 * 119.99956 * 359.80589 * 9 8 7 11 11 N 1.34777 * 119.99939 * 179.80186 * 9 8 7 12 12 C 1.46492 * 120.00372 * 180.02562 * 11 9 8 13 13 H 1.09006 * 109.46701 * 34.99705 * 12 11 9 14 14 C 1.53000 * 109.47566 * 155.00228 * 12 11 9 15 15 C 1.52996 * 109.47297 * 180.02562 * 14 12 11 16 16 C 1.53004 * 109.47300 * 299.99824 * 15 14 12 17 17 H 1.08998 * 109.47080 * 300.00328 * 16 15 14 18 18 O 1.42894 * 109.47030 * 179.97438 * 16 15 14 19 19 C 1.53000 * 109.46802 * 59.99873 * 16 15 14 20 20 C 1.53003 * 109.47531 * 299.99999 * 19 16 15 21 21 C 1.39693 * 119.59263 * 180.23145 * 8 7 6 22 22 C 1.37787 * 119.92629 * 359.44941 * 21 8 7 23 23 C 1.38580 * 120.33403 * 0.57850 * 22 21 8 24 24 C 1.38007 * 120.40767 * 359.69772 * 23 22 21 25 25 C 1.47029 * 105.61411 * 179.76086 * 3 2 1 26 26 C 1.34180 * 105.95158 * 0.23730 * 25 3 2 27 27 C 1.50696 * 125.43192 * 179.97438 * 26 25 3 28 28 O 1.42908 * 109.47263 * 65.00479 * 27 26 25 29 29 Si 1.86297 * 109.47206 * 185.00387 * 27 26 25 30 30 O 1.33651 * 125.80828 * 180.17680 * 2 1 3 31 31 H 1.08997 * 109.47093 * 90.00484 * 1 2 3 32 32 H 1.09004 * 109.47215 * 209.99732 * 1 2 3 33 33 H 1.08998 * 109.47320 * 329.99657 * 1 2 3 34 34 H 0.96996 * 120.00257 * 4.90461 * 6 4 3 35 35 H 0.97007 * 119.99447 * 0.02562 * 11 9 8 36 36 H 1.08998 * 109.46931 * 59.99838 * 14 12 11 37 37 H 1.09004 * 109.46810 * 300.00217 * 14 12 11 38 38 H 1.08997 * 109.47104 * 179.97438 * 15 14 12 39 39 H 1.09008 * 109.47251 * 59.99916 * 15 14 12 40 40 H 0.96699 * 113.99925 * 60.00863 * 18 16 15 41 41 H 1.09006 * 109.47538 * 60.00213 * 19 16 15 42 42 H 1.09001 * 109.47147 * 179.97438 * 19 16 15 43 43 H 1.08997 * 109.47338 * 180.02562 * 20 19 16 44 44 H 1.08996 * 109.46955 * 300.00526 * 20 19 16 45 45 H 1.07998 * 120.03287 * 179.74726 * 21 8 7 46 46 H 1.07999 * 119.83565 * 180.31729 * 22 21 8 47 47 H 1.07999 * 119.79333 * 179.71409 * 23 22 21 48 48 H 1.08001 * 119.96466 * 180.02562 * 24 23 22 49 49 H 1.07997 * 127.02650 * 180.27540 * 25 3 2 50 50 H 1.09003 * 109.47516 * 305.00589 * 27 26 25 51 51 H 0.96702 * 113.99441 * 59.99184 * 28 27 26 52 52 H 1.48503 * 110.00103 * 58.67930 * 29 27 26 53 53 H 1.48500 * 110.00241 * 180.02562 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3051 1.1066 0.0000 4 6 1.8742 2.5156 0.0005 5 8 0.6893 2.7891 -0.0044 6 7 2.7934 3.5013 0.0064 7 6 2.3891 4.8294 0.1099 8 6 3.0834 5.7144 0.9482 9 6 4.2451 5.2429 1.7254 10 8 4.6014 4.0833 1.6433 11 7 4.9117 6.0976 2.5264 12 6 6.0658 5.6296 3.2979 13 1 6.6106 4.8832 2.7198 14 6 6.9883 6.8114 3.6034 15 6 8.1939 6.3225 4.4085 16 6 7.7123 5.6991 5.7202 17 1 7.1675 6.4452 6.2986 18 8 8.8383 5.2420 6.4719 19 6 6.7898 4.5174 5.4147 20 6 5.5841 5.0062 4.6096 21 6 2.6644 7.0433 1.0468 22 6 1.5821 7.4790 0.3138 23 6 0.8980 6.6021 -0.5130 24 6 1.2965 5.2848 -0.6164 25 6 3.6851 0.5992 0.0059 26 6 3.5860 -0.7389 0.0035 27 6 4.7459 -1.7009 0.0071 28 8 5.4707 -1.5686 1.2317 29 14 4.1077 -3.4439 -0.1514 30 8 2.2889 -1.0839 -0.0033 31 1 -0.3633 -0.0001 -1.0276 32 1 -0.3634 -0.8900 0.5138 33 1 -0.3634 0.8899 0.5139 34 1 3.7366 3.2854 -0.0616 35 1 4.6272 7.0227 2.5921 36 1 6.4433 7.5577 4.1814 37 1 7.3317 7.2552 2.6689 38 1 8.8513 7.1643 4.6258 39 1 8.7387 5.5763 3.8301 40 1 9.4673 5.9396 6.7017 41 1 7.3346 3.7711 4.8363 42 1 6.4471 4.0729 6.3492 43 1 4.9267 4.1644 4.3924 44 1 5.0394 5.7524 5.1880 45 1 3.1913 7.7297 1.6931 46 1 1.2625 8.5080 0.3872 47 1 0.0480 6.9518 -1.0800 48 1 0.7585 4.6077 -1.2633 49 1 4.5930 1.1840 0.0117 50 1 5.4057 -1.4779 -0.8314 51 1 4.9446 -1.7528 2.0219 52 1 3.3251 -3.5862 -1.4055 53 1 5.2420 -4.4024 -0.1485 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_13308374.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:13:04 Heat of formation + Delta-G solvation = -108.077154 kcal Electronic energy + Delta-G solvation = -38575.242691 eV Core-core repulsion = 33572.911396 eV Total energy + Delta-G solvation = -5002.331295 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.176 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -43.87263 -42.01164 -40.88520 -39.78453 -38.97216 -38.05584 -37.07426 -35.97617 -34.61583 -34.26229 -33.20474 -32.32000 -31.89961 -30.89359 -29.43791 -29.18248 -26.19014 -25.16035 -24.72505 -23.92099 -23.61480 -22.94543 -21.92493 -21.77755 -21.08964 -20.71075 -19.13690 -18.97914 -18.23331 -18.17781 -18.04001 -17.77307 -17.52322 -16.86246 -16.70580 -16.30303 -16.20680 -16.06944 -15.85357 -15.74329 -15.51126 -15.40256 -15.25759 -14.83172 -14.77066 -14.48495 -14.31981 -14.23613 -14.12295 -14.06535 -13.87204 -13.76550 -13.49657 -13.28610 -13.08634 -12.95147 -12.84298 -12.82033 -12.59187 -12.41281 -12.26002 -12.19343 -11.88612 -11.56637 -11.29415 -11.26276 -11.03337 -10.87330 -10.79213 -10.65311 -10.27933 -9.97729 -9.73477 -9.31404 -5.02722 -0.33595 0.04671 0.34018 0.74478 1.12833 1.34042 1.70300 1.75720 1.87148 1.93349 1.98940 2.10880 2.78117 3.14431 3.26572 3.41238 3.51579 3.55355 3.63355 3.67173 3.67743 3.75457 4.02773 4.03218 4.06464 4.10395 4.16919 4.24121 4.28288 4.30830 4.33657 4.35741 4.37448 4.41703 4.42777 4.56166 4.57709 4.64126 4.72393 4.80849 4.85821 4.93510 4.99697 5.04121 5.07077 5.09047 5.09955 5.12917 5.21890 5.22275 5.29674 5.36945 5.42953 5.44686 5.78868 5.86051 6.22449 6.43453 6.55586 6.88972 6.90288 7.10310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C 0.098 3.902 3 C -0.274 4.274 4 C 0.591 3.409 5 O -0.549 6.549 6 N -0.653 5.653 7 C 0.180 3.820 8 C -0.180 4.180 9 C 0.560 3.440 10 O -0.571 6.571 11 N -0.705 5.705 12 C 0.147 3.853 13 H 0.068 0.932 14 C -0.116 4.116 15 C -0.144 4.144 16 C 0.103 3.897 17 H 0.071 0.929 18 O -0.591 6.591 19 C -0.111 4.111 20 C -0.118 4.118 21 C -0.061 4.061 22 C -0.134 4.134 23 C -0.073 4.073 24 C -0.143 4.143 25 C -0.150 4.150 26 C -0.056 4.056 27 C -0.032 4.032 28 O -0.542 6.542 29 Si 0.787 3.213 30 O -0.164 6.164 31 H 0.102 0.898 32 H 0.106 0.894 33 H 0.097 0.903 34 H 0.421 0.579 35 H 0.415 0.585 36 H 0.093 0.907 37 H 0.083 0.917 38 H 0.091 0.909 39 H 0.059 0.941 40 H 0.395 0.605 41 H 0.054 0.946 42 H 0.065 0.935 43 H 0.049 0.951 44 H 0.082 0.918 45 H 0.164 0.836 46 H 0.165 0.835 47 H 0.153 0.847 48 H 0.124 0.876 49 H 0.160 0.840 50 H 0.136 0.864 51 H 0.399 0.601 52 H -0.290 1.290 53 H -0.276 1.276 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.243 6.669 2.148 7.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.044 3.956 3 C -0.279 4.279 4 C 0.383 3.617 5 O -0.429 6.429 6 N -0.300 5.300 7 C 0.084 3.916 8 C -0.185 4.185 9 C 0.349 3.651 10 O -0.452 6.452 11 N -0.357 5.357 12 C 0.042 3.958 13 H 0.086 0.914 14 C -0.154 4.154 15 C -0.182 4.182 16 C 0.045 3.955 17 H 0.089 0.911 18 O -0.399 6.399 19 C -0.149 4.149 20 C -0.156 4.156 21 C -0.080 4.080 22 C -0.152 4.152 23 C -0.092 4.092 24 C -0.164 4.164 25 C -0.170 4.170 26 C -0.104 4.104 27 C -0.141 4.141 28 O -0.350 6.350 29 Si 0.690 3.310 30 O -0.061 6.061 31 H 0.120 0.880 32 H 0.125 0.875 33 H 0.116 0.884 34 H 0.262 0.738 35 H 0.254 0.746 36 H 0.111 0.889 37 H 0.101 0.899 38 H 0.109 0.891 39 H 0.078 0.922 40 H 0.245 0.755 41 H 0.073 0.927 42 H 0.084 0.916 43 H 0.068 0.932 44 H 0.101 0.899 45 H 0.182 0.818 46 H 0.182 0.818 47 H 0.170 0.830 48 H 0.142 0.858 49 H 0.177 0.823 50 H 0.154 0.846 51 H 0.249 0.751 52 H -0.217 1.217 53 H -0.202 1.202 Dipole moment (debyes) X Y Z Total from point charges -0.655 4.546 1.184 4.743 hybrid contribution 0.981 1.207 -0.406 1.607 sum 0.326 5.753 0.778 5.814 Atomic orbital electron populations 1.20766 0.81781 1.05976 1.05479 1.23298 0.94941 0.82576 0.94791 1.21050 0.94333 0.93108 1.19364 1.17444 0.85013 0.84471 0.74802 1.90745 1.17052 1.84275 1.50819 1.43286 1.11669 1.03717 1.71291 1.17895 0.95791 0.83402 0.94506 1.19901 1.00337 0.96469 1.01842 1.18300 0.82444 0.85239 0.79090 1.90673 1.68590 1.18930 1.66974 1.45790 1.31272 1.13997 1.44606 1.21011 0.86063 0.97396 0.91321 0.91427 1.21713 0.95543 0.96512 1.01619 1.22177 0.98127 1.01527 0.96397 1.21879 0.86807 0.95383 0.91436 0.91108 1.86496 1.36858 1.41212 1.75377 1.21404 0.95579 0.97805 1.00159 1.21773 0.97234 1.00847 0.95788 1.21527 0.96146 0.92685 0.97674 1.21519 0.95452 1.01620 0.96617 1.21614 0.99043 0.91728 0.96797 1.21242 0.97622 0.97296 1.00210 1.22700 0.96329 0.94012 1.03939 1.22892 0.83100 0.95609 1.08763 1.24662 0.90232 1.07949 0.91283 1.86541 1.39638 1.93244 1.15591 0.93143 0.79918 0.71991 0.85945 1.83674 1.16468 1.34664 1.71321 0.87998 0.87492 0.88409 0.73802 0.74630 0.88883 0.89864 0.89085 0.92198 0.75490 0.92669 0.91588 0.93222 0.89946 0.81831 0.81782 0.82968 0.85818 0.82267 0.84643 0.75064 1.21658 1.20220 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.12 9.89 71.23 0.70 0.58 16 2 C 0.10 0.63 7.37 25.26 0.19 0.82 16 3 C -0.27 -2.62 6.31 -19.00 -0.12 -2.74 16 4 C 0.59 7.12 7.62 86.64 0.66 7.78 16 5 O -0.55 -8.14 12.78 -4.06 -0.05 -8.19 16 6 N -0.65 -6.51 4.35 -305.95 -1.33 -7.85 16 7 C 0.18 1.47 6.16 38.62 0.24 1.70 16 8 C -0.18 -0.68 5.89 -19.98 -0.12 -0.80 16 9 C 0.56 2.82 7.73 86.69 0.67 3.49 16 10 O -0.57 -6.63 13.73 -4.00 -0.05 -6.69 16 11 N -0.71 1.53 5.03 -445.73 -2.24 -0.71 16 12 C 0.15 -0.17 2.45 45.00 0.11 -0.06 16 13 H 0.07 0.30 7.58 -2.38 -0.02 0.28 16 14 C -0.12 0.78 5.39 30.59 0.16 0.95 16 15 C -0.14 0.70 5.54 30.59 0.17 0.87 16 16 C 0.10 -0.19 3.47 30.60 0.11 -0.08 16 17 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 18 O -0.59 -0.75 13.32 -148.98 -1.98 -2.74 16 19 C -0.11 -0.21 5.57 30.60 0.17 -0.04 16 20 C -0.12 -0.06 5.50 30.60 0.17 0.11 16 21 C -0.06 0.21 9.53 22.51 0.21 0.42 16 22 C -0.13 0.54 10.02 22.24 0.22 0.76 16 23 C -0.07 0.01 10.03 22.30 0.22 0.23 16 24 C -0.14 -0.91 8.66 22.37 0.19 -0.72 16 25 C -0.15 -1.12 10.49 23.65 0.25 -0.87 16 26 C -0.06 -0.26 6.18 24.76 0.15 -0.11 16 27 C -0.03 -0.04 2.97 71.23 0.21 0.18 16 28 O -0.54 -0.88 12.88 -148.98 -1.92 -2.80 16 29 Si 0.79 -0.46 32.09 68.60 2.20 1.74 16 30 O -0.16 -0.81 8.90 4.47 0.04 -0.77 16 31 H 0.10 -0.04 8.14 -2.39 -0.02 -0.06 16 32 H 0.11 -0.37 8.14 -2.38 -0.02 -0.39 16 33 H 0.10 0.46 6.49 -2.39 -0.02 0.44 16 34 H 0.42 4.03 6.07 -92.71 -0.56 3.47 16 35 H 0.42 -3.67 6.63 -92.70 -0.61 -4.29 16 36 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 37 H 0.08 -0.64 8.14 -2.39 -0.02 -0.65 16 38 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 39 H 0.06 -0.08 8.14 -2.38 -0.02 -0.10 16 40 H 0.40 -2.90 9.08 -74.06 -0.67 -3.57 16 41 H 0.05 0.29 8.14 -2.38 -0.02 0.27 16 42 H 0.07 0.21 8.14 -2.39 -0.02 0.19 16 43 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 44 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 45 H 0.16 -1.84 6.40 -2.91 -0.02 -1.85 16 46 H 0.16 -1.70 8.06 -2.91 -0.02 -1.72 16 47 H 0.15 -0.71 8.06 -2.91 -0.02 -0.74 16 48 H 0.12 1.10 6.80 -2.91 -0.02 1.08 16 49 H 0.16 1.07 7.75 -2.91 -0.02 1.04 16 50 H 0.14 0.03 7.96 -2.39 -0.02 0.01 16 51 H 0.40 -2.32 8.70 -74.06 -0.64 -2.96 16 52 H -0.29 -1.63 7.11 99.48 0.71 -0.92 16 53 H -0.28 -1.20 7.11 99.48 0.71 -0.49 16 Total: 0.00 -26.32 433.20 -2.22 -28.54 By element: Atomic # 1 Polarization: -11.54 SS G_CDS: -1.45 Total: -13.00 kcal Atomic # 6 Polarization: 7.88 SS G_CDS: 4.58 Total: 12.46 kcal Atomic # 7 Polarization: -4.98 SS G_CDS: -3.57 Total: -8.55 kcal Atomic # 8 Polarization: -17.22 SS G_CDS: -3.97 Total: -21.19 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: 2.20 Total: 1.74 kcal Total: -26.32 -2.22 -28.54 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_13308374.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.542 kcal (2) G-P(sol) polarization free energy of solvation -26.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.861 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.535 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.077 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds