Wall clock time and date at job start Sat Mar 6 2021 16:13:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37907 * 126.45882 * 2 1 4 4 C 1.46620 * 126.23858 * 0.02562 * 3 2 1 5 5 O 1.21703 * 119.99938 * 0.02562 * 4 3 2 6 6 N 1.34775 * 120.00214 * 180.02562 * 4 3 2 7 7 C 1.39172 * 119.99926 * 175.57171 * 6 4 3 8 8 C 1.40300 * 120.16292 * 215.52741 * 7 6 4 9 9 C 1.47494 * 120.20227 * 359.97438 * 8 7 6 10 10 O 1.21592 * 120.00048 * 5.44099 * 9 8 7 11 11 N 1.34774 * 119.99925 * 185.43428 * 9 8 7 12 12 C 1.46502 * 120.00108 * 180.02562 * 11 9 8 13 13 H 1.09001 * 109.47124 * 35.00474 * 12 11 9 14 14 C 1.53001 * 109.47005 * 155.00360 * 12 11 9 15 15 C 1.52999 * 109.46941 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.47413 * 300.00002 * 15 14 12 17 17 H 1.09001 * 109.47049 * 300.00196 * 16 15 14 18 18 O 1.42900 * 109.47125 * 179.97438 * 16 15 14 19 19 C 1.53001 * 109.46823 * 59.99778 * 16 15 14 20 20 C 1.52990 * 109.47404 * 300.00209 * 19 16 15 21 21 C 1.39694 * 119.59104 * 179.97438 * 8 7 6 22 22 C 1.37784 * 119.92685 * 0.02562 * 21 8 7 23 23 C 1.38577 * 120.33951 * 0.02562 * 22 21 8 24 24 C 1.38007 * 120.40909 * 359.70372 * 23 22 21 25 25 N 1.37664 * 107.52658 * 179.79502 * 3 2 1 26 26 C 1.35536 * 108.64152 * 0.38390 * 25 3 2 27 27 C 1.50698 * 125.55998 * 179.86605 * 26 25 3 28 28 O 1.42907 * 109.46959 * 119.69678 * 27 26 25 29 29 Si 1.86300 * 109.47328 * 359.69963 * 27 26 25 30 30 C 1.35465 * 108.87801 * 359.61294 * 26 25 3 31 31 H 1.08998 * 109.47681 * 269.98794 * 1 2 3 32 32 H 1.09000 * 109.46983 * 29.98953 * 1 2 3 33 33 H 1.09005 * 109.47165 * 149.98352 * 1 2 3 34 34 H 0.97000 * 119.99851 * 355.56200 * 6 4 3 35 35 H 0.97008 * 120.00063 * 0.02562 * 11 9 8 36 36 H 1.09002 * 109.47175 * 299.99691 * 14 12 11 37 37 H 1.09001 * 109.47087 * 60.00091 * 14 12 11 38 38 H 1.09001 * 109.47174 * 60.00122 * 15 14 12 39 39 H 1.09002 * 109.46825 * 179.97438 * 15 14 12 40 40 H 0.96700 * 113.99389 * 179.97438 * 18 16 15 41 41 H 1.09001 * 109.46967 * 60.00368 * 19 16 15 42 42 H 1.09001 * 109.46970 * 179.97438 * 19 16 15 43 43 H 1.09001 * 109.47189 * 300.00024 * 20 19 16 44 44 H 1.09003 * 109.47436 * 180.02562 * 20 19 16 45 45 H 1.08001 * 120.03202 * 180.02562 * 21 8 7 46 46 H 1.08004 * 119.83302 * 179.97438 * 22 21 8 47 47 H 1.08000 * 119.79486 * 179.97438 * 23 22 21 48 48 H 1.07993 * 119.96559 * 180.27721 * 24 23 22 49 49 H 0.96996 * 125.67960 * 180.23242 * 25 3 2 50 50 H 1.09007 * 109.47643 * 239.69662 * 27 26 25 51 51 H 0.96696 * 114.00350 * 179.97438 * 28 27 26 52 52 H 1.48502 * 109.99873 * 59.99479 * 29 27 26 53 53 H 1.48496 * 109.99891 * 181.31384 * 29 27 26 54 54 H 1.08001 * 126.06703 * 180.26846 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3265 1.1092 0.0000 4 6 1.8904 2.5090 0.0005 5 8 0.7032 2.7765 0.0015 6 7 2.8043 3.4996 -0.0001 7 6 2.3929 4.8259 -0.0926 8 6 3.1655 5.7555 -0.8049 9 6 4.4180 5.3331 -1.4592 10 8 4.7339 4.1590 -1.4670 11 7 5.2124 6.2486 -2.0485 12 6 6.4563 5.8290 -2.6989 13 1 6.3140 4.8509 -3.1584 14 6 6.8378 6.8474 -3.7750 15 6 8.1365 6.4089 -4.4547 16 6 9.2541 6.3247 -3.4131 17 1 9.3968 7.3028 -2.9535 18 8 10.4669 5.9146 -4.0478 19 6 8.8725 5.3063 -2.3369 20 6 7.5738 5.7448 -1.6573 21 6 2.7410 7.0836 -0.8906 22 6 1.5702 7.4720 -0.2768 23 6 0.8100 6.5516 0.4269 24 6 1.2133 5.2348 0.5158 25 7 3.6287 0.6625 0.0047 26 6 3.6218 -0.6928 -0.0010 27 6 4.8433 -1.5754 -0.0015 28 8 4.8353 -2.4003 1.1654 29 14 6.3754 -0.5154 -0.0020 30 6 2.3378 -1.1246 -0.0007 31 1 -0.3634 -0.0002 1.0276 32 1 -0.3633 0.8901 -0.5137 33 1 -0.3634 -0.8899 -0.5141 34 1 3.7488 3.2881 0.0642 35 1 4.9605 7.1854 -2.0421 36 1 6.0419 6.9070 -4.5174 37 1 6.9801 7.8256 -3.3155 38 1 7.9938 5.4309 -4.9143 39 1 8.4080 7.1342 -5.2217 40 1 11.2200 5.8402 -3.4459 41 1 8.7298 4.3283 -2.7965 42 1 9.6688 5.2460 -1.5951 43 1 7.7166 6.7229 -1.1977 44 1 7.3022 5.0195 -0.8903 45 1 3.3299 7.8051 -1.4375 46 1 1.2436 8.4994 -0.3437 47 1 -0.1061 6.8657 0.9050 48 1 0.6131 4.5225 1.0623 49 1 4.4194 1.2242 0.0090 50 1 4.8366 -2.2048 -0.8914 51 1 5.5941 -2.9961 1.2312 52 1 6.3964 0.3474 1.2064 53 1 7.5867 -1.3737 -0.0344 54 1 2.0135 -2.1548 -0.0004 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_13940406.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:13:51 Heat of formation + Delta-G solvation = -77.401482 kcal Electronic energy + Delta-G solvation = -38559.611681 eV Core-core repulsion = 33656.329245 eV Total energy + Delta-G solvation = -4903.282436 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.188 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -42.82290 -41.86443 -40.78505 -39.71598 -38.92656 -37.90597 -37.06352 -36.08786 -34.57704 -33.75973 -32.30207 -32.05215 -31.85639 -30.51207 -29.24723 -28.41797 -27.00521 -25.10211 -24.25476 -23.85812 -23.07653 -22.17476 -21.70112 -21.57218 -21.03147 -20.45327 -19.64178 -19.04670 -18.68515 -18.25463 -18.15767 -17.52322 -17.05039 -16.79232 -16.47775 -16.26183 -16.10512 -15.73476 -15.59749 -15.51366 -15.46904 -15.32231 -15.01173 -14.88193 -14.72234 -14.45119 -14.14838 -14.08852 -14.05368 -13.73768 -13.70891 -13.61022 -13.34258 -13.23794 -13.18036 -13.06859 -12.93358 -12.70787 -12.54236 -12.42579 -12.15903 -12.13692 -11.73123 -11.68591 -11.27879 -11.21279 -10.90270 -10.74552 -10.67638 -10.25991 -9.96147 -9.89200 -9.48134 -9.14302 -5.14001 -0.34441 0.05645 0.41783 1.02569 1.35045 1.46425 1.66930 1.72935 1.80977 1.91713 2.00335 2.11099 2.79402 3.27588 3.28459 3.56438 3.57237 3.64692 3.65210 3.73096 3.75631 4.02812 4.04064 4.07403 4.12881 4.17204 4.22350 4.31216 4.33051 4.34994 4.35708 4.38406 4.44027 4.45434 4.64922 4.66866 4.78576 4.82667 4.85108 4.89476 4.97405 5.03462 5.04640 5.09607 5.11608 5.13959 5.21004 5.25743 5.27999 5.31892 5.35963 5.45715 5.47114 5.57125 5.78288 5.86918 6.11281 6.24511 6.43963 6.52182 6.82050 6.88004 7.09004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C -0.079 4.079 3 C -0.071 4.071 4 C 0.589 3.411 5 O -0.534 6.534 6 N -0.657 5.657 7 C 0.183 3.817 8 C -0.183 4.183 9 C 0.565 3.435 10 O -0.572 6.572 11 N -0.704 5.704 12 C 0.145 3.855 13 H 0.073 0.927 14 C -0.115 4.115 15 C -0.112 4.112 16 C 0.102 3.898 17 H 0.068 0.932 18 O -0.590 6.590 19 C -0.145 4.145 20 C -0.122 4.122 21 C -0.059 4.059 22 C -0.137 4.137 23 C -0.072 4.072 24 C -0.152 4.152 25 N -0.525 5.525 26 C 0.068 3.932 27 C -0.051 4.051 28 O -0.549 6.549 29 Si 0.727 3.273 30 C -0.186 4.186 31 H 0.069 0.931 32 H 0.066 0.934 33 H 0.080 0.920 34 H 0.418 0.582 35 H 0.415 0.585 36 H 0.083 0.917 37 H 0.091 0.909 38 H 0.060 0.940 39 H 0.075 0.925 40 H 0.393 0.607 41 H 0.062 0.938 42 H 0.077 0.923 43 H 0.079 0.921 44 H 0.056 0.944 45 H 0.165 0.835 46 H 0.163 0.837 47 H 0.150 0.850 48 H 0.128 0.872 49 H 0.420 0.580 50 H 0.119 0.881 51 H 0.402 0.598 52 H -0.291 1.291 53 H -0.259 1.259 54 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.946 5.848 -1.675 7.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.088 4.088 3 C -0.183 4.183 4 C 0.380 3.620 5 O -0.411 6.411 6 N -0.304 5.304 7 C 0.087 3.913 8 C -0.189 4.189 9 C 0.354 3.646 10 O -0.453 6.453 11 N -0.355 5.355 12 C 0.041 3.959 13 H 0.091 0.909 14 C -0.153 4.153 15 C -0.150 4.150 16 C 0.044 3.956 17 H 0.086 0.914 18 O -0.398 6.398 19 C -0.183 4.183 20 C -0.160 4.160 21 C -0.077 4.077 22 C -0.156 4.156 23 C -0.091 4.091 24 C -0.173 4.173 25 N -0.126 5.126 26 C -0.049 4.049 27 C -0.161 4.161 28 O -0.359 6.359 29 Si 0.630 3.370 30 C -0.211 4.211 31 H 0.088 0.912 32 H 0.084 0.916 33 H 0.099 0.901 34 H 0.259 0.741 35 H 0.253 0.747 36 H 0.101 0.899 37 H 0.110 0.890 38 H 0.079 0.921 39 H 0.094 0.906 40 H 0.243 0.757 41 H 0.081 0.919 42 H 0.096 0.904 43 H 0.098 0.902 44 H 0.075 0.925 45 H 0.183 0.817 46 H 0.180 0.820 47 H 0.168 0.832 48 H 0.146 0.854 49 H 0.261 0.739 50 H 0.137 0.863 51 H 0.254 0.746 52 H -0.218 1.218 53 H -0.183 1.183 54 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 4.334 5.811 -1.715 7.449 hybrid contribution 1.160 -0.898 1.385 2.018 sum 5.494 4.913 -0.330 7.378 Atomic orbital electron populations 1.20354 0.88534 1.03172 1.02467 1.20277 0.96606 0.90863 1.01019 1.19912 0.84265 0.92671 1.21442 1.17250 0.85494 0.83640 0.75628 1.90793 1.16725 1.83310 1.50264 1.43427 1.11489 1.04069 1.71410 1.17891 0.95218 0.83102 0.95133 1.19817 0.98270 0.95912 1.04874 1.18195 0.83169 0.85433 0.77848 1.90592 1.74924 1.18640 1.61176 1.45799 1.22231 1.11179 1.56257 1.21050 0.82617 0.99320 0.92960 0.90889 1.21706 0.97190 0.98986 0.97392 1.21418 0.93108 1.02550 0.97902 1.21913 0.84584 0.96561 0.92584 0.91406 1.86488 1.20805 1.91509 1.41010 1.22180 0.97796 0.99824 0.98505 1.21804 0.93879 1.02505 0.97843 1.21516 0.96443 0.93052 0.96730 1.21503 0.94662 1.01425 0.97982 1.21610 0.99819 0.91594 0.96062 1.21357 0.96772 0.97761 1.01377 1.41963 1.07008 1.06507 1.57089 1.19889 0.96682 0.82209 1.06135 1.24255 1.01913 0.97897 0.92042 1.86554 1.50697 1.55608 1.43091 0.94710 0.74741 0.81427 0.86167 1.20785 0.90700 0.99333 1.10248 0.91233 0.91551 0.90069 0.74073 0.74662 0.89861 0.89017 0.92088 0.90589 0.75699 0.91940 0.90447 0.90216 0.92498 0.81727 0.81955 0.83231 0.85405 0.73863 0.86296 0.74628 1.21824 1.18340 0.82444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.71 9.83 71.24 0.70 -0.01 16 2 C -0.08 -0.78 6.21 -19.56 -0.12 -0.91 16 3 C -0.07 -0.72 7.05 40.34 0.28 -0.44 16 4 C 0.59 7.06 7.62 86.43 0.66 7.72 16 5 O -0.53 -8.51 12.24 -4.36 -0.05 -8.56 16 6 N -0.66 -5.57 4.53 -306.56 -1.39 -6.96 16 7 C 0.18 1.32 6.30 38.63 0.24 1.56 16 8 C -0.18 -0.40 5.89 -19.98 -0.12 -0.52 16 9 C 0.56 1.22 7.71 86.68 0.67 1.88 16 10 O -0.57 -4.08 13.65 -4.01 -0.05 -4.13 16 11 N -0.70 3.30 5.03 -445.74 -2.24 1.06 16 12 C 0.14 -0.58 2.45 44.99 0.11 -0.47 16 13 H 0.07 0.06 7.58 -2.39 -0.02 0.04 16 14 C -0.11 0.85 5.39 30.59 0.16 1.02 16 15 C -0.11 0.41 5.57 30.59 0.17 0.58 16 16 C 0.10 -0.39 3.47 30.59 0.11 -0.28 16 17 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 18 O -0.59 0.28 13.32 -148.98 -1.98 -1.70 16 19 C -0.14 0.61 5.54 30.59 0.17 0.78 16 20 C -0.12 0.52 5.50 30.59 0.17 0.69 16 21 C -0.06 0.25 9.52 22.51 0.21 0.46 16 22 C -0.14 0.57 10.02 22.24 0.22 0.79 16 23 C -0.07 -0.02 10.03 22.30 0.22 0.20 16 24 C -0.15 -1.01 8.68 22.37 0.19 -0.82 16 25 N -0.53 -3.02 5.47 -171.94 -0.94 -3.96 16 26 C 0.07 0.35 6.15 41.35 0.25 0.60 16 27 C -0.05 0.03 2.98 71.24 0.21 0.24 16 28 O -0.55 -0.71 12.84 -148.98 -1.91 -2.62 16 29 Si 0.73 -1.34 30.96 68.60 2.12 0.78 16 30 C -0.19 -1.35 10.64 22.01 0.23 -1.12 16 31 H 0.07 0.52 8.14 -2.39 -0.02 0.50 16 32 H 0.07 0.74 6.49 -2.39 -0.02 0.73 16 33 H 0.08 0.34 8.14 -2.38 -0.02 0.32 16 34 H 0.42 2.74 5.73 -92.71 -0.53 2.21 16 35 H 0.42 -4.42 6.66 -92.70 -0.62 -5.04 16 36 H 0.08 -0.65 8.14 -2.39 -0.02 -0.66 16 37 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 38 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 40 H 0.39 -3.16 9.08 -74.06 -0.67 -3.83 16 41 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 42 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 43 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 44 H 0.06 -0.04 8.14 -2.39 -0.02 -0.05 16 45 H 0.17 -2.01 6.44 -2.91 -0.02 -2.02 16 46 H 0.16 -1.65 8.06 -2.91 -0.02 -1.68 16 47 H 0.15 -0.58 8.06 -2.91 -0.02 -0.60 16 48 H 0.13 1.30 6.23 -2.91 -0.02 1.29 16 49 H 0.42 0.99 5.98 -92.71 -0.55 0.43 16 50 H 0.12 -0.67 7.96 -2.38 -0.02 -0.69 16 51 H 0.40 -3.07 8.74 -74.06 -0.65 -3.71 16 52 H -0.29 -1.52 7.11 99.48 0.71 -0.81 16 53 H -0.26 -0.13 7.11 99.48 0.71 0.57 16 54 H 0.16 0.68 8.06 -2.91 -0.02 0.66 16 Total: 0.00 -25.70 433.45 -3.68 -29.37 By element: Atomic # 1 Polarization: -13.27 SS G_CDS: -1.98 Total: -15.26 kcal Atomic # 6 Polarization: 7.22 SS G_CDS: 4.76 Total: 11.98 kcal Atomic # 7 Polarization: -5.29 SS G_CDS: -4.57 Total: -9.86 kcal Atomic # 8 Polarization: -13.01 SS G_CDS: -4.01 Total: -17.02 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: 2.12 Total: 0.78 kcal Total: -25.70 -3.68 -29.37 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_13940406.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.028 kcal (2) G-P(sol) polarization free energy of solvation -25.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds