Wall clock time and date at job start Sat Mar 6 2021 16:16:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37648 * 125.67478 * 2 1 4 4 C 1.46611 * 126.23464 * 0.05706 * 3 2 1 5 5 O 1.21698 * 119.99499 * 355.22118 * 4 3 2 6 6 N 1.34772 * 120.00391 * 175.22293 * 4 3 2 7 7 C 1.39168 * 120.00149 * 185.61199 * 6 4 3 8 8 C 1.40290 * 120.16566 * 205.50917 * 7 6 4 9 9 C 1.47504 * 120.20653 * 359.95443 * 8 7 6 10 10 O 1.21591 * 119.99677 * 5.30173 * 9 8 7 11 11 N 1.34777 * 120.00177 * 185.29625 * 9 8 7 12 12 C 1.46497 * 120.00148 * 179.97438 * 11 9 8 13 13 H 1.09008 * 109.46584 * 35.00445 * 12 11 9 14 14 C 1.53001 * 109.47380 * 155.00052 * 12 11 9 15 15 C 1.52999 * 109.47201 * 180.02562 * 14 12 11 16 16 C 1.52992 * 109.47141 * 300.00243 * 15 14 12 17 17 H 1.08998 * 109.47477 * 300.00322 * 16 15 14 18 18 O 1.42900 * 109.47373 * 180.02562 * 16 15 14 19 19 C 1.52998 * 109.47353 * 60.00177 * 16 15 14 20 20 C 1.52999 * 109.47109 * 275.00730 * 12 11 9 21 21 C 1.39693 * 119.59606 * 179.97438 * 8 7 6 22 22 C 1.37793 * 119.92286 * 0.02562 * 21 8 7 23 23 C 1.38577 * 120.33932 * 0.02562 * 22 21 8 24 24 C 1.38009 * 120.40378 * 359.70004 * 23 22 21 25 25 C 1.37928 * 107.53981 * 180.24451 * 3 2 1 26 26 C 1.39867 * 107.09225 * 359.77618 * 25 3 2 27 27 Br 1.89100 * 126.07437 * 180.02562 * 26 25 3 28 28 C 1.35517 * 107.85636 * 0.02562 * 26 25 3 29 29 C 1.50704 * 125.56998 * 179.97438 * 28 26 25 30 30 O 1.42899 * 109.47115 * 210.02168 * 29 28 26 31 31 Si 1.86298 * 109.46943 * 330.02337 * 29 28 26 32 32 H 1.08996 * 109.47184 * 275.00641 * 1 2 3 33 33 H 1.09006 * 109.47076 * 35.00175 * 1 2 3 34 34 H 1.08994 * 109.47545 * 155.00188 * 1 2 3 35 35 H 0.96999 * 120.00126 * 5.61844 * 6 4 3 36 36 H 0.97001 * 119.99657 * 0.02562 * 11 9 8 37 37 H 1.09000 * 109.46865 * 300.00332 * 14 12 11 38 38 H 1.08998 * 109.46444 * 60.00461 * 14 12 11 39 39 H 1.09000 * 109.47135 * 60.00201 * 15 14 12 40 40 H 1.08996 * 109.46794 * 180.02562 * 15 14 12 41 41 H 0.96699 * 114.00666 * 180.02562 * 18 16 15 42 42 H 1.08994 * 109.47416 * 59.99517 * 19 16 15 43 43 H 1.09007 * 109.47342 * 179.97438 * 19 16 15 44 44 H 1.09000 * 109.46884 * 299.99567 * 20 12 11 45 45 H 1.08996 * 109.47602 * 59.99897 * 20 12 11 46 46 H 1.08004 * 120.04182 * 180.02562 * 21 8 7 47 47 H 1.08001 * 119.83184 * 180.02562 * 22 21 8 48 48 H 1.08000 * 119.79560 * 179.97438 * 23 22 21 49 49 H 1.08009 * 119.96175 * 180.29844 * 24 23 22 50 50 H 1.08001 * 126.45488 * 179.75853 * 25 3 2 51 51 H 1.09005 * 109.46969 * 90.02510 * 29 28 26 52 52 H 0.96705 * 113.99621 * 59.99693 * 30 29 28 53 53 H 1.48503 * 109.99859 * 180.02562 * 31 29 28 54 54 H 1.48493 * 110.00126 * 301.31922 * 31 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8125 2.5118 0.0012 5 8 0.6251 2.7640 -0.0855 6 7 2.7089 3.5135 0.0982 7 6 2.2717 4.8294 0.2170 8 6 3.0923 5.8858 -0.2059 9 6 4.4234 5.6084 -0.7778 10 8 4.7738 4.4606 -0.9734 11 7 5.2510 6.6271 -1.0838 12 6 6.5732 6.3516 -1.6513 13 1 6.5143 5.4796 -2.3028 14 6 7.0432 7.5620 -2.4607 15 6 8.4237 7.2739 -3.0539 16 6 9.4174 6.9993 -1.9235 17 1 9.4766 7.8711 -1.2719 18 8 10.7070 6.7309 -2.4775 19 6 8.9475 5.7889 -1.1142 20 6 7.5666 6.0773 -0.5204 21 6 2.6414 7.2021 -0.0816 22 6 1.3974 7.4548 0.4544 23 6 0.5897 6.4091 0.8722 24 6 1.0191 5.1032 0.7506 25 6 3.5785 0.6889 -0.0056 26 6 3.5531 -0.7096 -0.0038 27 35 5.0610 -1.8507 -0.0088 28 6 2.2558 -1.1016 0.0022 29 6 1.7713 -2.5286 0.0055 30 8 0.5106 -2.6051 -0.6631 31 14 3.0085 -3.6065 -0.8767 32 1 -0.3633 0.0897 1.0237 33 1 -0.3633 0.8418 -0.5895 34 1 -0.3634 -0.9313 -0.4342 35 1 3.6587 3.3174 0.0852 36 1 4.9715 7.5427 -0.9274 37 1 6.3354 7.7573 -3.2663 38 1 7.1020 8.4339 -1.8092 39 1 8.3645 6.4021 -3.7054 40 1 8.7587 8.1364 -3.6301 41 1 11.3886 6.5471 -1.8166 42 1 8.8882 4.9171 -1.7656 43 1 9.6557 5.5929 -0.3090 44 1 7.6254 6.9492 0.1309 45 1 7.2318 5.2149 0.0561 46 1 3.2671 8.0208 -0.4052 47 1 1.0501 8.4730 0.5494 48 1 -0.3836 6.6173 1.2914 49 1 0.3817 4.2934 1.0741 50 1 4.4587 1.3147 -0.0108 51 1 1.6585 -2.8716 1.0340 52 1 0.5361 -2.3144 -1.5850 53 1 2.5419 -5.0163 -0.8809 54 1 3.1949 -3.1296 -2.2705 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_5000100.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:16:05 Heat of formation + Delta-G solvation = -67.421115 kcal Electronic energy + Delta-G solvation = -40684.119842 eV Core-core repulsion = 35441.452185 eV Total energy + Delta-G solvation = -5242.667657 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 478.098 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -43.11322 -42.00015 -40.87623 -39.75593 -38.94903 -38.11848 -37.09104 -36.15527 -34.69640 -34.56225 -32.73994 -32.30918 -31.85438 -31.54027 -30.51694 -29.25940 -27.51711 -27.11157 -25.11366 -24.42174 -23.86449 -23.30171 -22.74563 -21.85458 -21.44013 -21.05252 -20.69192 -19.30234 -18.95729 -18.50535 -18.19759 -18.11761 -17.52978 -17.35408 -16.85242 -16.62234 -16.45656 -16.15468 -15.99708 -15.74273 -15.64144 -15.52237 -15.47128 -15.32369 -15.10661 -14.77383 -14.69546 -14.66149 -14.44833 -14.16199 -14.13382 -13.85320 -13.75039 -13.34677 -13.29930 -13.23831 -13.13443 -12.96072 -12.85480 -12.63633 -12.49167 -12.42547 -12.16372 -12.10815 -11.81908 -11.73526 -11.69464 -11.29286 -11.25932 -10.96223 -10.85927 -10.74736 -10.27816 -9.99067 -9.97166 -9.56056 -9.17224 -4.72029 -0.40384 -0.03351 0.25963 0.37919 0.82315 1.10581 1.36232 1.51093 1.74099 1.87569 1.93024 1.99111 2.12756 2.80671 2.96212 3.18501 3.28268 3.31870 3.55715 3.63192 3.65484 3.73045 3.74377 4.01604 4.03757 4.04638 4.12733 4.21422 4.22205 4.28313 4.29795 4.31388 4.32708 4.33894 4.38950 4.42937 4.45215 4.52915 4.66183 4.66993 4.82379 4.89448 4.95518 4.97487 5.04256 5.10997 5.12534 5.13545 5.21823 5.25578 5.30200 5.32401 5.43223 5.45370 5.48116 5.68026 5.86009 6.14177 6.17278 6.42638 6.73767 6.88663 7.09275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.384 5.384 3 C -0.062 4.062 4 C 0.589 3.411 5 O -0.546 6.546 6 N -0.641 5.641 7 C 0.190 3.810 8 C -0.188 4.188 9 C 0.565 3.435 10 O -0.573 6.573 11 N -0.703 5.703 12 C 0.145 3.855 13 H 0.069 0.931 14 C -0.114 4.114 15 C -0.112 4.112 16 C 0.102 3.898 17 H 0.071 0.929 18 O -0.591 6.591 19 C -0.144 4.144 20 C -0.121 4.121 21 C -0.055 4.055 22 C -0.142 4.142 23 C -0.069 4.069 24 C -0.163 4.163 25 C -0.089 4.089 26 C -0.191 4.191 27 Br 0.093 6.907 28 C 0.067 3.933 29 C -0.038 4.038 30 O -0.537 6.537 31 Si 0.628 3.372 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.127 0.873 35 H 0.428 0.572 36 H 0.416 0.584 37 H 0.082 0.918 38 H 0.094 0.906 39 H 0.058 0.942 40 H 0.077 0.923 41 H 0.394 0.606 42 H 0.057 0.943 43 H 0.079 0.921 44 H 0.082 0.918 45 H 0.056 0.944 46 H 0.165 0.835 47 H 0.162 0.838 48 H 0.150 0.850 49 H 0.134 0.866 50 H 0.171 0.829 51 H 0.147 0.853 52 H 0.388 0.612 53 H -0.262 1.262 54 H -0.281 1.281 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.790 7.481 3.695 8.797 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.056 5.056 3 C -0.176 4.176 4 C 0.380 3.620 5 O -0.426 6.426 6 N -0.291 5.291 7 C 0.092 3.908 8 C -0.194 4.194 9 C 0.354 3.646 10 O -0.455 6.455 11 N -0.354 5.354 12 C 0.040 3.960 13 H 0.087 0.913 14 C -0.152 4.152 15 C -0.150 4.150 16 C 0.044 3.956 17 H 0.088 0.912 18 O -0.399 6.399 19 C -0.183 4.183 20 C -0.159 4.159 21 C -0.074 4.074 22 C -0.160 4.160 23 C -0.088 4.088 24 C -0.183 4.183 25 C -0.116 4.116 26 C -0.276 4.276 27 Br 0.176 6.824 28 C -0.056 4.056 29 C -0.149 4.149 30 O -0.345 6.345 31 Si 0.530 3.470 32 H 0.102 0.898 33 H 0.109 0.891 34 H 0.145 0.855 35 H 0.274 0.726 36 H 0.254 0.746 37 H 0.101 0.899 38 H 0.112 0.888 39 H 0.076 0.924 40 H 0.095 0.905 41 H 0.244 0.756 42 H 0.076 0.924 43 H 0.097 0.903 44 H 0.101 0.899 45 H 0.075 0.925 46 H 0.183 0.817 47 H 0.180 0.820 48 H 0.167 0.833 49 H 0.152 0.848 50 H 0.189 0.811 51 H 0.164 0.836 52 H 0.238 0.762 53 H -0.188 1.188 54 H -0.207 1.207 Dipole moment (debyes) X Y Z Total from point charges 2.050 5.763 2.828 6.739 hybrid contribution -0.754 0.482 -0.244 0.928 sum 1.296 6.246 2.584 6.882 Atomic orbital electron populations 1.22848 0.73832 1.07184 1.05200 1.43925 1.07879 1.03362 1.50459 1.19845 0.90486 0.87414 1.19854 1.17071 0.85285 0.83974 0.75687 1.90764 1.16909 1.84726 1.50227 1.43449 1.12292 1.03838 1.69478 1.17914 0.94489 0.82882 0.95478 1.19695 0.95978 0.94434 1.09268 1.18238 0.84253 0.85050 0.77010 1.90555 1.77050 1.22077 1.55812 1.45777 1.15988 1.09717 1.63885 1.21045 0.81040 0.99175 0.94718 0.91308 1.21706 0.96017 0.97279 1.00234 1.21422 0.93497 1.02580 0.97542 1.21914 0.82888 0.96335 0.94468 0.91159 1.86484 1.20233 1.93506 1.39679 1.22186 0.97084 0.98872 1.00139 1.21807 0.93895 1.02503 0.97728 1.21507 0.96593 0.94100 0.95173 1.21491 0.93963 1.00823 0.99769 1.21609 1.00484 0.91291 0.95377 1.21440 0.95691 0.99112 1.02075 1.21442 0.95484 0.93031 1.01622 1.20660 0.91054 0.94495 1.21426 1.96308 1.32843 1.55833 1.97375 1.21073 0.89352 0.90405 1.04793 1.24754 0.93163 0.91998 1.04955 1.86509 1.29546 1.88351 1.30058 0.92655 0.92386 0.78183 0.83813 0.89813 0.89069 0.85499 0.72590 0.74559 0.89894 0.88777 0.92363 0.90483 0.75645 0.92406 0.90283 0.89924 0.92515 0.81736 0.82023 0.83262 0.84803 0.81117 0.83610 0.76169 1.18769 1.20652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.13 10.25 127.77 1.31 1.44 16 2 N -0.38 -2.06 3.16 -519.62 -1.64 -3.70 16 3 C -0.06 -0.45 6.88 40.34 0.28 -0.17 16 4 C 0.59 5.51 7.57 86.43 0.65 6.17 16 5 O -0.55 -6.90 11.93 -4.34 -0.05 -6.95 16 6 N -0.64 -4.65 4.83 -306.59 -1.48 -6.13 16 7 C 0.19 1.17 6.43 38.63 0.25 1.42 16 8 C -0.19 -0.32 5.89 -19.98 -0.12 -0.44 16 9 C 0.57 1.33 7.71 86.69 0.67 2.00 16 10 O -0.57 -4.64 13.48 -4.00 -0.05 -4.69 16 11 N -0.70 3.04 5.03 -445.73 -2.24 0.80 16 12 C 0.14 -0.46 2.45 44.99 0.11 -0.35 16 13 H 0.07 0.17 7.58 -2.38 -0.02 0.15 16 14 C -0.11 0.78 5.39 30.59 0.16 0.95 16 15 C -0.11 0.32 5.57 30.59 0.17 0.49 16 16 C 0.10 -0.32 3.47 30.59 0.11 -0.21 16 17 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 18 O -0.59 -0.20 13.32 -148.98 -1.98 -2.19 16 19 C -0.14 0.46 5.55 30.61 0.17 0.63 16 20 C -0.12 0.42 5.50 30.61 0.17 0.59 16 21 C -0.05 0.26 9.52 22.52 0.21 0.47 16 22 C -0.14 0.67 10.02 22.25 0.22 0.90 16 23 C -0.07 0.05 10.03 22.30 0.22 0.27 16 24 C -0.16 -0.87 8.69 22.37 0.19 -0.68 16 25 C -0.09 -0.41 10.34 22.59 0.23 -0.18 16 26 C -0.19 -0.71 6.15 22.03 0.14 -0.57 16 27 Br 0.09 0.03 28.24 -20.37 -0.58 -0.55 16 28 C 0.07 0.25 6.15 41.35 0.25 0.51 16 29 C -0.04 -0.06 2.99 71.24 0.21 0.16 16 30 O -0.54 -0.80 9.91 -148.98 -1.48 -2.28 16 31 Si 0.63 2.18 27.10 68.60 1.86 4.04 16 32 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 33 H 0.09 0.46 6.51 -2.38 -0.02 0.44 16 34 H 0.13 -0.05 4.89 -2.39 -0.01 -0.06 16 35 H 0.43 2.70 4.92 -92.71 -0.46 2.24 16 36 H 0.42 -4.41 6.66 -92.71 -0.62 -5.03 16 37 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 38 H 0.09 -1.00 8.14 -2.39 -0.02 -1.02 16 39 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 40 H 0.08 -0.21 8.14 -2.39 -0.02 -0.22 16 41 H 0.39 -2.89 9.08 -74.06 -0.67 -3.56 16 42 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 43 H 0.08 -0.40 8.14 -2.38 -0.02 -0.42 16 44 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 45 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 46 H 0.17 -2.06 6.44 -2.91 -0.02 -2.08 16 47 H 0.16 -1.72 8.06 -2.91 -0.02 -1.75 16 48 H 0.15 -0.72 8.06 -2.91 -0.02 -0.74 16 49 H 0.13 1.14 5.81 -2.91 -0.02 1.12 16 50 H 0.17 0.29 7.45 -2.91 -0.02 0.27 16 51 H 0.15 -0.20 7.96 -2.38 -0.02 -0.22 16 52 H 0.39 -1.05 8.46 -74.05 -0.63 -1.68 16 53 H -0.26 -2.29 7.11 99.48 0.71 -1.59 16 54 H -0.28 -2.53 7.11 99.48 0.71 -1.83 16 Total: 0.00 -22.30 441.07 -3.35 -25.65 By element: Atomic # 1 Polarization: -16.07 SS G_CDS: -1.32 Total: -17.39 kcal Atomic # 6 Polarization: 7.77 SS G_CDS: 5.62 Total: 13.39 kcal Atomic # 7 Polarization: -3.67 SS G_CDS: -5.37 Total: -9.03 kcal Atomic # 8 Polarization: -12.55 SS G_CDS: -3.57 Total: -16.12 kcal Atomic # 14 Polarization: 2.18 SS G_CDS: 1.86 Total: 4.04 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.58 Total: -0.55 kcal Total: -22.30 -3.35 -25.65 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_5000100.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.772 kcal (2) G-P(sol) polarization free energy of solvation -22.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.649 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds