Wall clock time and date at job start Sat Mar 6 2021 16:16:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.46965 * 2 1 4 4 C 1.50701 * 109.46942 * 239.99830 * 2 1 3 5 5 C 1.32764 * 124.70829 * 299.72362 * 4 2 1 6 6 C 1.44432 * 113.08588 * 179.85701 * 5 4 2 7 7 C 1.47145 * 123.46564 * 180.19903 * 6 5 4 8 8 O 1.21633 * 120.00327 * 0.26899 * 7 6 5 9 9 N 1.34780 * 119.99837 * 180.27486 * 7 6 5 10 10 C 1.39199 * 119.99970 * 175.57728 * 9 7 6 11 11 C 1.40291 * 120.16658 * 215.53054 * 10 9 7 12 12 C 1.47508 * 120.19793 * 359.97438 * 11 10 9 13 13 O 1.21586 * 120.00151 * 5.44733 * 12 11 10 14 14 N 1.34778 * 119.99521 * 185.45246 * 12 11 10 15 15 C 1.46504 * 119.99727 * 179.97438 * 14 12 11 16 16 H 1.08995 * 109.47262 * 324.99695 * 15 14 12 17 17 C 1.53002 * 109.47160 * 84.99875 * 15 14 12 18 18 C 1.53000 * 109.47148 * 180.02562 * 17 15 14 19 19 C 1.52996 * 109.46945 * 299.99604 * 18 17 15 20 20 H 1.09004 * 109.47467 * 300.00156 * 19 18 17 21 21 O 1.42901 * 109.47233 * 179.97438 * 19 18 17 22 22 C 1.53002 * 109.46874 * 60.00229 * 19 18 17 23 23 C 1.52996 * 109.47011 * 204.99526 * 15 14 12 24 24 C 1.39688 * 119.59825 * 180.02562 * 11 10 9 25 25 C 1.37783 * 119.92341 * 0.02562 * 24 11 10 26 26 C 1.38576 * 120.34022 * 359.97438 * 25 24 11 27 27 C 1.38011 * 120.40134 * 359.72296 * 26 25 24 28 28 C 1.36037 * 113.06761 * 0.42521 * 6 5 4 29 29 S 1.70452 * 110.81433 * 359.77090 * 28 6 5 30 30 H 0.96698 * 114.00128 * 60.00149 * 1 2 3 31 31 H 1.08995 * 109.46723 * 119.99784 * 2 1 3 32 32 H 1.48497 * 109.99884 * 298.67668 * 3 2 1 33 33 H 1.48498 * 110.00270 * 59.99955 * 3 2 1 34 34 H 1.08000 * 123.45384 * 359.97438 * 5 4 2 35 35 H 0.97001 * 119.99935 * 355.57413 * 9 7 6 36 36 H 0.96998 * 119.99973 * 359.97438 * 14 12 11 37 37 H 1.09004 * 109.46670 * 299.99796 * 17 15 14 38 38 H 1.08995 * 109.47180 * 59.99770 * 17 15 14 39 39 H 1.08997 * 109.46997 * 179.97438 * 18 17 15 40 40 H 1.08995 * 109.47340 * 59.99780 * 18 17 15 41 41 H 0.96697 * 113.99628 * 60.00036 * 21 19 18 42 42 H 1.09004 * 109.46670 * 179.97438 * 22 19 18 43 43 H 1.08999 * 109.47427 * 60.00397 * 22 19 18 44 44 H 1.09004 * 109.47467 * 300.00101 * 23 15 14 45 45 H 1.08997 * 109.47043 * 60.00256 * 23 15 14 46 46 H 1.07998 * 120.03846 * 180.02562 * 24 11 10 47 47 H 1.08007 * 119.83346 * 179.97438 * 25 24 11 48 48 H 1.07990 * 119.80045 * 180.02562 * 26 25 24 49 49 H 1.07998 * 119.96353 * 180.30069 * 27 26 25 50 50 H 1.08005 * 124.59572 * 179.77340 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6731 -1.9778 -1.5300 6 6 2.2779 -2.4010 -2.7714 7 6 2.1356 -3.7580 -3.3223 8 8 1.4766 -4.5897 -2.7278 9 7 2.7355 -4.0794 -4.4856 10 6 2.6781 -5.3866 -4.9604 11 6 3.7734 -5.9379 -5.6420 12 6 4.9919 -5.1356 -5.8599 13 8 5.0884 -4.0296 -5.3641 14 7 5.9981 -5.6285 -6.6089 15 6 7.2081 -4.8315 -6.8259 16 1 6.9412 -3.7769 -6.8936 17 6 8.1724 -5.0394 -5.6563 18 6 9.4357 -4.2066 -5.8826 19 6 10.1100 -4.6461 -7.1837 20 1 10.3773 -5.7007 -7.1163 21 8 11.2896 -3.8678 -7.3954 22 6 9.1457 -4.4381 -8.3533 23 6 7.8822 -5.2715 -8.1269 24 6 3.7027 -7.2507 -6.1139 25 6 2.5611 -7.9944 -5.9085 26 6 1.4809 -7.4470 -5.2349 27 6 1.5382 -6.1534 -4.7573 28 6 2.9968 -1.4173 -3.3766 29 16 2.9450 0.0205 -2.4625 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5138 0.8900 32 1 1.5879 2.4585 -1.2243 33 1 1.5615 2.4679 1.2084 34 1 1.0709 -2.6253 -0.9099 35 1 3.2073 -3.3997 -4.9919 36 1 5.9212 -6.5109 -7.0042 37 1 7.6921 -4.7259 -4.7294 38 1 8.4393 -6.0940 -5.5886 39 1 10.1224 -4.3544 -5.0492 40 1 9.1685 -3.1521 -5.9500 41 1 11.9471 -3.9507 -6.6912 42 1 9.6263 -4.7508 -9.2804 43 1 8.8785 -3.3835 -8.4208 44 1 8.1491 -6.3262 -8.0592 45 1 7.1953 -5.1234 -8.9601 46 1 4.5418 -7.6823 -6.6391 47 1 2.5079 -9.0092 -6.2743 48 1 0.5906 -8.0378 -5.0783 49 1 0.6940 -5.7355 -4.2291 50 1 3.5283 -1.5317 -4.3098 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11560734_6894386.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:16:50 Heat of formation + Delta-G solvation = -88.204007 kcal Electronic energy + Delta-G solvation = -35381.265843 eV Core-core repulsion = 30659.404610 eV Total energy + Delta-G solvation = -4721.861232 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.133 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -42.07098 -41.00181 -39.95508 -39.14621 -38.68971 -37.16079 -37.08572 -35.83518 -34.57686 -32.31633 -32.15856 -31.99706 -30.46979 -29.31779 -26.97076 -26.04198 -25.03718 -24.00208 -23.84144 -22.93346 -21.92644 -21.61280 -21.14352 -20.36645 -19.38872 -18.86024 -18.28799 -18.18671 -18.09129 -17.53184 -17.42358 -16.73012 -16.42823 -16.22472 -16.16128 -15.84491 -15.79335 -15.59339 -15.47590 -15.33169 -15.01059 -14.81816 -14.53347 -14.35913 -14.25244 -14.02572 -13.82656 -13.55270 -13.47290 -13.45009 -13.36886 -13.17823 -13.01864 -12.73436 -12.57081 -12.52861 -12.37801 -12.30184 -11.87032 -11.79892 -11.52639 -11.40617 -11.02055 -10.88064 -10.80500 -10.68490 -10.27096 -9.99866 -9.97646 -9.55600 -9.16559 -5.11461 -0.42838 -0.19943 0.26938 0.36037 0.70205 0.92593 1.19515 1.52134 1.78748 1.86559 1.95635 2.02857 2.31111 2.82948 3.10485 3.25026 3.43701 3.55090 3.58198 3.59500 3.69060 3.83614 3.89961 3.94435 4.00333 4.02020 4.07219 4.15682 4.23982 4.27621 4.28865 4.31674 4.38149 4.45459 4.47269 4.53485 4.71325 4.74273 4.79004 4.83936 4.90503 4.97205 5.00140 5.03443 5.09164 5.13892 5.17156 5.21352 5.25421 5.36586 5.38668 5.47303 5.89733 6.28730 6.30127 6.44334 6.62769 7.02932 7.13658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.032 4.032 3 Si 0.650 3.350 4 C -0.245 4.245 5 C -0.051 4.051 6 C -0.160 4.160 7 C 0.581 3.419 8 O -0.517 6.517 9 N -0.655 5.655 10 C 0.212 3.788 11 C -0.175 4.175 12 C 0.569 3.431 13 O -0.544 6.544 14 N -0.720 5.720 15 C 0.144 3.856 16 H 0.093 0.907 17 C -0.127 4.127 18 C -0.149 4.149 19 C 0.103 3.897 20 H 0.056 0.944 21 O -0.568 6.568 22 C -0.109 4.109 23 C -0.124 4.124 24 C -0.067 4.067 25 C -0.143 4.143 26 C -0.069 4.069 27 C -0.133 4.133 28 C -0.195 4.195 29 S 0.204 5.796 30 H 0.378 0.622 31 H 0.128 0.872 32 H -0.239 1.239 33 H -0.234 1.234 34 H 0.157 0.843 35 H 0.421 0.579 36 H 0.401 0.599 37 H 0.073 0.927 38 H 0.066 0.934 39 H 0.069 0.931 40 H 0.074 0.926 41 H 0.380 0.620 42 H 0.077 0.923 43 H 0.074 0.926 44 H 0.072 0.928 45 H 0.078 0.922 46 H 0.129 0.871 47 H 0.132 0.868 48 H 0.133 0.867 49 H 0.148 0.852 50 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.847 -1.221 -3.559 5.381 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.144 4.144 3 Si 0.548 3.452 4 C -0.362 4.362 5 C -0.080 4.080 6 C -0.178 4.178 7 C 0.369 3.631 8 O -0.393 6.393 9 N -0.303 5.303 10 C 0.114 3.886 11 C -0.181 4.181 12 C 0.358 3.642 13 O -0.423 6.423 14 N -0.371 5.371 15 C 0.040 3.960 16 H 0.111 0.889 17 C -0.166 4.166 18 C -0.187 4.187 19 C 0.044 3.956 20 H 0.074 0.926 21 O -0.374 6.374 22 C -0.147 4.147 23 C -0.162 4.162 24 C -0.086 4.086 25 C -0.162 4.162 26 C -0.088 4.088 27 C -0.153 4.153 28 C -0.333 4.333 29 S 0.471 5.529 30 H 0.226 0.774 31 H 0.146 0.854 32 H -0.162 1.162 33 H -0.157 1.157 34 H 0.175 0.825 35 H 0.264 0.736 36 H 0.237 0.763 37 H 0.091 0.909 38 H 0.085 0.915 39 H 0.088 0.912 40 H 0.093 0.907 41 H 0.227 0.773 42 H 0.096 0.904 43 H 0.093 0.907 44 H 0.091 0.909 45 H 0.097 0.903 46 H 0.147 0.853 47 H 0.150 0.850 48 H 0.151 0.849 49 H 0.166 0.834 50 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 3.660 1.231 -2.936 4.851 hybrid contribution -0.981 -2.149 -0.350 2.388 sum 2.679 -0.918 -3.286 4.338 Atomic orbital electron populations 1.86642 1.17151 1.79870 1.49224 1.24396 0.83865 1.09999 0.96131 0.95279 0.91730 0.75027 0.83127 1.24740 1.08830 0.99108 1.03487 1.21005 0.98129 0.94380 0.94447 1.20051 1.05461 0.94075 0.98231 1.17731 0.78483 0.87079 0.79793 1.90804 1.38869 1.50069 1.59578 1.43472 1.54450 1.09585 1.22817 1.17623 0.92281 0.84893 0.93768 1.19686 0.93808 0.95768 1.08832 1.18097 0.82557 0.85708 0.77820 1.90631 1.81042 1.20748 1.49834 1.45948 1.17319 1.21113 1.52736 1.21076 0.83566 0.96873 0.94512 0.88891 1.21868 0.95239 1.00530 0.98970 1.22230 0.97257 1.01248 0.98003 1.21849 0.85337 0.94072 0.94360 0.92609 1.86518 1.29574 1.70826 1.50453 1.21407 0.93912 1.01331 0.98096 1.21784 0.96965 1.00605 0.96895 1.21086 0.98248 0.92015 0.97270 1.21114 0.93514 1.00620 1.00907 1.21337 0.98624 0.94548 0.94312 1.21393 0.97477 0.95018 1.01392 1.25924 1.03272 0.98767 1.05320 1.83096 1.46127 1.11076 1.12640 0.77425 0.85442 1.16247 1.15684 0.82512 0.73649 0.76324 0.90856 0.91518 0.91220 0.90694 0.77260 0.90450 0.90704 0.90946 0.90323 0.85328 0.85016 0.84871 0.83448 0.80800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.65 12.85 -35.23 -0.45 -1.10 16 2 C -0.03 0.00 2.95 36.01 0.11 0.11 16 3 Si 0.65 -0.70 30.91 -169.99 -5.25 -5.96 16 4 C -0.25 -0.13 5.68 -36.18 -0.21 -0.34 16 5 C -0.05 -0.12 9.91 -39.02 -0.39 -0.50 16 6 C -0.16 -0.41 5.98 -104.64 -0.63 -1.04 16 7 C 0.58 2.49 7.63 -12.64 -0.10 2.40 16 8 O -0.52 -3.52 14.23 5.25 0.07 -3.45 16 9 N -0.66 -1.91 4.50 -10.74 -0.05 -1.96 16 10 C 0.21 0.62 6.30 -83.51 -0.53 0.09 16 11 C -0.18 -0.22 5.89 -104.81 -0.62 -0.84 16 12 C 0.57 0.73 7.71 -12.48 -0.10 0.64 16 13 O -0.54 -1.85 13.65 5.29 0.07 -1.78 16 14 N -0.72 1.09 5.03 -54.86 -0.28 0.81 16 15 C 0.14 -0.20 2.45 -67.93 -0.17 -0.37 16 16 H 0.09 0.02 7.58 -51.93 -0.39 -0.37 16 17 C -0.13 0.14 5.49 -26.73 -0.15 -0.01 16 18 C -0.15 0.21 5.54 -26.73 -0.15 0.06 16 19 C 0.10 -0.13 3.47 -26.73 -0.09 -0.22 16 20 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 21 O -0.57 -0.11 13.32 -35.23 -0.47 -0.58 16 22 C -0.11 0.16 5.57 -26.70 -0.15 0.01 16 23 C -0.12 0.36 5.39 -26.71 -0.14 0.21 16 24 C -0.07 0.07 9.52 -39.21 -0.37 -0.31 16 25 C -0.14 0.13 10.02 -39.62 -0.40 -0.27 16 26 C -0.07 -0.03 10.03 -39.54 -0.40 -0.42 16 27 C -0.13 -0.35 8.68 -39.43 -0.34 -0.69 16 28 C -0.19 -0.10 10.38 29.94 0.31 0.21 16 29 S 0.20 -0.14 20.18 -107.50 -2.17 -2.31 16 30 H 0.38 -0.64 8.70 45.56 0.40 -0.24 16 31 H 0.13 -0.11 7.96 -51.93 -0.41 -0.53 16 32 H -0.24 -0.09 7.11 56.52 0.40 0.31 16 33 H -0.23 -0.40 7.11 56.52 0.40 0.00 16 34 H 0.16 0.46 8.06 -52.49 -0.42 0.04 16 35 H 0.42 0.80 5.10 -40.82 -0.21 0.59 16 36 H 0.40 -1.54 6.66 -40.82 -0.27 -1.82 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 38 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.38 -1.34 9.08 45.56 0.41 -0.93 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 45 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 46 H 0.13 -0.53 6.44 -52.49 -0.34 -0.86 16 47 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 48 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 49 H 0.15 0.54 6.23 -52.49 -0.33 0.22 16 50 H 0.17 -0.17 7.02 -52.48 -0.37 -0.53 16 LS Contribution 419.71 15.07 6.32 6.32 Total: 0.00 -9.18 419.71 -12.47 -21.65 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -5.78 Total: -10.38 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: -4.49 Total: -1.27 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -0.32 Total: -1.15 kcal Atomic # 8 Polarization: -6.13 SS G_CDS: -0.78 Total: -6.91 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.25 Total: -5.96 kcal Atomic # 16 Polarization: -0.14 SS G_CDS: -2.17 Total: -2.31 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -9.18 -12.47 -21.65 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_6894386.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.552 kcal (2) G-P(sol) polarization free energy of solvation -9.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds