Wall clock time and date at job start Sat Mar 6 2021 16:17:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.36795 * 125.80149 * 2 1 4 4 C 1.47221 * 126.94805 * 359.97438 * 3 2 1 5 5 O 1.21627 * 119.99807 * 359.97438 * 4 3 2 6 6 N 1.34777 * 120.00076 * 180.02562 * 4 3 2 7 7 C 1.39196 * 119.99810 * 175.57552 * 6 4 3 8 8 C 1.40289 * 120.16415 * 215.52893 * 7 6 4 9 9 C 1.47506 * 120.20042 * 359.95442 * 8 7 6 10 10 O 1.21587 * 120.00267 * 5.45031 * 9 8 7 11 11 N 1.34777 * 119.99648 * 185.44587 * 9 8 7 12 12 C 1.46504 * 119.99987 * 180.02562 * 11 9 8 13 13 H 1.09001 * 109.46874 * 325.00065 * 12 11 9 14 14 C 1.53000 * 109.46951 * 85.00024 * 12 11 9 15 15 C 1.53003 * 109.46725 * 180.02562 * 14 12 11 16 16 C 1.53005 * 109.46940 * 299.99439 * 15 14 12 17 17 H 1.09001 * 109.47353 * 300.00447 * 16 15 14 18 18 O 1.42902 * 109.46886 * 180.02562 * 16 15 14 19 19 C 1.53000 * 109.46954 * 60.00701 * 16 15 14 20 20 C 1.52994 * 109.47227 * 205.00154 * 12 11 9 21 21 C 1.39701 * 119.59891 * 179.97438 * 8 7 6 22 22 C 1.37789 * 119.92217 * 359.97438 * 21 8 7 23 23 C 1.38580 * 120.33336 * 359.97438 * 22 21 8 24 24 C 1.38007 * 120.40808 * 359.74632 * 23 22 21 25 25 C 1.46697 * 106.10664 * 179.79440 * 3 2 1 26 26 C 1.34482 * 106.33570 * 0.33810 * 25 3 2 27 27 C 1.50696 * 125.57048 * 179.97438 * 26 25 3 28 28 O 1.42900 * 109.47253 * 119.69098 * 27 26 25 29 29 Si 1.86299 * 109.47281 * 359.69114 * 27 26 25 30 30 N 1.34654 * 125.80140 * 179.97438 * 2 1 3 31 31 H 1.08994 * 109.47246 * 270.02727 * 1 2 3 32 32 H 1.09003 * 109.46911 * 30.02994 * 1 2 3 33 33 H 1.08996 * 109.47103 * 150.02599 * 1 2 3 34 34 H 0.96997 * 120.00136 * 355.57518 * 6 4 3 35 35 H 0.97001 * 120.00653 * 0.02562 * 11 9 8 36 36 H 1.08999 * 109.47067 * 299.99949 * 14 12 11 37 37 H 1.08987 * 109.47263 * 60.00477 * 14 12 11 38 38 H 1.09005 * 109.46815 * 180.02562 * 15 14 12 39 39 H 1.08994 * 109.47728 * 60.00059 * 15 14 12 40 40 H 0.96693 * 113.99856 * 60.00737 * 18 16 15 41 41 H 1.08998 * 109.47561 * 179.97438 * 19 16 15 42 42 H 1.08995 * 109.47592 * 59.99410 * 19 16 15 43 43 H 1.09001 * 109.47121 * 299.99760 * 20 12 11 44 44 H 1.09002 * 109.47606 * 60.00031 * 20 12 11 45 45 H 1.07996 * 120.03631 * 180.02562 * 21 8 7 46 46 H 1.07996 * 119.83328 * 179.97438 * 22 21 8 47 47 H 1.07999 * 119.79352 * 179.97438 * 23 22 21 48 48 H 1.07999 * 119.96576 * 180.25777 * 24 23 22 49 49 H 1.08003 * 126.83220 * 180.22325 * 25 3 2 50 50 H 1.08999 * 109.47153 * 239.69118 * 27 26 25 51 51 H 0.96700 * 114.00344 * 300.00229 * 28 27 26 52 52 H 1.48501 * 110.00273 * 179.97438 * 29 27 26 53 53 H 1.48495 * 110.00172 * 301.31974 * 29 27 26 54 54 H 0.97003 * 124.85427 * 359.97438 * 30 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3073 1.1095 0.0000 4 6 1.8707 2.5155 -0.0005 5 8 0.6844 2.7838 -0.0015 6 7 2.7856 3.5052 -0.0010 7 6 2.3754 4.8320 -0.0945 8 6 3.1491 5.7606 -0.8067 9 6 4.4021 5.3368 -1.4596 10 8 4.7170 4.1624 -1.4665 11 7 5.1977 6.2513 -2.0486 12 6 6.4419 5.8304 -2.6976 13 1 6.8794 5.0014 -2.1413 14 6 6.1438 5.3826 -4.1299 15 6 7.4430 4.9424 -4.8074 16 6 8.4268 6.1140 -4.8338 17 1 7.9896 6.9431 -5.3901 18 8 9.6401 5.7030 -5.4671 19 6 8.7249 6.5618 -3.4015 20 6 7.4252 7.0022 -2.7239 21 6 2.7260 7.0891 -0.8934 22 6 1.5546 7.4788 -0.2814 23 6 0.7921 6.5588 0.4205 24 6 1.1942 5.2416 0.5101 25 6 3.6885 0.6151 0.0051 26 6 3.6097 -0.7274 0.0000 27 6 4.7820 -1.6743 0.0020 28 8 4.7280 -2.4968 1.1692 29 14 6.3688 -0.6982 0.0029 30 7 2.2948 -1.0921 0.0005 31 1 -0.3633 0.0005 1.0276 32 1 -0.3633 0.8897 -0.5143 33 1 -0.3633 -0.8902 -0.5134 34 1 3.7298 3.2929 0.0639 35 1 4.9467 7.1883 -2.0429 36 1 5.4432 4.5477 -4.1112 37 1 5.7064 6.2115 -4.6861 38 1 7.2307 4.6238 -5.8280 39 1 7.8802 4.1133 -4.2512 40 1 9.5260 5.4058 -6.3801 41 1 9.4261 7.3961 -3.4201 42 1 9.1620 5.7327 -2.8451 43 1 6.9877 7.8312 -3.2802 44 1 7.6376 7.3213 -1.7035 45 1 3.3160 7.8097 -1.4402 46 1 1.2291 8.5063 -0.3490 47 1 -0.1244 6.8737 0.8972 48 1 0.5923 4.5298 1.0554 49 1 4.5894 1.2108 0.0098 50 1 4.7427 -2.3030 -0.8876 51 1 4.7587 -2.0031 2.0001 52 1 7.5326 -1.6206 0.0055 53 1 6.4226 0.1849 -1.1897 54 1 1.9735 -2.0074 0.0013 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_9865296.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:17:17 Heat of formation + Delta-G solvation = -86.103258 kcal Electronic energy + Delta-G solvation = -38477.616758 eV Core-core repulsion = 33573.956985 eV Total energy + Delta-G solvation = -4903.659773 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.188 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -42.63579 -41.83944 -40.74370 -39.67857 -38.87113 -37.77362 -37.05884 -35.84876 -34.55482 -32.98410 -32.48667 -32.24830 -31.88829 -30.52129 -29.27952 -28.98379 -25.93334 -25.04534 -24.36631 -23.89224 -23.26993 -22.41371 -21.73958 -21.51960 -21.04304 -20.52769 -19.15801 -19.03115 -18.25349 -18.16466 -17.54124 -17.37097 -16.97308 -16.72570 -16.52778 -16.17048 -16.08545 -15.79735 -15.63155 -15.49638 -15.44305 -15.30475 -14.97906 -14.82095 -14.75386 -14.63441 -14.41382 -14.16545 -14.12231 -13.90999 -13.63566 -13.42878 -13.36758 -13.27389 -13.09387 -12.99501 -12.90371 -12.54868 -12.44825 -12.20295 -12.19628 -12.15044 -11.75394 -11.53360 -11.30256 -11.05016 -10.83286 -10.74516 -10.73120 -10.23869 -10.03978 -9.91316 -9.35541 -9.09045 -5.03222 -0.24319 0.24927 0.70125 1.09161 1.19135 1.61933 1.79809 1.85781 2.00547 2.02956 2.32252 2.40866 2.87464 3.25733 3.42581 3.46500 3.55864 3.66926 3.69885 3.77971 3.81173 3.92725 4.01319 4.08989 4.11568 4.13698 4.19721 4.28956 4.33563 4.36058 4.38388 4.40866 4.41725 4.44328 4.51388 4.63931 4.65132 4.66280 4.86482 4.86939 4.89534 4.95421 4.99864 5.07454 5.11000 5.13045 5.15398 5.23689 5.29392 5.30318 5.44975 5.47619 5.52762 5.55515 5.77050 5.95385 6.35696 6.42665 6.50759 6.63495 6.84088 7.07381 7.17625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.124 3.876 3 C -0.264 4.264 4 C 0.589 3.411 5 O -0.559 6.559 6 N -0.654 5.654 7 C 0.188 3.812 8 C -0.188 4.188 9 C 0.562 3.438 10 O -0.571 6.571 11 N -0.705 5.705 12 C 0.146 3.854 13 H 0.070 0.930 14 C -0.122 4.122 15 C -0.145 4.145 16 C 0.103 3.897 17 H 0.071 0.929 18 O -0.589 6.589 19 C -0.111 4.111 20 C -0.113 4.113 21 C -0.059 4.059 22 C -0.142 4.142 23 C -0.072 4.072 24 C -0.153 4.153 25 C -0.159 4.159 26 C -0.011 4.011 27 C -0.043 4.043 28 O -0.552 6.552 29 Si 0.787 3.213 30 N -0.524 5.524 31 H 0.089 0.911 32 H 0.082 0.918 33 H 0.088 0.912 34 H 0.422 0.578 35 H 0.415 0.585 36 H 0.046 0.954 37 H 0.081 0.919 38 H 0.075 0.925 39 H 0.055 0.945 40 H 0.393 0.607 41 H 0.079 0.921 42 H 0.059 0.941 43 H 0.093 0.907 44 H 0.087 0.913 45 H 0.163 0.837 46 H 0.161 0.839 47 H 0.150 0.850 48 H 0.130 0.870 49 H 0.156 0.844 50 H 0.115 0.885 51 H 0.398 0.602 52 H -0.285 1.285 53 H -0.293 1.293 54 H 0.431 0.569 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.389 5.214 0.891 5.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.003 3.997 3 C -0.274 4.274 4 C 0.382 3.618 5 O -0.439 6.439 6 N -0.300 5.300 7 C 0.091 3.909 8 C -0.193 4.193 9 C 0.352 3.648 10 O -0.452 6.452 11 N -0.357 5.357 12 C 0.042 3.958 13 H 0.088 0.912 14 C -0.161 4.161 15 C -0.183 4.183 16 C 0.045 3.955 17 H 0.089 0.911 18 O -0.397 6.397 19 C -0.149 4.149 20 C -0.151 4.151 21 C -0.078 4.078 22 C -0.160 4.160 23 C -0.091 4.091 24 C -0.173 4.173 25 C -0.183 4.183 26 C -0.120 4.120 27 C -0.154 4.154 28 O -0.360 6.360 29 Si 0.692 3.308 30 N -0.121 5.121 31 H 0.108 0.892 32 H 0.101 0.899 33 H 0.107 0.893 34 H 0.264 0.736 35 H 0.254 0.746 36 H 0.065 0.935 37 H 0.100 0.900 38 H 0.093 0.907 39 H 0.074 0.926 40 H 0.243 0.757 41 H 0.098 0.902 42 H 0.078 0.922 43 H 0.111 0.889 44 H 0.106 0.894 45 H 0.180 0.820 46 H 0.179 0.821 47 H 0.167 0.833 48 H 0.148 0.852 49 H 0.174 0.826 50 H 0.132 0.868 51 H 0.249 0.751 52 H -0.212 1.212 53 H -0.220 1.220 54 H 0.271 0.729 Dipole moment (debyes) X Y Z Total from point charges 0.813 4.211 0.592 4.329 hybrid contribution -0.576 -0.969 -0.995 1.504 sum 0.237 3.242 -0.403 3.276 Atomic orbital electron populations 1.20622 0.85681 1.04563 1.04324 1.20613 0.94453 0.85407 0.99249 1.19922 0.94099 0.91229 1.22159 1.17686 0.84835 0.84936 0.74380 1.90705 1.17348 1.84545 1.51321 1.43410 1.12042 1.03539 1.71001 1.17957 0.94924 0.83578 0.94466 1.19804 0.98264 0.96038 1.05217 1.18287 0.83439 0.85414 0.77696 1.90651 1.74506 1.18648 1.61435 1.45786 1.22418 1.11186 1.56268 1.21012 0.83913 0.98252 0.92672 0.91178 1.21797 0.97153 1.01428 0.95685 1.22182 0.95639 0.98965 1.01534 1.21916 0.84065 0.95205 0.94342 0.91126 1.86481 1.33101 1.87529 1.32634 1.21434 0.97758 1.01937 0.93820 1.21710 0.93656 0.96994 1.02708 1.21484 0.96496 0.93007 0.96824 1.21464 0.94761 1.01373 0.98425 1.21603 0.99769 0.91687 0.96052 1.21353 0.96793 0.97624 1.01546 1.21922 0.95900 0.93093 1.07396 1.20894 0.85465 0.94558 1.11112 1.24826 1.02189 0.96789 0.91552 1.86461 1.96863 1.36385 1.16314 0.93207 0.72306 0.78254 0.87069 1.41538 1.05120 1.09023 1.56410 0.89228 0.89891 0.89325 0.73583 0.74633 0.93548 0.90004 0.90684 0.92579 0.75723 0.90192 0.92203 0.88891 0.89399 0.81994 0.82123 0.83276 0.85242 0.82623 0.86767 0.75137 1.21193 1.22022 0.72950 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.19 9.88 71.24 0.70 0.51 16 2 C 0.12 0.62 7.18 41.79 0.30 0.92 16 3 C -0.26 -2.33 6.29 -19.04 -0.12 -2.45 16 4 C 0.59 7.16 7.64 86.60 0.66 7.82 16 5 O -0.56 -8.68 12.25 -4.12 -0.05 -8.73 16 6 N -0.65 -6.48 4.53 -306.06 -1.39 -7.87 16 7 C 0.19 1.60 6.30 38.62 0.24 1.84 16 8 C -0.19 -0.75 5.89 -19.98 -0.12 -0.87 16 9 C 0.56 2.70 7.71 86.69 0.67 3.37 16 10 O -0.57 -6.36 13.65 -3.99 -0.05 -6.41 16 11 N -0.71 1.64 5.03 -445.73 -2.24 -0.60 16 12 C 0.15 -0.20 2.45 44.99 0.11 -0.09 16 13 H 0.07 0.26 7.58 -2.39 -0.02 0.24 16 14 C -0.12 0.04 5.49 30.60 0.17 0.21 16 15 C -0.14 0.09 5.55 30.60 0.17 0.26 16 16 C 0.10 -0.17 3.47 30.60 0.11 -0.07 16 17 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 18 O -0.59 -0.84 13.32 -148.98 -1.98 -2.83 16 19 C -0.11 0.25 5.58 30.61 0.17 0.42 16 20 C -0.11 0.68 5.39 30.61 0.17 0.84 16 21 C -0.06 0.17 9.52 22.52 0.21 0.38 16 22 C -0.14 0.44 10.02 22.24 0.22 0.66 16 23 C -0.07 -0.07 10.03 22.30 0.22 0.15 16 24 C -0.15 -1.11 8.67 22.37 0.19 -0.92 16 25 C -0.16 -0.82 9.03 23.62 0.21 -0.61 16 26 C -0.01 -0.02 6.48 40.98 0.27 0.24 16 27 C -0.04 0.02 3.08 71.23 0.22 0.24 16 28 O -0.55 0.67 12.88 -148.98 -1.92 -1.25 16 29 Si 0.79 -0.18 30.56 68.60 2.10 1.92 16 30 N -0.52 -0.52 5.90 -171.05 -1.01 -1.53 16 31 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 32 H 0.08 0.57 6.47 -2.39 -0.02 0.56 16 33 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 34 H 0.42 3.76 5.72 -92.71 -0.53 3.22 16 35 H 0.42 -3.65 6.66 -92.71 -0.62 -4.26 16 36 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 37 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 38 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 39 H 0.06 0.17 8.14 -2.39 -0.02 0.16 16 40 H 0.39 -2.36 9.08 -74.06 -0.67 -3.03 16 41 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 42 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 43 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 44 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 45 H 0.16 -1.71 6.44 -2.91 -0.02 -1.73 16 46 H 0.16 -1.47 8.06 -2.91 -0.02 -1.50 16 47 H 0.15 -0.51 8.06 -2.91 -0.02 -0.54 16 48 H 0.13 1.34 6.23 -2.91 -0.02 1.32 16 49 H 0.16 0.51 5.86 -2.91 -0.02 0.49 16 50 H 0.11 -0.03 7.96 -2.39 -0.02 -0.05 16 51 H 0.40 -3.36 8.70 -74.06 -0.64 -4.00 16 52 H -0.28 -1.54 7.11 99.48 0.71 -0.83 16 53 H -0.29 -2.10 7.11 99.48 0.71 -1.40 16 54 H 0.43 -1.65 8.96 -92.71 -0.83 -2.48 16 Total: 0.00 -26.78 433.33 -4.02 -30.80 By element: Atomic # 1 Polarization: -14.12 SS G_CDS: -2.25 Total: -16.37 kcal Atomic # 6 Polarization: 8.08 SS G_CDS: 4.78 Total: 12.86 kcal Atomic # 7 Polarization: -5.36 SS G_CDS: -4.64 Total: -9.99 kcal Atomic # 8 Polarization: -15.21 SS G_CDS: -4.01 Total: -19.21 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: 2.10 Total: 1.92 kcal Total: -26.78 -4.02 -30.80 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_9865296.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.305 kcal (2) G-P(sol) polarization free energy of solvation -26.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.798 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.79 seconds