Wall clock time and date at job start Sat Mar 6 2021 19:53:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52993 * 109.46808 * 2 1 4 4 C 1.52996 * 109.47223 * 240.00293 * 2 1 3 5 5 O 1.42900 * 109.46927 * 120.00007 * 2 1 3 6 6 C 1.42899 * 113.99901 * 59.99876 * 5 2 1 7 7 H 1.09000 * 112.85142 * 341.19543 * 6 5 2 8 8 C 1.53788 * 113.61102 * 112.50257 * 6 5 2 9 9 C 1.53780 * 87.08026 * 139.98040 * 8 6 5 10 10 H 1.08996 * 113.69037 * 89.12375 * 9 8 6 11 11 N 1.46501 * 113.61608 * 220.02165 * 9 8 6 12 12 C 1.34774 * 119.99563 * 252.49781 * 11 9 8 13 13 O 1.21278 * 120.00283 * 359.97438 * 12 11 9 14 14 C 1.50704 * 119.99611 * 179.97438 * 12 11 9 15 15 O 1.42904 * 109.47033 * 179.97438 * 14 12 11 16 16 C 1.35895 * 117.00129 * 179.97438 * 15 14 12 17 17 C 1.38709 * 120.05826 * 179.97438 * 16 15 14 18 18 C 1.50705 * 120.02687 * 0.02562 * 17 16 15 19 19 O 1.42900 * 109.47128 * 285.02154 * 18 17 16 20 20 Si 1.86301 * 109.46951 * 165.02034 * 18 17 16 21 21 C 1.38164 * 119.94688 * 180.02562 * 17 16 15 22 22 C 1.38245 * 120.05645 * 359.97438 * 21 17 16 23 23 C 1.38290 * 120.10982 * 0.02562 * 22 21 17 24 24 C 1.38126 * 120.05768 * 0.02562 * 23 22 21 25 25 C 1.53779 * 113.61388 * 209.99738 * 6 5 2 26 26 H 1.08991 * 109.47368 * 300.00277 * 1 2 3 27 27 H 1.09000 * 109.46708 * 60.00116 * 1 2 3 28 28 H 1.09003 * 109.47263 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47290 * 180.02562 * 3 2 1 30 30 H 1.09008 * 109.47621 * 299.99705 * 3 2 1 31 31 H 1.09004 * 109.47279 * 59.99941 * 3 2 1 32 32 H 1.09010 * 109.47075 * 299.99773 * 4 2 1 33 33 H 1.09002 * 109.47532 * 59.99367 * 4 2 1 34 34 H 1.08995 * 109.47334 * 180.02562 * 4 2 1 35 35 H 1.08998 * 113.61229 * 25.43630 * 8 6 5 36 36 H 1.08994 * 113.61482 * 254.52818 * 8 6 5 37 37 H 0.97003 * 120.00134 * 72.49438 * 11 9 8 38 38 H 1.09001 * 109.47213 * 59.99895 * 14 12 11 39 39 H 1.09002 * 109.47209 * 299.99541 * 14 12 11 40 40 H 1.08997 * 109.46741 * 45.02259 * 18 17 16 41 41 H 0.96698 * 114.00095 * 59.99800 * 19 18 17 42 42 H 1.48502 * 109.99801 * 178.68216 * 20 18 17 43 43 H 1.48494 * 110.00156 * 300.00212 * 20 18 17 44 44 H 1.07997 * 119.97398 * 179.97438 * 21 17 16 45 45 H 1.07995 * 119.94685 * 179.74958 * 22 21 17 46 46 H 1.08005 * 119.97140 * 179.97438 * 23 22 21 47 47 H 1.07998 * 120.03128 * 180.02562 * 24 23 22 48 48 H 1.09006 * 113.61393 * 105.47353 * 25 6 5 49 49 H 1.09005 * 113.69256 * 334.58188 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0064 -0.6736 1.1668 6 6 1.5846 -2.0355 1.2645 7 1 0.7235 -2.2582 0.6344 8 6 2.7335 -3.0478 1.1213 9 6 2.0562 -3.8557 2.2409 10 1 1.3245 -4.5778 1.8788 11 7 3.0001 -4.4345 3.2003 12 6 3.2351 -5.7616 3.1974 13 8 2.6649 -6.4767 2.4009 14 6 4.2064 -6.3569 4.1839 15 8 4.2830 -7.7697 3.9836 16 6 5.1213 -8.4638 4.7975 17 6 5.2442 -9.8384 4.6587 18 6 4.4485 -10.5641 3.6044 19 8 3.0852 -10.6636 4.0210 20 14 5.1505 -12.2729 3.3632 21 6 6.0968 -10.5418 5.4877 22 6 6.8274 -9.8766 6.4547 23 6 6.7066 -8.5062 6.5951 24 6 5.8548 -7.7986 5.7694 25 6 1.4332 -2.5311 2.7123 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1300 1.4426 -0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6766 1.9563 0.8900 32 1 1.6768 -1.7489 -1.2493 33 1 1.6767 -0.2074 -2.1393 34 1 3.1300 -0.7216 -1.2490 35 1 3.7072 -2.6456 1.4009 36 1 2.7463 -3.5605 0.1595 37 1 3.4559 -3.8626 3.8376 38 1 3.8651 -6.1521 5.1986 39 1 5.1917 -5.9147 4.0357 40 1 4.5023 -10.0133 2.6654 41 1 2.6549 -9.8098 4.1659 42 1 4.3551 -13.0102 2.3489 43 1 6.5680 -12.1832 2.9300 44 1 6.1926 -11.6121 5.3803 45 1 7.4902 -10.4287 7.1044 46 1 7.2781 -7.9889 7.3515 47 1 5.7611 -6.7283 5.8792 48 1 0.3964 -2.6266 3.0350 49 1 2.0509 -1.9884 3.4279 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11572880_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:53:48 Heat of formation + Delta-G solvation = -98.417239 kcal Electronic energy + Delta-G solvation = -28946.869648 eV Core-core repulsion = 24841.969903 eV Total energy + Delta-G solvation = -4104.899744 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.75854 -41.23584 -40.21234 -38.69254 -38.04487 -37.29747 -34.83102 -33.54233 -32.70595 -31.32195 -29.59415 -28.50928 -28.45887 -26.79073 -26.56030 -25.33483 -23.51731 -22.59413 -21.78576 -21.30692 -20.75720 -19.47008 -18.33495 -18.18071 -17.95921 -17.56493 -17.28098 -16.98348 -16.63946 -16.23728 -16.05473 -15.62163 -15.52180 -15.44348 -15.16538 -14.98849 -14.62664 -14.49696 -14.23141 -14.00431 -13.82998 -13.62294 -13.45817 -13.40713 -13.20547 -12.97478 -12.77875 -12.76765 -12.72137 -12.57939 -12.40691 -12.26974 -12.18361 -11.88927 -11.86029 -11.41147 -11.13821 -10.98011 -10.88001 -10.49277 -10.18769 -9.97766 -9.26933 -4.78480 0.20896 0.35204 1.34522 1.39516 1.53429 1.75489 2.13539 2.39419 2.66145 2.72843 3.28625 3.41456 3.43949 3.61209 3.67795 3.74287 3.75234 3.78638 3.80540 3.83358 3.88125 4.00101 4.01041 4.08107 4.19570 4.23355 4.29464 4.46345 4.49487 4.53579 4.56939 4.60411 4.62566 4.68833 4.69665 4.78647 4.82217 4.88010 4.90871 4.91710 4.95464 5.06442 5.19984 5.22733 5.25673 5.32032 5.34726 5.46474 5.63697 6.15482 6.27828 6.31688 6.74845 7.01036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.359 6.359 6 C 0.065 3.935 7 H 0.096 0.904 8 C -0.167 4.167 9 C 0.125 3.875 10 H 0.120 0.880 11 N -0.714 5.714 12 C 0.517 3.483 13 O -0.512 6.512 14 C 0.040 3.960 15 O -0.291 6.291 16 C 0.134 3.866 17 C -0.140 4.140 18 C -0.073 4.073 19 O -0.536 6.536 20 Si 0.745 3.255 21 C -0.071 4.071 22 C -0.147 4.147 23 C -0.076 4.076 24 C -0.207 4.207 25 C -0.143 4.143 26 H 0.065 0.935 27 H 0.068 0.932 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.071 0.929 31 H 0.064 0.936 32 H 0.058 0.942 33 H 0.067 0.933 34 H 0.064 0.936 35 H 0.094 0.906 36 H 0.075 0.925 37 H 0.404 0.596 38 H 0.096 0.904 39 H 0.095 0.905 40 H 0.074 0.926 41 H 0.367 0.633 42 H -0.256 1.256 43 H -0.252 1.252 44 H 0.138 0.862 45 H 0.132 0.868 46 H 0.129 0.871 47 H 0.129 0.871 48 H 0.082 0.918 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.629 4.595 3.355 5.918 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.279 6.279 6 C 0.007 3.993 7 H 0.113 0.887 8 C -0.206 4.206 9 C 0.021 3.979 10 H 0.138 0.862 11 N -0.367 5.367 12 C 0.302 3.698 13 O -0.386 6.386 14 C -0.038 4.038 15 O -0.204 6.204 16 C 0.089 3.911 17 C -0.141 4.141 18 C -0.182 4.182 19 O -0.341 6.341 20 Si 0.643 3.357 21 C -0.088 4.088 22 C -0.165 4.165 23 C -0.094 4.094 24 C -0.226 4.226 25 C -0.181 4.181 26 H 0.085 0.915 27 H 0.087 0.913 28 H 0.078 0.922 29 H 0.082 0.918 30 H 0.090 0.910 31 H 0.083 0.917 32 H 0.078 0.922 33 H 0.086 0.914 34 H 0.083 0.917 35 H 0.112 0.888 36 H 0.094 0.906 37 H 0.239 0.761 38 H 0.114 0.886 39 H 0.113 0.887 40 H 0.092 0.908 41 H 0.215 0.785 42 H -0.181 1.181 43 H -0.177 1.177 44 H 0.155 0.845 45 H 0.149 0.851 46 H 0.147 0.853 47 H 0.147 0.853 48 H 0.100 0.900 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.673 2.888 2.124 3.956 hybrid contribution -0.086 2.213 -0.255 2.230 sum 1.586 5.101 1.869 5.659 Atomic orbital electron populations 1.22477 0.95534 1.02525 1.03167 1.21557 0.93183 0.93246 0.85412 1.21771 1.02012 0.93143 1.02679 1.22476 1.02309 1.00817 0.97845 1.88024 1.73751 1.23060 1.43023 1.23340 0.96975 0.82070 0.96963 0.88672 1.24048 1.00031 0.96929 0.99633 1.22259 0.92103 0.93742 0.89838 0.86225 1.45726 1.45854 1.07202 1.37949 1.20055 0.82670 0.82529 0.84554 1.90785 1.49061 1.59879 1.38879 1.22483 1.00318 0.81330 0.99703 1.86100 1.60281 1.18604 1.55392 1.18832 0.90876 0.90968 0.90425 1.19730 1.01991 0.90844 1.01502 1.25374 0.85055 1.12067 0.95664 1.86691 1.22565 1.34393 1.90443 0.93158 0.77772 0.77204 0.87537 1.20860 0.94638 0.99278 0.94050 1.21121 1.01259 0.94576 0.99577 1.21028 0.96441 0.94276 0.97666 1.21264 1.01759 1.00461 0.99098 1.23628 1.02423 0.94664 0.97402 0.91550 0.91272 0.92173 0.91767 0.90991 0.91728 0.92248 0.91436 0.91682 0.88751 0.90630 0.76104 0.88583 0.88738 0.90821 0.78478 1.18084 1.17674 0.84523 0.85052 0.85276 0.85270 0.89958 0.88462 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.21 8.38 37.16 0.31 0.52 16 2 C 0.10 -0.04 1.11 -90.62 -0.10 -0.14 16 3 C -0.14 0.11 8.84 37.15 0.33 0.44 16 4 C -0.18 0.15 8.38 37.16 0.31 0.46 16 5 O -0.36 -0.27 10.00 -35.23 -0.35 -0.62 16 6 C 0.07 -0.06 2.82 -25.92 -0.07 -0.13 16 7 H 0.10 -0.14 5.54 -51.93 -0.29 -0.43 16 8 C -0.17 0.12 7.71 -25.92 -0.20 -0.08 16 9 C 0.13 -0.12 4.24 -67.12 -0.28 -0.40 16 10 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 11 N -0.71 1.23 5.35 -53.02 -0.28 0.95 16 12 C 0.52 0.55 7.91 -10.99 -0.09 0.46 16 13 O -0.51 -3.00 16.10 -14.35 -0.23 -3.24 16 14 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 15 O -0.29 -0.70 8.57 -39.32 -0.34 -1.03 16 16 C 0.13 0.26 6.62 -39.21 -0.26 0.00 16 17 C -0.14 -0.33 5.28 -104.47 -0.55 -0.88 16 18 C -0.07 -0.23 2.33 36.01 0.08 -0.15 16 19 O -0.54 -2.21 12.65 -35.23 -0.45 -2.66 16 20 Si 0.74 1.15 30.17 -169.99 -5.13 -3.98 16 21 C -0.07 -0.05 8.66 -39.61 -0.34 -0.39 16 22 C -0.15 0.05 10.04 -39.56 -0.40 -0.35 16 23 C -0.08 0.04 10.04 -39.60 -0.40 -0.35 16 24 C -0.21 0.02 9.04 -39.43 -0.36 -0.33 16 25 C -0.14 0.28 7.66 -25.92 -0.20 0.08 16 26 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.06 -0.09 6.24 -51.93 -0.32 -0.41 16 29 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.07 -0.13 8.14 -51.92 -0.42 -0.56 16 31 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.06 -0.05 7.02 -51.92 -0.36 -0.42 16 33 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.09 -0.04 8.14 -51.93 -0.42 -0.47 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.40 -1.89 8.73 -40.82 -0.36 -2.24 16 38 H 0.10 -0.35 7.66 -51.93 -0.40 -0.75 16 39 H 0.09 -0.32 7.66 -51.93 -0.40 -0.71 16 40 H 0.07 0.32 7.83 -51.93 -0.41 -0.09 16 41 H 0.37 1.05 8.60 45.56 0.39 1.45 16 42 H -0.26 -1.16 7.11 56.52 0.40 -0.76 16 43 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 44 H 0.14 -0.21 5.13 -52.49 -0.27 -0.48 16 45 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 46 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 47 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 48 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 49 H 0.10 -0.22 8.12 -51.93 -0.42 -0.64 16 LS Contribution 395.18 15.07 5.96 5.96 Total: 0.00 -8.29 395.18 -10.67 -18.97 By element: Atomic # 1 Polarization: -5.41 SS G_CDS: -7.82 Total: -13.24 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: -2.03 Total: -1.10 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.28 Total: 0.95 kcal Atomic # 8 Polarization: -6.18 SS G_CDS: -1.37 Total: -7.55 kcal Atomic # 14 Polarization: 1.15 SS G_CDS: -5.13 Total: -3.98 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -8.29 -10.67 -18.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11572880_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.450 kcal (2) G-P(sol) polarization free energy of solvation -8.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.967 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds