Wall clock time and date at job start Sat Mar 6 2021 19:54:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35991 * 116.99815 * 2 1 4 4 C 1.38672 * 119.99862 * 180.02562 * 3 2 1 5 5 C 1.38156 * 119.99574 * 179.74664 * 4 3 2 6 6 C 1.50698 * 120.00004 * 180.25109 * 5 4 3 7 7 O 1.42907 * 109.47088 * 105.25551 * 6 5 4 8 8 Si 1.86305 * 109.47156 * 345.25891 * 6 5 4 9 9 C 1.38680 * 120.00177 * 0.50769 * 5 4 3 10 10 O 1.35982 * 120.00199 * 179.74555 * 9 5 4 11 11 C 1.42900 * 117.00105 * 179.72853 * 10 9 5 12 12 C 1.50696 * 109.46930 * 180.02562 * 11 10 9 13 13 O 1.21276 * 120.00387 * 359.97438 * 12 11 10 14 14 N 1.34776 * 119.99597 * 180.02562 * 12 11 10 15 15 C 1.46505 * 119.99692 * 179.97438 * 14 12 11 16 16 H 1.08999 * 112.84866 * 336.18994 * 15 14 12 17 17 C 1.53785 * 113.69022 * 107.46450 * 15 14 12 18 18 C 1.53781 * 87.07956 * 139.98873 * 17 15 14 19 19 H 1.09003 * 113.68735 * 89.12598 * 18 17 15 20 20 O 1.42898 * 113.61403 * 220.01586 * 18 17 15 21 21 C 1.42906 * 113.99821 * 247.50173 * 20 18 17 22 22 C 1.52997 * 109.47321 * 59.99868 * 21 20 18 23 23 C 1.52992 * 109.46831 * 299.99483 * 21 20 18 24 24 C 1.53006 * 109.46748 * 179.97438 * 21 20 18 25 25 C 1.53775 * 87.08349 * 334.56613 * 18 17 15 26 26 C 1.38718 * 119.99742 * 359.47105 * 9 5 4 27 27 C 1.38116 * 120.00171 * 0.27514 * 26 9 5 28 28 H 1.09000 * 109.47537 * 59.99575 * 1 2 3 29 29 H 1.09003 * 109.46887 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47058 * 299.99427 * 1 2 3 31 31 H 1.07993 * 120.00527 * 0.02562 * 4 3 2 32 32 H 1.08994 * 109.47473 * 225.25843 * 6 5 4 33 33 H 0.96693 * 114.00182 * 300.00266 * 7 6 5 34 34 H 1.48493 * 109.99833 * 58.67981 * 8 6 5 35 35 H 1.48503 * 109.99888 * 180.02562 * 8 6 5 36 36 H 1.08996 * 109.47086 * 59.99564 * 11 10 9 37 37 H 1.09003 * 109.46818 * 299.99694 * 11 10 9 38 38 H 0.96998 * 120.00390 * 359.97438 * 14 12 11 39 39 H 1.08997 * 113.61274 * 25.43883 * 17 15 14 40 40 H 1.09003 * 113.60951 * 254.53464 * 17 15 14 41 41 H 1.09002 * 109.47153 * 299.99798 * 22 21 20 42 42 H 1.09001 * 109.46832 * 179.97438 * 22 21 20 43 43 H 1.09004 * 109.47261 * 59.99970 * 22 21 20 44 44 H 1.09001 * 109.47066 * 180.02562 * 23 21 20 45 45 H 1.08996 * 109.47747 * 300.00121 * 23 21 20 46 46 H 1.09002 * 109.47103 * 60.00533 * 23 21 20 47 47 H 1.08993 * 109.46955 * 299.99993 * 24 21 20 48 48 H 1.09000 * 109.47050 * 59.99822 * 24 21 20 49 49 H 1.09001 * 109.47002 * 179.97438 * 24 21 20 50 50 H 1.09000 * 113.61888 * 139.98435 * 25 18 17 51 51 H 1.08999 * 113.61319 * 270.80320 * 25 18 17 52 52 H 1.08000 * 120.00023 * 180.29993 * 26 9 5 53 53 H 1.07997 * 120.00110 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4311 1.2843 -0.0005 5 6 4.0583 2.5153 -0.0058 6 6 5.5632 2.5943 -0.0121 7 8 6.0150 2.9704 -1.3147 8 14 6.2742 0.9315 0.4356 9 6 3.3029 3.6784 0.0000 10 8 3.9202 4.8900 0.0001 11 6 3.0802 6.0461 0.0002 12 6 3.9344 7.2876 -0.0004 13 8 5.1434 7.1919 -0.0005 14 7 3.3547 8.5043 0.0002 15 6 4.1851 9.7113 0.0001 16 1 5.1822 9.5390 0.4052 17 6 4.1865 10.4602 -1.3430 18 6 4.1381 11.7628 -0.5270 19 1 5.1220 12.1526 -0.2657 20 8 3.2780 12.7572 -1.0867 21 6 3.9653 13.9082 -1.5818 22 6 4.9418 13.4854 -2.6811 23 6 4.7384 14.5709 -0.4400 24 6 2.9512 14.9003 -2.1550 25 6 3.4823 10.9425 0.5962 26 6 1.9177 3.6057 0.0001 27 6 1.2907 2.3750 0.0001 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5137 0.8900 31 1 4.0194 0.3787 -0.0014 32 1 5.8911 3.3373 0.7148 33 1 5.7587 2.3530 -2.0134 34 1 5.8088 -0.0964 -0.5297 35 1 7.7578 0.9963 0.4335 36 1 2.4510 6.0378 0.8902 37 1 2.4509 6.0380 -0.8897 38 1 2.3877 8.5809 0.0006 39 1 3.2920 10.2861 -1.9409 40 1 5.1080 10.3351 -1.9116 41 1 5.6642 12.7785 -2.2732 42 1 5.4656 14.3635 -3.0591 43 1 4.3909 13.0133 -3.4946 44 1 5.2623 15.4490 -0.8175 45 1 4.0428 14.8721 0.3432 46 1 5.4609 13.8639 -0.0320 47 1 2.4007 14.4279 -2.9685 48 1 2.2552 15.2015 -1.3721 49 1 3.4753 15.7784 -2.5323 50 1 3.8352 11.2067 1.5931 51 1 2.3952 10.9014 0.5291 52 1 1.3294 4.5114 -0.0002 53 1 0.2122 2.3185 0.0006 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11572880_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:41 Heat of formation + Delta-G solvation = -125.397749 kcal Electronic energy + Delta-G solvation = -33088.477986 eV Core-core repulsion = 28508.188468 eV Total energy + Delta-G solvation = -4580.289518 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.197 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -41.82253 -41.32880 -40.44849 -39.73919 -38.46064 -38.06645 -36.96209 -34.81649 -33.50036 -32.82516 -31.04262 -29.48076 -28.41954 -28.37073 -27.95140 -26.69293 -26.64316 -25.25323 -23.55399 -22.43756 -21.79447 -21.23914 -20.69225 -19.66868 -18.80195 -18.44086 -17.95812 -17.76080 -17.48214 -17.26046 -17.07786 -16.63650 -16.32039 -16.10309 -16.02558 -15.93804 -15.62016 -15.34508 -15.20589 -15.06126 -14.66436 -14.42255 -14.34943 -14.15600 -14.00331 -13.56928 -13.49208 -13.44493 -13.31419 -13.14005 -13.01601 -12.87821 -12.69375 -12.66620 -12.48779 -12.43925 -12.34015 -12.13536 -11.87623 -11.78475 -11.75386 -11.42267 -11.33500 -10.98241 -10.57043 -10.43594 -10.15302 -10.12613 -8.79457 -4.96292 0.06299 0.36590 1.26256 1.41173 1.48024 1.55191 1.90482 2.34769 2.52474 2.55683 2.82485 3.39930 3.41586 3.50794 3.53851 3.67536 3.75263 3.77361 3.83887 3.89258 3.95493 3.96398 4.08344 4.08854 4.10486 4.14039 4.25341 4.27813 4.43402 4.43900 4.48407 4.60507 4.61740 4.67382 4.69304 4.71196 4.77671 4.78870 4.81000 4.89308 4.90131 4.96161 4.98767 4.99947 5.03366 5.15506 5.15955 5.22548 5.31304 5.34487 5.41961 5.45465 6.18963 6.35745 6.41147 6.47833 6.51366 7.10427 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.336 6.336 3 C 0.088 3.912 4 C -0.125 4.125 5 C -0.118 4.118 6 C -0.077 4.077 7 O -0.544 6.544 8 Si 0.775 3.225 9 C 0.101 3.899 10 O -0.309 6.309 11 C 0.036 3.964 12 C 0.513 3.487 13 O -0.570 6.570 14 N -0.698 5.698 15 C 0.123 3.877 16 H 0.100 0.900 17 C -0.165 4.165 18 C 0.063 3.937 19 H 0.098 0.902 20 O -0.373 6.373 21 C 0.099 3.901 22 C -0.175 4.175 23 C -0.178 4.178 24 C -0.138 4.138 25 C -0.129 4.129 26 C -0.164 4.164 27 C -0.157 4.157 28 H 0.065 0.935 29 H 0.113 0.887 30 H 0.069 0.931 31 H 0.146 0.854 32 H 0.106 0.894 33 H 0.382 0.618 34 H -0.273 1.273 35 H -0.300 1.300 36 H 0.127 0.873 37 H 0.120 0.880 38 H 0.421 0.579 39 H 0.094 0.906 40 H 0.063 0.937 41 H 0.057 0.943 42 H 0.075 0.925 43 H 0.057 0.943 44 H 0.076 0.924 45 H 0.063 0.937 46 H 0.061 0.939 47 H 0.058 0.942 48 H 0.061 0.939 49 H 0.082 0.918 50 H 0.089 0.911 51 H 0.107 0.893 52 H 0.165 0.835 53 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.864 2.200 2.110 9.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.250 6.250 3 C 0.043 3.957 4 C -0.143 4.143 5 C -0.119 4.119 6 C -0.185 4.185 7 O -0.352 6.352 8 Si 0.679 3.321 9 C 0.056 3.944 10 O -0.223 6.223 11 C -0.042 4.042 12 C 0.300 3.700 13 O -0.448 6.448 14 N -0.352 5.352 15 C 0.018 3.982 16 H 0.118 0.882 17 C -0.204 4.204 18 C 0.005 3.995 19 H 0.116 0.884 20 O -0.293 6.293 21 C 0.060 3.940 22 C -0.232 4.232 23 C -0.235 4.235 24 C -0.196 4.196 25 C -0.167 4.167 26 C -0.182 4.182 27 C -0.176 4.176 28 H 0.083 0.917 29 H 0.132 0.868 30 H 0.087 0.913 31 H 0.163 0.837 32 H 0.124 0.876 33 H 0.231 0.769 34 H -0.199 1.199 35 H -0.229 1.229 36 H 0.145 0.855 37 H 0.137 0.863 38 H 0.259 0.741 39 H 0.112 0.888 40 H 0.082 0.918 41 H 0.076 0.924 42 H 0.094 0.906 43 H 0.076 0.924 44 H 0.095 0.905 45 H 0.082 0.918 46 H 0.080 0.920 47 H 0.077 0.923 48 H 0.080 0.920 49 H 0.101 0.899 50 H 0.107 0.893 51 H 0.125 0.875 52 H 0.182 0.818 53 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -7.194 1.815 2.182 7.734 hybrid contribution -0.390 0.468 -1.386 1.514 sum -7.585 2.284 0.796 7.961 Atomic orbital electron populations 1.23345 0.76407 1.05543 1.02391 1.86081 1.23389 1.26481 1.89044 1.18952 0.91987 0.85207 0.99582 1.20271 0.92561 0.97049 1.04453 1.19366 0.96078 0.90548 1.05900 1.25126 0.92097 1.13548 0.87712 1.86657 1.78740 1.52700 1.17081 0.93999 0.76500 0.72442 0.89168 1.18842 0.91512 0.84527 0.99552 1.86207 1.35142 1.11869 1.89046 1.22709 0.92639 0.82204 1.06635 1.20598 0.88384 0.85548 0.75506 1.90771 1.16777 1.87334 1.49892 1.45603 1.11172 1.03842 1.74546 1.22149 0.96014 0.82663 0.97392 0.88168 1.24006 1.03038 0.95862 0.97480 1.23399 0.95074 0.86785 0.94264 0.88387 1.87998 1.34069 1.28875 1.78344 1.21675 0.92976 0.86019 0.93298 1.22457 0.99383 1.02426 0.98980 1.22455 1.00730 1.01642 0.98672 1.21784 0.98700 0.97938 1.01129 1.23549 1.02247 0.92232 0.98718 1.21382 0.92132 0.99990 1.04712 1.21400 1.01525 0.90883 1.03785 0.91671 0.86840 0.91264 0.83682 0.87582 0.76949 1.19886 1.22862 0.85512 0.86267 0.74079 0.88758 0.91801 0.92439 0.90639 0.92398 0.90534 0.91832 0.91997 0.92304 0.91997 0.89892 0.89256 0.87487 0.81789 0.82236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.34 -0.77 10.50 -93.45 -0.98 -1.75 16 3 C 0.09 0.22 6.69 22.49 0.15 0.37 16 4 C -0.13 -0.47 8.59 22.35 0.19 -0.28 16 5 C -0.12 -0.65 5.27 -19.78 -0.10 -0.75 16 6 C -0.08 -0.55 2.37 71.24 0.17 -0.38 16 7 O -0.54 -5.85 12.88 -148.98 -1.92 -7.77 16 8 Si 0.77 2.42 30.24 68.60 2.07 4.50 16 9 C 0.10 0.47 6.66 22.49 0.15 0.62 16 10 O -0.31 -2.35 9.00 -74.31 -0.67 -3.02 16 11 C 0.04 -0.06 5.22 71.23 0.37 0.31 16 12 C 0.51 2.27 7.91 87.66 0.69 2.96 16 13 O -0.57 -9.33 16.10 16.02 0.26 -9.08 16 14 N -0.70 1.76 5.36 -440.03 -2.36 -0.60 16 15 C 0.12 -0.04 4.24 45.52 0.19 0.16 16 16 H 0.10 0.41 7.46 -2.39 -0.02 0.39 16 17 C -0.16 -0.03 7.71 31.12 0.24 0.21 16 18 C 0.06 -0.06 2.82 31.12 0.09 0.03 16 19 H 0.10 -0.17 5.54 -2.39 -0.01 -0.19 16 20 O -0.37 -0.72 10.00 -148.98 -1.49 -2.21 16 21 C 0.10 -0.04 1.11 -10.79 -0.01 -0.05 16 22 C -0.18 0.16 8.38 71.98 0.60 0.76 16 23 C -0.18 0.39 8.38 71.98 0.60 0.99 16 24 C -0.14 0.20 8.84 71.98 0.64 0.84 16 25 C -0.13 0.48 7.66 31.12 0.24 0.71 16 26 C -0.16 0.26 9.03 22.36 0.20 0.46 16 27 C -0.16 0.26 9.03 22.36 0.20 0.47 16 28 H 0.06 -0.50 7.66 -2.39 -0.02 -0.52 16 29 H 0.11 -0.93 8.14 -2.39 -0.02 -0.95 16 30 H 0.07 -0.57 7.66 -2.39 -0.02 -0.58 16 31 H 0.15 0.34 4.86 -2.91 -0.01 0.33 16 32 H 0.11 1.00 7.82 -2.39 -0.02 0.98 16 33 H 0.38 1.40 8.70 -74.06 -0.64 0.75 16 34 H -0.27 -1.41 6.69 99.48 0.67 -0.75 16 35 H -0.30 -3.12 7.11 99.48 0.71 -2.41 16 36 H 0.13 -1.12 7.66 -2.39 -0.02 -1.14 16 37 H 0.12 -0.89 7.66 -2.39 -0.02 -0.91 16 38 H 0.42 -4.17 8.73 -92.71 -0.81 -4.98 16 39 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 40 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 41 H 0.06 -0.03 7.02 -2.39 -0.02 -0.05 16 42 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 43 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 44 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 45 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 46 H 0.06 -0.16 6.24 -2.39 -0.01 -0.17 16 47 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 48 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 49 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 50 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 51 H 0.11 -0.58 8.12 -2.39 -0.02 -0.60 16 52 H 0.16 -1.44 6.29 -2.91 -0.02 -1.46 16 53 H 0.16 -1.17 6.29 -2.91 -0.02 -1.19 16 Total: 0.00 -26.46 424.89 0.13 -26.33 By element: Atomic # 1 Polarization: -14.33 SS G_CDS: -0.52 Total: -14.84 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: 5.73 Total: 8.43 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -2.36 Total: -0.60 kcal Atomic # 8 Polarization: -19.02 SS G_CDS: -4.80 Total: -23.82 kcal Atomic # 14 Polarization: 2.42 SS G_CDS: 2.07 Total: 4.50 kcal Total: -26.46 0.13 -26.33 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11572880_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.066 kcal (2) G-P(sol) polarization free energy of solvation -26.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds