Wall clock time and date at job start Sat Mar 6 2021 14:18:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.46918 * 2 1 4 4 C 1.50702 * 109.46524 * 119.99689 * 2 1 3 5 5 C 1.38247 * 119.97070 * 244.99683 * 4 2 1 6 6 C 1.38283 * 120.11104 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05639 * 0.04377 * 6 5 4 8 8 C 1.38749 * 119.94660 * 359.97438 * 7 6 5 9 9 O 1.35901 * 120.05773 * 180.02562 * 8 7 6 10 10 C 1.42895 * 117.00296 * 359.97438 * 9 8 7 11 11 C 1.52992 * 109.47606 * 180.02562 * 10 9 8 12 12 C 1.52997 * 109.47482 * 180.02562 * 11 10 9 13 13 C 1.50701 * 109.47212 * 179.97438 * 12 11 10 14 14 O 1.21280 * 119.99781 * 0.02562 * 13 12 11 15 15 N 1.34780 * 119.99795 * 179.97438 * 13 12 11 16 16 C 1.46497 * 119.99566 * 180.02562 * 15 13 12 17 17 H 1.09003 * 112.85441 * 23.80863 * 16 15 13 18 18 C 1.53785 * 113.61126 * 155.00450 * 16 15 13 19 19 C 1.53782 * 87.08111 * 139.98069 * 18 16 15 20 20 H 1.09007 * 113.61317 * 89.11362 * 19 18 16 21 21 N 1.46901 * 113.61377 * 219.93206 * 19 18 16 22 22 H 1.00902 * 110.19331 * 59.20065 * 21 19 18 23 23 C 1.48533 * 110.16740 * 180.97007 * 21 19 18 24 24 C 1.55003 * 103.19337 * 158.22887 * 23 21 19 25 25 C 1.54588 * 102.96256 * 322.67591 * 24 23 21 26 26 C 1.47898 * 110.17238 * 297.42370 * 21 19 18 27 27 C 1.53783 * 87.08304 * 334.56769 * 19 18 16 28 28 C 1.38163 * 119.97186 * 65.30395 * 4 2 1 29 29 H 0.96695 * 114.00413 * 300.00623 * 1 2 3 30 30 H 1.09000 * 109.47153 * 239.99851 * 2 1 3 31 31 H 1.48499 * 109.99727 * 178.67957 * 3 2 1 32 32 H 1.48500 * 109.99922 * 299.99576 * 3 2 1 33 33 H 1.08002 * 119.94320 * 0.02562 * 5 4 2 34 34 H 1.07998 * 119.96999 * 180.02562 * 6 5 4 35 35 H 1.08006 * 120.02791 * 179.97438 * 7 6 5 36 36 H 1.09002 * 109.47063 * 60.00108 * 10 9 8 37 37 H 1.09001 * 109.46798 * 300.00375 * 10 9 8 38 38 H 1.09002 * 109.47103 * 59.99788 * 11 10 9 39 39 H 1.08998 * 109.46862 * 300.00600 * 11 10 9 40 40 H 1.09002 * 109.47153 * 59.99783 * 12 11 10 41 41 H 1.09001 * 109.46832 * 299.99974 * 12 11 10 42 42 H 0.96995 * 120.00011 * 0.02562 * 15 13 12 43 43 H 1.09004 * 113.61147 * 254.52872 * 18 16 15 44 44 H 1.08993 * 113.61377 * 25.34639 * 18 16 15 45 45 H 1.09003 * 110.66875 * 276.71259 * 23 21 19 46 46 H 1.08994 * 110.66897 * 39.84974 * 23 21 19 47 47 H 1.09003 * 110.74574 * 204.28231 * 24 23 21 48 48 H 1.09007 * 110.81611 * 81.10087 * 24 23 21 49 49 H 1.09004 * 110.30899 * 262.99368 * 25 24 23 50 50 H 1.09002 * 110.39607 * 140.87064 * 25 24 23 51 51 H 1.09004 * 109.91730 * 334.95303 * 26 21 19 52 52 H 1.09003 * 109.91560 * 96.24134 * 26 21 19 53 53 H 1.08994 * 113.61317 * 270.88884 * 27 19 18 54 54 H 1.08991 * 113.61491 * 139.98071 * 27 19 18 55 55 H 1.08000 * 120.03402 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6386 -0.0116 2.1910 6 6 3.1003 -0.6604 3.3216 7 6 2.8564 -2.0090 3.4934 8 6 2.1470 -2.7127 2.5307 9 8 1.9053 -4.0396 2.6977 10 6 2.4114 -4.6465 3.8883 11 6 2.0443 -6.1317 3.8995 12 6 2.5857 -6.7813 5.1745 13 6 2.2236 -8.2441 5.1858 14 8 1.5948 -8.7202 4.2645 15 7 2.5993 -9.0234 6.2193 16 6 2.2477 -10.4455 6.2300 17 1 2.0695 -10.8450 5.2316 18 6 3.1968 -11.3083 7.0784 19 6 1.9503 -12.0744 7.5517 20 1 1.6896 -12.9200 6.9151 21 7 1.9801 -12.4225 8.9786 22 1 2.0555 -11.5870 9.5394 23 6 0.7554 -13.1779 9.3471 24 6 1.1779 -13.9302 10.6348 25 6 2.6469 -14.3151 10.3453 26 6 3.1145 -13.3291 9.2589 27 6 1.1465 -10.8003 7.2431 28 6 1.6898 -2.0608 1.3948 29 1 -0.3934 0.4417 0.7649 30 1 1.7924 -0.5139 -0.8900 31 1 3.5346 1.7703 0.0322 32 1 1.5615 2.4678 -1.2085 33 1 2.8303 1.0430 2.0586 34 1 3.6523 -0.1122 4.0706 35 1 3.2176 -2.5154 4.3763 36 1 1.9750 -4.1574 4.7592 37 1 3.4959 -4.5403 3.9174 38 1 2.4811 -6.6205 3.0286 39 1 0.9600 -6.2381 3.8700 40 1 2.1486 -6.2924 6.0452 41 1 3.6701 -6.6748 5.2043 42 1 3.1025 -8.6426 6.9559 43 1 3.8829 -11.9140 6.4863 44 1 3.6982 -10.7545 7.8721 45 1 -0.0700 -12.4961 9.5520 46 1 0.4872 -13.8832 8.5606 47 1 0.5670 -14.8213 10.7794 48 1 1.1148 -13.2758 11.5042 49 1 2.7040 -15.3393 9.9765 50 1 3.2532 -14.2030 11.2442 51 1 3.3864 -13.8741 8.3548 52 1 3.9678 -12.7553 9.6205 53 1 1.0863 -10.1079 8.0827 54 1 0.1775 -10.9958 6.7840 55 1 1.1410 -2.6073 0.6421 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11618796_4549616.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:18:46 Heat of formation + Delta-G solvation = 42.591929 kcal Electronic energy + Delta-G solvation = -31050.513513 eV Core-core repulsion = 26752.027548 eV Total energy + Delta-G solvation = -4298.485965 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.216 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -43.05372 -41.32515 -40.91129 -39.26246 -38.87425 -37.32291 -34.98096 -34.81702 -32.86224 -32.48141 -31.23994 -30.72641 -28.55674 -26.99354 -26.89857 -25.64300 -24.08232 -23.74435 -23.42810 -22.35560 -21.90732 -21.70895 -21.37945 -19.24183 -18.95421 -18.52859 -18.14310 -17.83601 -17.49856 -17.18366 -16.89666 -16.72324 -16.56510 -16.31032 -16.14474 -16.05137 -15.60579 -15.42708 -15.01278 -14.81946 -14.73988 -14.45482 -14.27621 -14.21788 -14.17129 -13.73860 -13.58418 -13.36924 -13.28032 -13.08477 -12.90615 -12.76847 -12.71301 -12.61679 -12.49966 -12.36725 -12.31238 -12.26617 -12.05790 -11.93134 -11.68432 -11.64545 -11.62274 -11.01594 -10.52072 -10.18372 -9.95661 -9.26748 -5.02772 0.19333 0.38547 0.84355 1.26434 1.52805 1.61865 1.88778 1.97488 2.30989 2.34382 2.65981 2.66280 2.88119 3.17375 3.27660 3.48033 3.51962 3.59920 3.63326 3.66054 3.71244 3.82736 3.84825 3.85202 3.94707 3.96576 4.01978 4.06914 4.09060 4.18441 4.23485 4.30327 4.33618 4.37101 4.38582 4.43169 4.43445 4.49940 4.57234 4.61857 4.63000 4.66784 4.72510 4.80278 4.89492 4.96035 4.97527 5.00470 5.06977 5.08500 5.13159 5.14138 5.25765 5.36534 5.42795 5.44133 5.72337 6.40765 6.45523 6.71812 7.20348 Molecular weight = 362.22amu Principal moments of inertia in cm(-1) A = 0.036014 B = 0.001169 C = 0.001157 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 777.296819 B =23941.433898 C =24196.152933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.081 4.081 3 Si 0.787 3.213 4 C -0.086 4.086 5 C -0.160 4.160 6 C -0.073 4.073 7 C -0.203 4.203 8 C 0.117 3.883 9 O -0.340 6.340 10 C 0.054 3.946 11 C -0.104 4.104 12 C -0.131 4.131 13 C 0.512 3.488 14 O -0.588 6.588 15 N -0.706 5.706 16 C 0.104 3.896 17 H 0.093 0.907 18 C -0.140 4.140 19 C 0.032 3.968 20 H 0.169 0.831 21 N -0.368 5.368 22 H 0.439 0.561 23 C 0.005 3.995 24 C -0.150 4.150 25 C -0.149 4.149 26 C 0.001 3.999 27 C -0.157 4.157 28 C -0.154 4.154 29 H 0.396 0.604 30 H 0.101 0.899 31 H -0.283 1.283 32 H -0.304 1.304 33 H 0.147 0.853 34 H 0.160 0.840 35 H 0.158 0.842 36 H 0.085 0.915 37 H 0.081 0.919 38 H 0.055 0.945 39 H 0.059 0.941 40 H 0.131 0.869 41 H 0.126 0.874 42 H 0.423 0.577 43 H 0.105 0.895 44 H 0.136 0.864 45 H 0.144 0.856 46 H 0.135 0.865 47 H 0.094 0.906 48 H 0.095 0.905 49 H 0.086 0.914 50 H 0.092 0.908 51 H 0.134 0.866 52 H 0.148 0.852 53 H 0.128 0.872 54 H 0.086 0.914 55 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.106 -27.540 30.817 41.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.190 4.190 3 Si 0.693 3.307 4 C -0.086 4.086 5 C -0.177 4.177 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.072 3.928 9 O -0.255 6.255 10 C -0.020 4.020 11 C -0.142 4.142 12 C -0.170 4.170 13 C 0.300 3.700 14 O -0.467 6.467 15 N -0.359 5.359 16 C -0.002 4.002 17 H 0.111 0.889 18 C -0.179 4.179 19 C -0.071 4.071 20 H 0.186 0.814 21 N 0.052 4.948 22 H 0.277 0.723 23 C -0.116 4.116 24 C -0.188 4.188 25 C -0.187 4.187 26 C -0.120 4.120 27 C -0.196 4.196 28 C -0.173 4.173 29 H 0.246 0.754 30 H 0.118 0.882 31 H -0.210 1.210 32 H -0.232 1.232 33 H 0.164 0.836 34 H 0.178 0.822 35 H 0.175 0.825 36 H 0.103 0.897 37 H 0.099 0.901 38 H 0.074 0.926 39 H 0.078 0.922 40 H 0.149 0.851 41 H 0.144 0.856 42 H 0.262 0.738 43 H 0.123 0.877 44 H 0.154 0.846 45 H 0.162 0.838 46 H 0.153 0.847 47 H 0.113 0.887 48 H 0.114 0.886 49 H 0.105 0.895 50 H 0.111 0.889 51 H 0.153 0.847 52 H 0.166 0.834 53 H 0.146 0.854 54 H 0.105 0.895 55 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 4.121 -27.945 28.930 40.434 hybrid contribution 0.064 -0.400 -0.395 0.566 sum 4.185 -28.346 28.536 40.438 Atomic orbital electron populations 1.86480 1.17286 1.82234 1.50516 1.25312 0.85329 1.11350 0.97047 0.93633 0.77796 0.74537 0.84741 1.20184 0.98219 0.93353 0.96850 1.21193 1.00962 1.00512 0.95059 1.21329 0.96867 0.93765 0.97106 1.21596 1.03689 0.96150 1.00692 1.19142 0.95708 0.83109 0.94826 1.86054 1.74933 1.20272 1.44227 1.23056 0.99853 0.93323 0.85803 1.21178 1.01928 0.92364 0.98769 1.21552 1.05208 0.90827 0.99434 1.21046 0.77776 0.89746 0.81457 1.90784 1.41704 1.76377 1.37838 1.45715 1.57710 1.09085 1.23412 1.22289 0.96835 0.81145 0.99961 0.88862 1.23890 0.95770 0.97276 1.00923 1.24573 1.00964 1.01251 0.80292 0.81386 1.46155 1.15956 1.18381 1.14334 0.72299 1.24787 0.87108 0.99069 1.00685 1.22934 0.96139 1.02647 0.97050 1.22690 0.96335 1.00338 0.99347 1.24359 0.89401 0.94355 1.03891 1.24029 0.99641 0.94930 1.01030 1.20328 1.04579 0.94505 0.97843 0.75432 0.88162 1.20965 1.23214 0.83561 0.82233 0.82477 0.89664 0.90084 0.92587 0.92220 0.85135 0.85580 0.73798 0.87653 0.84563 0.83758 0.84702 0.88704 0.88589 0.89540 0.88934 0.84737 0.83403 0.85394 0.89512 0.86836 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.90 12.84 -148.98 -1.91 1.99 16 2 C -0.08 0.66 2.80 71.24 0.20 0.86 16 3 Si 0.79 -8.49 29.80 68.60 2.04 -6.45 16 4 C -0.09 0.73 5.35 -19.88 -0.11 0.62 16 5 C -0.16 2.01 8.67 22.28 0.19 2.20 16 6 C -0.07 1.10 10.04 22.25 0.22 1.33 16 7 C -0.20 2.92 9.04 22.36 0.20 3.12 16 8 C 0.12 -1.00 6.69 22.51 0.15 -0.85 16 9 O -0.34 2.98 10.14 -92.44 -0.94 2.04 16 10 C 0.05 -1.04 4.74 71.98 0.34 -0.70 16 11 C -0.10 2.01 4.87 30.59 0.15 2.16 16 12 C -0.13 3.91 5.70 29.85 0.17 4.08 16 13 C 0.51 -13.59 7.83 87.66 0.69 -12.91 16 14 O -0.59 8.21 15.58 -3.03 -0.05 8.17 16 15 N -0.71 27.17 5.35 -440.02 -2.36 24.81 16 16 C 0.10 -4.41 4.24 45.52 0.19 -4.22 16 17 H 0.09 -3.16 7.46 -2.39 -0.02 -3.17 16 18 C -0.14 7.55 6.97 31.12 0.22 7.76 16 19 C 0.03 -1.88 2.68 45.44 0.12 -1.76 16 20 H 0.17 -9.83 7.94 -2.38 -0.02 -9.85 16 21 N -0.37 23.29 0.57 -854.65 -0.49 22.81 16 22 H 0.44 -29.79 8.34 -89.69 -0.75 -30.54 16 23 C 0.00 -0.27 6.35 86.67 0.55 0.28 16 24 C -0.15 7.93 7.06 31.82 0.22 8.15 16 25 C -0.15 7.87 6.93 31.47 0.22 8.09 16 26 C 0.00 -0.06 5.95 86.45 0.51 0.45 16 27 C -0.16 7.93 7.53 31.12 0.23 8.16 16 28 C -0.15 0.85 9.63 22.37 0.22 1.07 16 29 H 0.40 -6.19 8.70 -74.06 -0.64 -6.84 16 30 H 0.10 -0.61 7.96 -2.39 -0.02 -0.63 16 31 H -0.28 1.86 7.11 99.48 0.71 2.57 16 32 H -0.30 0.74 7.11 99.48 0.71 1.44 16 33 H 0.15 -2.46 4.90 -2.91 -0.01 -2.47 16 34 H 0.16 -3.37 8.06 -2.91 -0.02 -3.39 16 35 H 0.16 -3.32 6.30 -2.91 -0.02 -3.34 16 36 H 0.09 -2.01 7.66 -2.39 -0.02 -2.03 16 37 H 0.08 -1.85 7.66 -2.39 -0.02 -1.87 16 38 H 0.06 -0.76 8.10 -2.39 -0.02 -0.78 16 39 H 0.06 -0.86 8.10 -2.39 -0.02 -0.88 16 40 H 0.13 -4.67 8.14 -2.39 -0.02 -4.69 16 41 H 0.13 -4.36 8.14 -2.39 -0.02 -4.38 16 42 H 0.42 -19.52 8.73 -92.71 -0.81 -20.33 16 43 H 0.10 -5.40 8.14 -2.39 -0.02 -5.42 16 44 H 0.14 -8.04 8.12 -2.39 -0.02 -8.06 16 45 H 0.14 -8.70 8.14 -2.39 -0.02 -8.72 16 46 H 0.13 -7.90 7.83 -2.39 -0.02 -7.92 16 47 H 0.09 -4.56 8.14 -2.39 -0.02 -4.58 16 48 H 0.10 -5.01 8.14 -2.38 -0.02 -5.03 16 49 H 0.09 -4.22 8.14 -2.39 -0.02 -4.24 16 50 H 0.09 -4.61 8.14 -2.39 -0.02 -4.63 16 51 H 0.13 -8.09 7.72 -2.38 -0.02 -8.10 16 52 H 0.15 -9.29 8.14 -2.39 -0.02 -9.31 16 53 H 0.13 -6.98 7.97 -2.39 -0.02 -7.00 16 54 H 0.09 -3.89 8.14 -2.39 -0.02 -3.91 16 55 H 0.11 -0.33 8.06 -2.91 -0.02 -0.35 16 Total: 1.00 -86.92 432.59 -0.26 -87.19 By element: Atomic # 1 Polarization: -167.19 SS G_CDS: -1.27 Total: -168.46 kcal Atomic # 6 Polarization: 23.20 SS G_CDS: 4.70 Total: 27.90 kcal Atomic # 7 Polarization: 50.46 SS G_CDS: -2.84 Total: 47.62 kcal Atomic # 8 Polarization: 15.09 SS G_CDS: -2.90 Total: 12.20 kcal Atomic # 14 Polarization: -8.49 SS G_CDS: 2.04 Total: -6.45 kcal Total: -86.92 -0.26 -87.19 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11618796_4549616.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.779 kcal (2) G-P(sol) polarization free energy of solvation -86.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.187 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds