Wall clock time and date at job start Sat Mar 6 2021 14:19:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35982 * 117.00509 * 2 1 4 4 C 1.38679 * 119.99866 * 180.27349 * 3 2 1 5 5 C 1.38154 * 119.99558 * 180.25511 * 4 3 2 6 6 C 1.50696 * 120.00038 * 179.76852 * 5 4 3 7 7 O 1.42900 * 109.47424 * 254.72109 * 6 5 4 8 8 Si 1.86301 * 109.47019 * 14.72003 * 6 5 4 9 9 C 1.38676 * 119.99970 * 359.48518 * 5 4 3 10 10 O 1.35982 * 119.99811 * 180.25513 * 9 5 4 11 11 C 1.42904 * 116.99964 * 180.02562 * 10 9 5 12 12 C 1.50692 * 109.47266 * 180.02562 * 11 10 9 13 13 O 1.21289 * 120.00291 * 359.97438 * 12 11 10 14 14 N 1.34779 * 120.00433 * 180.02562 * 12 11 10 15 15 C 1.46495 * 120.00507 * 179.97438 * 14 12 11 16 16 H 1.09007 * 112.85154 * 23.80322 * 15 14 12 17 17 C 1.53786 * 113.61677 * 154.99630 * 15 14 12 18 18 C 1.53779 * 87.07909 * 139.98388 * 17 15 14 19 19 H 1.08996 * 113.61591 * 89.11757 * 18 17 15 20 20 N 1.46900 * 113.61413 * 220.02364 * 18 17 15 21 21 H 1.00902 * 110.20162 * 56.36746 * 20 18 17 22 22 C 1.48533 * 110.17485 * 178.22219 * 20 18 17 23 23 C 1.54929 * 103.23123 * 158.27675 * 22 20 18 24 24 C 1.54590 * 102.92382 * 322.58398 * 23 22 20 25 25 C 1.47911 * 110.16835 * 294.59884 * 20 18 17 26 26 C 1.53783 * 113.61597 * 252.49789 * 15 14 12 27 27 C 1.38720 * 120.00150 * 0.24049 * 9 5 4 28 28 C 1.38108 * 120.00156 * 0.02562 * 27 9 5 29 29 H 1.09000 * 109.47244 * 300.00508 * 1 2 3 30 30 H 1.09004 * 109.46666 * 59.99886 * 1 2 3 31 31 H 1.08998 * 109.47875 * 179.97438 * 1 2 3 32 32 H 1.07999 * 120.00018 * 0.02562 * 4 3 2 33 33 H 1.08999 * 109.47516 * 134.71651 * 6 5 4 34 34 H 0.96704 * 113.99321 * 300.00052 * 7 6 5 35 35 H 1.48508 * 110.00145 * 60.00124 * 8 6 5 36 36 H 1.48501 * 110.00224 * 181.31842 * 8 6 5 37 37 H 1.09000 * 109.46962 * 300.00340 * 11 10 9 38 38 H 1.09000 * 109.47378 * 59.99828 * 11 10 9 39 39 H 0.96996 * 119.99531 * 359.97438 * 14 12 11 40 40 H 1.08994 * 113.61810 * 254.53325 * 17 15 14 41 41 H 1.09003 * 113.60735 * 25.35318 * 17 15 14 42 42 H 1.09004 * 110.66091 * 276.71041 * 22 20 18 43 43 H 1.08996 * 110.66857 * 39.83667 * 22 20 18 44 44 H 1.09001 * 110.72780 * 204.22327 * 23 22 20 45 45 H 1.09007 * 110.72372 * 80.94141 * 23 22 20 46 46 H 1.09000 * 110.31087 * 263.04407 * 24 23 22 47 47 H 1.08991 * 110.31483 * 140.87285 * 24 23 22 48 48 H 1.08997 * 109.91940 * 334.95194 * 25 20 18 49 49 H 1.08999 * 109.91365 * 96.24778 * 25 20 18 50 50 H 1.08995 * 113.61254 * 334.56264 * 26 15 14 51 51 H 1.08998 * 113.61265 * 105.47122 * 26 15 14 52 52 H 1.08002 * 120.00087 * 180.02562 * 27 9 5 53 53 H 1.07993 * 120.00105 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2840 -0.0057 5 6 4.0586 2.5149 -0.0004 6 6 5.5635 2.5937 -0.0014 7 8 6.0218 2.9669 1.2997 8 14 6.2721 0.9318 -0.4563 9 6 3.3034 3.6780 -0.0001 10 8 3.9208 4.8895 -0.0001 11 6 3.0810 6.0457 0.0008 12 6 3.9352 7.2871 0.0000 13 8 5.1443 7.1914 -0.0007 14 7 3.3557 8.5040 0.0011 15 6 4.1861 9.7108 0.0010 16 1 5.1829 9.5388 -0.4055 17 6 3.4828 10.9426 -0.5934 18 6 4.1385 11.7616 0.5309 19 1 5.1227 12.1510 0.2705 20 7 3.2539 12.7827 1.1079 21 1 2.4047 12.3564 1.4473 22 6 3.9467 13.4966 2.2108 23 6 3.1678 14.8320 2.3132 24 6 2.8512 15.1617 0.8364 25 6 2.9376 13.8141 0.0960 26 6 4.1875 10.4579 1.3451 27 6 1.9181 3.6055 -0.0001 28 6 1.2910 2.3750 0.0001 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3635 -1.0276 -0.0005 32 1 4.0194 0.3782 -0.0106 33 1 5.8880 3.3382 -0.7283 34 1 5.6914 3.8240 1.6021 35 1 5.8029 0.5322 -1.8074 36 1 7.7558 0.9877 -0.4298 37 1 2.4511 6.0379 -0.8888 38 1 2.4522 6.0374 0.8911 39 1 2.3888 8.5806 0.0021 40 1 3.8354 11.2083 -1.5898 41 1 2.3957 10.8990 -0.5266 42 1 3.8697 12.9341 3.1413 43 1 4.9905 13.6787 1.9554 44 1 3.7906 15.6088 2.7569 45 1 2.2489 14.6997 2.8844 46 1 3.5876 15.8598 0.4383 47 1 1.8478 15.5780 0.7483 48 1 3.7273 13.8526 -0.6544 49 1 1.9822 13.5888 -0.3777 50 1 3.2932 10.2826 1.9429 51 1 5.1091 10.3325 1.9134 52 1 1.3299 4.5113 -0.0003 53 1 0.2125 2.3186 0.0005 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11618796_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:19:27 Heat of formation + Delta-G solvation = 22.458643 kcal Electronic energy + Delta-G solvation = -32747.688532 eV Core-core repulsion = 28285.184950 eV Total energy + Delta-G solvation = -4462.503583 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.200 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.06970 -41.84977 -40.96798 -39.96809 -38.89285 -38.10202 -36.96707 -35.00664 -33.02631 -32.81867 -31.06078 -30.72950 -29.51171 -28.00418 -26.99764 -26.63883 -25.70791 -24.09730 -23.70386 -22.45582 -22.37754 -21.81253 -21.72571 -19.59308 -19.05836 -18.88789 -18.49611 -18.35086 -18.07716 -17.52068 -17.46276 -16.71593 -16.63768 -16.57420 -16.14623 -16.11567 -15.75651 -15.55270 -15.54092 -15.42563 -15.14456 -14.52679 -14.50358 -14.27102 -14.21480 -14.10352 -13.76153 -13.62828 -13.55952 -13.42189 -13.07939 -12.92250 -12.75297 -12.66680 -12.54159 -12.50106 -12.36474 -12.34715 -12.07513 -11.95388 -11.69334 -11.47450 -11.35799 -11.27403 -11.05087 -10.28730 -10.12854 -8.85187 -4.97241 0.03436 0.30444 0.82207 1.29136 1.34378 1.44686 1.53714 1.86173 2.29989 2.32587 2.48770 2.52001 2.67145 2.86411 3.16632 3.26807 3.44321 3.48719 3.53403 3.61762 3.70597 3.71504 3.81964 3.84404 3.94029 3.95767 4.01622 4.05194 4.06099 4.07108 4.10300 4.17092 4.23919 4.31548 4.38626 4.41592 4.42033 4.42427 4.56271 4.61730 4.67688 4.72234 4.77393 4.79901 4.88681 4.93175 4.94369 5.06391 5.07439 5.08052 5.13628 5.18572 5.31393 5.39385 6.09454 6.34598 6.42886 6.51767 7.05938 Molecular weight = 364.20amu Principal moments of inertia in cm(-1) A = 0.015996 B = 0.001799 C = 0.001668 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1750.050345 B =15560.614007 C =16786.225191 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.337 6.337 3 C 0.088 3.912 4 C -0.123 4.123 5 C -0.119 4.119 6 C -0.070 4.070 7 O -0.544 6.544 8 Si 0.795 3.205 9 C 0.094 3.906 10 O -0.317 6.317 11 C 0.028 3.972 12 C 0.516 3.484 13 O -0.568 6.568 14 N -0.698 5.698 15 C 0.107 3.893 16 H 0.095 0.905 17 C -0.140 4.140 18 C 0.031 3.969 19 H 0.170 0.830 20 N -0.368 5.368 21 H 0.439 0.561 22 C 0.004 3.996 23 C -0.149 4.149 24 C -0.149 4.149 25 C 0.001 3.999 26 C -0.157 4.157 27 C -0.155 4.155 28 C -0.163 4.163 29 H 0.069 0.931 30 H 0.067 0.933 31 H 0.111 0.889 32 H 0.146 0.854 33 H 0.067 0.933 34 H 0.373 0.627 35 H -0.268 1.268 36 H -0.296 1.296 37 H 0.121 0.879 38 H 0.128 0.872 39 H 0.426 0.574 40 H 0.106 0.894 41 H 0.139 0.861 42 H 0.145 0.855 43 H 0.135 0.865 44 H 0.094 0.906 45 H 0.096 0.904 46 H 0.086 0.914 47 H 0.092 0.908 48 H 0.135 0.865 49 H 0.148 0.852 50 H 0.130 0.870 51 H 0.088 0.912 52 H 0.174 0.826 53 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.251 34.185 4.004 36.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.251 6.251 3 C 0.043 3.957 4 C -0.141 4.141 5 C -0.120 4.120 6 C -0.178 4.178 7 O -0.350 6.350 8 Si 0.697 3.303 9 C 0.049 3.951 10 O -0.230 6.230 11 C -0.050 4.050 12 C 0.302 3.698 13 O -0.445 6.445 14 N -0.352 5.352 15 C 0.001 3.999 16 H 0.113 0.887 17 C -0.178 4.178 18 C -0.072 4.072 19 H 0.187 0.813 20 N 0.052 4.948 21 H 0.278 0.722 22 C -0.117 4.117 23 C -0.188 4.188 24 C -0.187 4.187 25 C -0.120 4.120 26 C -0.196 4.196 27 C -0.173 4.173 28 C -0.181 4.181 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.129 0.871 32 H 0.163 0.837 33 H 0.085 0.915 34 H 0.221 0.779 35 H -0.194 1.194 36 H -0.223 1.223 37 H 0.138 0.862 38 H 0.146 0.854 39 H 0.265 0.735 40 H 0.125 0.875 41 H 0.157 0.843 42 H 0.163 0.837 43 H 0.153 0.847 44 H 0.113 0.887 45 H 0.114 0.886 46 H 0.104 0.896 47 H 0.110 0.890 48 H 0.153 0.847 49 H 0.166 0.834 50 H 0.148 0.852 51 H 0.106 0.894 52 H 0.191 0.809 53 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -10.113 33.035 3.297 34.706 hybrid contribution -0.860 1.419 -0.329 1.692 sum -10.973 34.455 2.968 36.281 Atomic orbital electron populations 1.23346 0.76344 1.05540 1.02424 1.86098 1.23433 1.26667 1.88914 1.19047 0.91980 0.85477 0.99202 1.20205 0.92501 0.96980 1.04441 1.19412 0.95920 0.91090 1.05542 1.25262 0.92764 1.11668 0.88138 1.86702 1.74104 1.42284 1.31929 0.92168 0.76507 0.79845 0.81741 1.18663 0.91541 0.84188 1.00722 1.86084 1.35579 1.11900 1.89481 1.22844 0.93039 0.82240 1.06848 1.20436 0.88112 0.85819 0.75384 1.90821 1.16832 1.87376 1.49495 1.45484 1.11336 1.03482 1.74935 1.22331 0.96626 0.83085 0.97841 0.88653 1.23905 1.03507 0.90978 0.99415 1.24576 0.97833 0.87436 0.97356 0.81287 1.46146 1.17682 1.14983 1.15947 0.72234 1.24774 1.00899 0.94522 0.91514 1.22924 1.02166 0.96470 0.97196 1.22693 1.05366 0.96309 0.94365 1.24363 1.08896 0.86726 0.92034 1.24043 1.06709 0.91283 0.97595 1.21368 0.91958 0.99859 1.04142 1.21445 1.01593 0.91046 1.04049 0.91208 0.91435 0.87118 0.83691 0.91532 0.77860 1.19394 1.22316 0.86180 0.85442 0.73526 0.87530 0.84328 0.83746 0.84685 0.88732 0.88581 0.89566 0.88970 0.84715 0.83398 0.85202 0.89361 0.80853 0.82185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.31 9.81 113.37 1.11 0.80 16 2 O -0.34 3.29 10.50 -93.35 -0.98 2.31 16 3 C 0.09 -0.95 6.69 22.49 0.15 -0.80 16 4 C -0.12 1.10 8.59 22.36 0.19 1.30 16 5 C -0.12 1.10 5.28 -19.78 -0.10 1.00 16 6 C -0.07 0.48 2.33 71.23 0.17 0.65 16 7 O -0.54 3.13 12.65 -148.98 -1.89 1.24 16 8 Si 0.79 -5.42 30.17 68.60 2.07 -3.35 16 9 C 0.09 -1.34 6.62 22.49 0.15 -1.19 16 10 O -0.32 5.02 8.56 -74.31 -0.64 4.38 16 11 C 0.03 -0.78 5.22 71.23 0.37 -0.41 16 12 C 0.52 -13.70 7.91 87.65 0.69 -13.00 16 13 O -0.57 7.67 16.10 15.98 0.26 7.92 16 14 N -0.70 27.68 5.35 -440.03 -2.36 25.33 16 15 C 0.11 -4.67 4.24 45.52 0.19 -4.47 16 16 H 0.10 -3.33 7.47 -2.38 -0.02 -3.35 16 17 C -0.14 7.68 7.06 31.12 0.22 7.90 16 18 C 0.03 -1.84 2.63 45.44 0.12 -1.72 16 19 H 0.17 -10.04 7.99 -2.39 -0.02 -10.06 16 20 N -0.37 23.53 0.55 -854.78 -0.47 23.06 16 21 H 0.44 -30.25 8.38 -89.69 -0.75 -31.01 16 22 C 0.00 -0.23 6.30 86.65 0.55 0.31 16 23 C -0.15 7.97 7.06 31.80 0.22 8.20 16 24 C -0.15 7.94 6.93 31.47 0.22 8.16 16 25 C 0.00 -0.05 6.04 86.45 0.52 0.47 16 26 C -0.16 8.11 7.48 31.12 0.23 8.34 16 27 C -0.16 3.09 9.03 22.35 0.20 3.29 16 28 C -0.16 2.77 9.03 22.35 0.20 2.98 16 29 H 0.07 -1.43 7.66 -2.39 -0.02 -1.45 16 30 H 0.07 -1.36 7.66 -2.39 -0.02 -1.38 16 31 H 0.11 -2.13 8.14 -2.39 -0.02 -2.15 16 32 H 0.15 -1.50 5.12 -2.91 -0.01 -1.51 16 33 H 0.07 -0.37 7.82 -2.39 -0.02 -0.39 16 34 H 0.37 -3.72 8.60 -74.05 -0.64 -4.36 16 35 H -0.27 1.10 7.11 99.48 0.71 1.81 16 36 H -0.30 0.02 7.11 99.48 0.71 0.73 16 37 H 0.12 -4.00 7.66 -2.39 -0.02 -4.02 16 38 H 0.13 -4.44 7.66 -2.39 -0.02 -4.46 16 39 H 0.43 -20.39 8.73 -92.71 -0.81 -21.20 16 40 H 0.11 -5.57 8.14 -2.39 -0.02 -5.59 16 41 H 0.14 -8.39 8.12 -2.39 -0.02 -8.41 16 42 H 0.14 -8.78 8.14 -2.38 -0.02 -8.80 16 43 H 0.14 -7.97 7.87 -2.39 -0.02 -7.99 16 44 H 0.09 -4.57 8.14 -2.39 -0.02 -4.59 16 45 H 0.10 -5.05 8.14 -2.38 -0.02 -5.07 16 46 H 0.09 -4.23 8.14 -2.39 -0.02 -4.25 16 47 H 0.09 -4.62 8.14 -2.39 -0.02 -4.64 16 48 H 0.13 -8.17 7.72 -2.39 -0.02 -8.19 16 49 H 0.15 -9.38 8.14 -2.39 -0.02 -9.40 16 50 H 0.13 -7.25 8.01 -2.39 -0.02 -7.27 16 51 H 0.09 -4.05 8.14 -2.39 -0.02 -4.07 16 52 H 0.17 -5.12 6.29 -2.91 -0.02 -5.14 16 53 H 0.16 -3.61 6.29 -2.91 -0.02 -3.63 16 Total: 1.00 -87.37 418.66 0.19 -87.17 By element: Atomic # 1 Polarization: -168.63 SS G_CDS: -1.21 Total: -169.85 kcal Atomic # 6 Polarization: 16.38 SS G_CDS: 5.41 Total: 21.78 kcal Atomic # 7 Polarization: 51.21 SS G_CDS: -2.83 Total: 48.39 kcal Atomic # 8 Polarization: 19.10 SS G_CDS: -3.24 Total: 15.86 kcal Atomic # 14 Polarization: -5.42 SS G_CDS: 2.07 Total: -3.35 kcal Total: -87.37 0.19 -87.17 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11618796_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.633 kcal (2) G-P(sol) polarization free energy of solvation -87.366 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.174 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.459 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds