Wall clock time and date at job start Sat Mar 6 2021 14:19:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.47027 * 2 1 4 4 C 1.50697 * 109.47327 * 120.00234 * 2 1 3 5 5 C 1.38249 * 119.93760 * 245.02436 * 4 2 1 6 6 C 1.38188 * 120.06480 * 179.74700 * 5 4 2 7 7 C 1.38674 * 119.96044 * 0.47926 * 6 5 4 8 8 O 1.35916 * 120.06212 * 179.76911 * 7 6 5 9 9 C 1.42899 * 116.99629 * 359.72786 * 8 7 6 10 10 C 1.50703 * 109.46900 * 179.97438 * 9 8 7 11 11 O 1.21285 * 119.99788 * 0.02562 * 10 9 8 12 12 N 1.34775 * 120.00187 * 179.97438 * 10 9 8 13 13 C 1.46499 * 120.00054 * 179.97438 * 12 10 9 14 14 H 1.09001 * 112.84869 * 23.81095 * 13 12 10 15 15 C 1.53788 * 113.61138 * 155.00610 * 13 12 10 16 16 C 1.53782 * 87.07858 * 139.98577 * 15 13 12 17 17 H 1.08999 * 113.61786 * 89.11704 * 16 15 13 18 18 N 1.46905 * 113.60976 * 219.93333 * 16 15 13 19 19 H 1.00893 * 110.19403 * 56.37158 * 18 16 15 20 20 C 1.48541 * 110.16765 * 178.21595 * 18 16 15 21 21 C 1.54935 * 103.22217 * 158.28012 * 20 18 16 22 22 C 1.54594 * 102.92287 * 322.58275 * 21 20 18 23 23 C 1.47895 * 110.17104 * 294.59852 * 18 16 15 24 24 C 1.53776 * 87.08161 * 334.56667 * 16 15 13 25 25 C 1.38839 * 119.87867 * 359.49784 * 7 6 5 26 26 Br 1.89099 * 120.03533 * 180.29375 * 25 7 6 27 27 C 1.38196 * 119.92785 * 0.27212 * 25 7 6 28 28 H 0.96696 * 113.99927 * 299.99809 * 1 2 3 29 29 H 1.09001 * 109.46893 * 240.00077 * 2 1 3 30 30 H 1.48495 * 110.00138 * 178.68172 * 3 2 1 31 31 H 1.48501 * 109.99989 * 300.00126 * 3 2 1 32 32 H 1.07997 * 119.96313 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.01842 * 180.25438 * 6 5 4 34 34 H 1.09001 * 109.47641 * 60.00369 * 9 8 7 35 35 H 1.08999 * 109.47558 * 299.99705 * 9 8 7 36 36 H 0.96997 * 120.00085 * 0.02562 * 12 10 9 37 37 H 1.08992 * 113.61435 * 25.43604 * 15 13 12 38 38 H 1.09002 * 113.68495 * 254.53986 * 15 13 12 39 39 H 1.08998 * 110.66684 * 276.71233 * 20 18 16 40 40 H 1.08999 * 110.66451 * 39.84757 * 20 18 16 41 41 H 1.09006 * 110.72230 * 204.22705 * 21 20 18 42 42 H 1.09004 * 110.72624 * 80.94453 * 21 20 18 43 43 H 1.08998 * 110.31142 * 263.04069 * 22 21 20 44 44 H 1.09004 * 110.30721 * 140.87439 * 22 21 20 45 45 H 1.09003 * 109.92166 * 334.94954 * 23 18 16 46 46 H 1.09003 * 109.91954 * 96.24748 * 23 18 16 47 47 H 1.09000 * 113.61511 * 139.98778 * 24 16 15 48 48 H 1.09006 * 113.61771 * 270.88842 * 24 16 15 49 49 H 1.08000 * 119.97405 * 180.02562 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6383 -0.0109 2.1907 6 6 3.0957 -0.6586 3.3225 7 6 2.8538 -2.0137 3.4903 8 8 3.3068 -2.6538 4.6004 9 6 4.0303 -1.8701 5.5513 10 6 4.4491 -2.7424 6.7066 11 8 4.1570 -3.9196 6.7145 12 7 5.1489 -2.2148 7.7304 13 6 5.5554 -3.0628 8.8538 14 1 5.6156 -4.1180 8.5874 15 6 6.7962 -2.5440 9.5997 16 6 6.0930 -2.9652 10.9008 17 1 6.2995 -3.9941 11.1954 18 7 6.2719 -2.0097 12.0022 19 1 5.9536 -1.0937 11.7237 20 6 5.5288 -2.4684 13.2038 21 6 6.2412 -1.7295 14.3645 22 6 7.7248 -1.7532 13.9305 23 6 7.6941 -1.9551 12.4041 24 6 4.7645 -2.7956 10.1452 25 6 2.1433 -2.7142 2.5248 26 35 1.8038 -4.5605 2.7531 27 6 1.6840 -2.0607 1.3971 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 3.5345 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 2.8300 1.0436 2.0579 33 1 3.6443 -0.1105 4.0742 34 1 3.3942 -1.0641 5.9171 35 1 4.9152 -1.4472 5.0756 36 1 5.3828 -1.2735 7.7239 37 1 6.9409 -1.4674 9.5104 38 1 7.7026 -3.1118 9.3897 39 1 4.4814 -2.1723 13.1447 40 1 5.6184 -3.5481 13.3226 41 1 6.1055 -2.2656 15.3039 42 1 5.8802 -0.7044 14.4485 43 1 8.2464 -2.5808 14.4112 44 1 8.2063 -0.8070 14.1773 45 1 8.1900 -2.8901 12.1433 46 1 8.1881 -1.1190 11.9090 47 1 4.0299 -3.5674 10.3749 48 1 4.3537 -1.7877 10.2050 49 1 1.1308 -2.6048 0.6459 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11618796_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:19:42 Heat of formation + Delta-G solvation = 64.534214 kcal Electronic energy + Delta-G solvation = -30075.650179 eV Core-core repulsion = 25749.372938 eV Total energy + Delta-G solvation = -4326.277241 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.096 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.04426 -41.68678 -40.76322 -39.35381 -38.64530 -37.23546 -34.97317 -33.64076 -32.96020 -31.94301 -30.70955 -30.55884 -29.64943 -26.96798 -26.49269 -25.58999 -24.11735 -23.88708 -22.51141 -22.32142 -21.78385 -21.69014 -19.62711 -19.03514 -18.52800 -18.37223 -18.13029 -17.51829 -17.16689 -16.75021 -16.59251 -16.38236 -16.11750 -15.86661 -15.68975 -15.66595 -15.51994 -14.97516 -14.72797 -14.51260 -14.46063 -14.24242 -13.96714 -13.84500 -13.72325 -13.67255 -13.49732 -12.90363 -12.73422 -12.64707 -12.48451 -12.37875 -12.33021 -12.19867 -12.16127 -11.93713 -11.92275 -11.87002 -11.67417 -11.27222 -11.04313 -10.45491 -10.24712 -10.00099 -9.34940 -5.02587 -0.07931 0.09151 0.61355 0.84493 1.30690 1.38710 1.43847 1.63192 2.02228 2.32534 2.37202 2.44799 2.68314 2.89104 3.19155 3.29390 3.45728 3.47895 3.53642 3.62706 3.65269 3.73012 3.74978 3.81826 3.86482 3.97789 4.03151 4.03898 4.08269 4.09432 4.10305 4.30370 4.33989 4.41668 4.45654 4.47491 4.58385 4.61256 4.63985 4.75004 4.81331 4.82401 4.91760 4.96972 4.97554 5.08134 5.09907 5.15435 5.22698 5.35140 5.45482 6.04487 6.40028 6.77197 7.11457 Molecular weight = 412.10amu Principal moments of inertia in cm(-1) A = 0.011809 B = 0.001600 C = 0.001448 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2370.510001 B =17496.843873 C =19332.690779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.080 4.080 3 Si 0.793 3.207 4 C -0.153 4.153 5 C -0.054 4.054 6 C -0.184 4.184 7 C 0.152 3.848 8 O -0.307 6.307 9 C 0.023 3.977 10 C 0.515 3.485 11 O -0.567 6.567 12 N -0.697 5.697 13 C 0.107 3.893 14 H 0.094 0.906 15 C -0.139 4.139 16 C 0.030 3.970 17 H 0.169 0.831 18 N -0.367 5.367 19 H 0.439 0.561 20 C 0.004 3.996 21 C -0.149 4.149 22 C -0.149 4.149 23 C 0.001 3.999 24 C -0.157 4.157 25 C -0.146 4.146 26 Br -0.056 7.056 27 C -0.040 4.040 28 H 0.396 0.604 29 H 0.100 0.900 30 H -0.273 1.273 31 H -0.312 1.312 32 H 0.168 0.832 33 H 0.188 0.812 34 H 0.136 0.864 35 H 0.129 0.871 36 H 0.427 0.573 37 H 0.140 0.860 38 H 0.106 0.894 39 H 0.145 0.855 40 H 0.134 0.866 41 H 0.094 0.906 42 H 0.096 0.904 43 H 0.085 0.915 44 H 0.092 0.908 45 H 0.134 0.866 46 H 0.149 0.851 47 H 0.086 0.914 48 H 0.131 0.869 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.601 10.839 36.183 41.259 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.189 4.189 3 Si 0.698 3.302 4 C -0.155 4.155 5 C -0.071 4.071 6 C -0.203 4.203 7 C 0.104 3.896 8 O -0.219 6.219 9 C -0.055 4.055 10 C 0.301 3.699 11 O -0.444 6.444 12 N -0.352 5.352 13 C 0.001 3.999 14 H 0.112 0.888 15 C -0.177 4.177 16 C -0.073 4.073 17 H 0.186 0.814 18 N 0.053 4.947 19 H 0.278 0.722 20 C -0.117 4.117 21 C -0.188 4.188 22 C -0.188 4.188 23 C -0.120 4.120 24 C -0.196 4.196 25 C -0.226 4.226 26 Br 0.029 6.971 27 C -0.060 4.060 28 H 0.246 0.754 29 H 0.117 0.883 30 H -0.200 1.200 31 H -0.241 1.241 32 H 0.185 0.815 33 H 0.206 0.794 34 H 0.153 0.847 35 H 0.147 0.853 36 H 0.266 0.734 37 H 0.158 0.842 38 H 0.124 0.876 39 H 0.163 0.837 40 H 0.152 0.848 41 H 0.112 0.888 42 H 0.115 0.885 43 H 0.104 0.896 44 H 0.111 0.889 45 H 0.152 0.848 46 H 0.167 0.833 47 H 0.105 0.895 48 H 0.149 0.851 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 16.893 9.122 35.417 40.286 hybrid contribution -0.163 -0.215 -0.850 0.892 sum 16.730 8.907 34.568 39.422 Atomic orbital electron populations 1.86509 1.17483 1.82221 1.50561 1.25313 0.85261 1.11512 0.96781 0.93925 0.77674 0.73538 0.85024 1.20353 1.02738 0.93688 0.98717 1.21284 0.93444 1.00709 0.91673 1.21584 1.05818 0.91369 1.01549 1.18707 0.93154 0.91637 0.86085 1.86250 1.68752 1.38019 1.28893 1.23000 0.99695 0.94188 0.88599 1.20447 0.77900 0.87721 0.83874 1.90839 1.55332 1.18886 1.79382 1.45463 1.55746 1.14334 1.19645 1.22314 0.96302 0.96665 0.84592 0.88763 1.23903 0.98051 1.05847 0.89914 1.24577 1.00148 0.96908 0.85650 0.81406 1.46137 1.16126 1.17995 1.14454 0.72199 1.24773 1.00022 1.04999 0.81915 1.22926 0.93918 1.02953 0.98961 1.22695 0.97559 1.05514 0.92983 1.24359 0.79336 1.10316 0.98001 1.24043 0.95930 1.06429 0.93227 1.21274 1.09901 0.91854 0.99543 1.96774 1.94992 1.07709 1.97642 1.20871 0.95964 0.94590 0.94617 0.75398 0.88269 1.19954 1.24060 0.81493 0.79450 0.84662 0.85325 0.73406 0.84217 0.87568 0.83727 0.84755 0.88784 0.88540 0.89621 0.88950 0.84759 0.83327 0.89493 0.85080 0.85345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 6.72 12.83 -148.98 -1.91 4.81 16 2 C -0.08 1.13 2.80 71.23 0.20 1.33 16 3 Si 0.79 -13.97 29.80 68.60 2.04 -11.93 16 4 C -0.15 2.35 5.35 -19.85 -0.11 2.24 16 5 C -0.05 1.16 8.66 22.26 0.19 1.35 16 6 C -0.18 4.34 9.04 22.36 0.20 4.55 16 7 C 0.15 -2.37 6.68 22.52 0.15 -2.22 16 8 O -0.31 4.84 9.01 -73.56 -0.66 4.17 16 9 C 0.02 -0.66 5.22 71.24 0.37 -0.29 16 10 C 0.51 -13.82 7.91 87.66 0.69 -13.13 16 11 O -0.57 7.36 16.10 15.99 0.26 7.62 16 12 N -0.70 28.11 5.35 -440.03 -2.36 25.76 16 13 C 0.11 -4.71 4.24 45.52 0.19 -4.52 16 14 H 0.09 -3.30 7.46 -2.39 -0.02 -3.32 16 15 C -0.14 7.70 7.06 31.12 0.22 7.92 16 16 C 0.03 -1.80 2.63 45.44 0.12 -1.68 16 17 H 0.17 -9.99 7.99 -2.39 -0.02 -10.01 16 18 N -0.37 23.63 0.55 -854.78 -0.47 23.16 16 19 H 0.44 -30.49 8.39 -89.70 -0.75 -31.25 16 20 C 0.00 -0.24 6.30 86.65 0.55 0.31 16 21 C -0.15 8.02 7.06 31.80 0.22 8.24 16 22 C -0.15 7.99 6.93 31.47 0.22 8.21 16 23 C 0.00 -0.06 6.04 86.45 0.52 0.46 16 24 C -0.16 8.15 7.48 31.12 0.23 8.39 16 25 C -0.15 1.40 6.24 22.40 0.14 1.54 16 26 Br -0.06 0.29 33.16 -20.37 -0.68 -0.39 16 27 C -0.04 0.42 9.42 22.27 0.21 0.63 16 28 H 0.40 -8.28 8.70 -74.06 -0.64 -8.92 16 29 H 0.10 -1.14 7.96 -2.39 -0.02 -1.16 16 30 H -0.27 4.04 7.11 99.48 0.71 4.75 16 31 H -0.31 2.29 7.11 99.48 0.71 3.00 16 32 H 0.17 -4.67 4.90 -2.91 -0.01 -4.69 16 33 H 0.19 -6.39 6.30 -2.91 -0.02 -6.41 16 34 H 0.14 -5.02 7.65 -2.39 -0.02 -5.04 16 35 H 0.13 -4.58 7.67 -2.39 -0.02 -4.60 16 36 H 0.43 -20.93 8.73 -92.71 -0.81 -21.73 16 37 H 0.14 -8.55 8.12 -2.39 -0.02 -8.57 16 38 H 0.11 -5.59 8.14 -2.39 -0.02 -5.61 16 39 H 0.14 -8.83 8.14 -2.39 -0.02 -8.85 16 40 H 0.13 -7.95 7.87 -2.39 -0.02 -7.97 16 41 H 0.09 -4.56 8.14 -2.38 -0.02 -4.58 16 42 H 0.10 -5.11 8.14 -2.39 -0.02 -5.13 16 43 H 0.09 -4.22 8.14 -2.39 -0.02 -4.24 16 44 H 0.09 -4.66 8.14 -2.38 -0.02 -4.68 16 45 H 0.13 -8.18 7.72 -2.39 -0.02 -8.20 16 46 H 0.15 -9.49 8.14 -2.39 -0.02 -9.50 16 47 H 0.09 -4.00 8.14 -2.39 -0.02 -4.02 16 48 H 0.13 -7.39 8.01 -2.38 -0.02 -7.41 16 49 H 0.13 -1.08 8.06 -2.91 -0.02 -1.11 16 Total: 1.00 -92.11 410.74 -0.62 -92.73 By element: Atomic # 1 Polarization: -168.07 SS G_CDS: -1.17 Total: -169.25 kcal Atomic # 6 Polarization: 19.00 SS G_CDS: 4.33 Total: 23.32 kcal Atomic # 7 Polarization: 51.74 SS G_CDS: -2.83 Total: 48.92 kcal Atomic # 8 Polarization: 18.91 SS G_CDS: -2.32 Total: 16.59 kcal Atomic # 14 Polarization: -13.97 SS G_CDS: 2.04 Total: -11.93 kcal Atomic # 35 Polarization: 0.29 SS G_CDS: -0.68 Total: -0.39 kcal Total: -92.11 -0.62 -92.73 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11618796_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 157.263 kcal (2) G-P(sol) polarization free energy of solvation -92.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.155 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -92.728 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds