Wall clock time and date at job start Sat Mar 6 2021 14:07:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35655 * 116.99878 * 2 1 4 4 C 1.38398 * 120.12093 * 0.02562 * 3 2 1 5 5 C 1.38727 * 120.03291 * 180.22848 * 4 3 2 6 6 O 1.35715 * 119.86416 * 179.71662 * 5 4 3 7 7 C 1.42900 * 117.00160 * 0.02562 * 6 5 4 8 8 C 1.39142 * 120.27410 * 359.49534 * 5 4 3 9 9 C 1.50702 * 119.88362 * 180.25392 * 8 5 4 10 10 O 1.42909 * 109.46883 * 75.24884 * 9 8 5 11 11 Si 1.86295 * 109.47275 * 195.24555 * 9 8 5 12 12 H 1.48505 * 109.46719 * 60.00111 * 11 9 8 13 13 H 1.48492 * 109.47170 * 179.97438 * 11 9 8 14 14 H 1.48496 * 109.47323 * 300.00306 * 11 9 8 15 15 C 1.37584 * 120.23864 * 0.50175 * 8 5 4 16 16 C 1.39824 * 119.96527 * 359.75065 * 15 8 5 17 17 C 1.47299 * 120.13828 * 179.97438 * 16 15 8 18 18 O 1.21614 * 119.99875 * 145.82648 * 17 16 15 19 19 N 1.34779 * 119.99718 * 325.82679 * 17 16 15 20 20 C 1.46502 * 120.00366 * 5.16672 * 19 17 16 21 21 C 1.46507 * 119.99768 * 185.15779 * 19 17 16 22 22 Si 1.86300 * 109.46714 * 90.00317 * 21 19 17 23 23 C 1.86304 * 109.46934 * 60.00246 * 22 21 19 24 24 C 1.86302 * 109.47038 * 179.97438 * 22 21 19 25 25 C 1.86299 * 109.47337 * 300.00233 * 22 21 19 26 26 H 1.09000 * 109.46895 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.47552 * 299.99384 * 1 2 3 28 28 H 1.09001 * 109.47393 * 59.99965 * 1 2 3 29 29 H 1.08000 * 119.98592 * 359.95101 * 4 3 2 30 30 H 1.09001 * 109.47231 * 59.99108 * 7 6 5 31 31 H 1.08998 * 109.47464 * 179.97438 * 7 6 5 32 32 H 1.09001 * 109.47091 * 299.99858 * 7 6 5 33 33 H 1.08988 * 109.47141 * 315.25057 * 9 8 5 34 34 H 0.96702 * 113.99908 * 60.00453 * 10 9 8 35 35 H 1.08003 * 120.02255 * 179.72928 * 15 8 5 36 36 H 1.09000 * 109.47012 * 95.98911 * 20 19 17 37 37 H 1.08998 * 109.46801 * 215.99096 * 20 19 17 38 38 H 1.09001 * 109.46886 * 335.98867 * 20 19 17 39 39 H 1.08994 * 109.46875 * 210.00115 * 21 19 17 40 40 H 1.09001 * 109.47011 * 330.00487 * 21 19 17 41 41 H 1.08993 * 109.47321 * 59.99934 * 23 22 21 42 42 H 1.09002 * 109.46711 * 179.97438 * 23 22 21 43 43 H 1.08997 * 109.47121 * 299.99273 * 23 22 21 44 44 H 1.09001 * 109.46654 * 60.00191 * 24 22 21 45 45 H 1.09000 * 109.47033 * 180.02562 * 24 22 21 46 46 H 1.08997 * 109.47291 * 300.00671 * 24 22 21 47 47 H 1.08998 * 109.47348 * 59.99699 * 25 22 21 48 48 H 1.09002 * 109.47133 * 180.02562 * 25 22 21 49 49 H 1.09003 * 109.46541 * 299.99625 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 1.2935 2.3710 0.0005 5 6 1.9252 3.6061 -0.0043 6 8 1.1850 4.7436 -0.0095 7 6 -0.2360 4.5931 -0.0093 8 6 3.3144 3.6835 0.0010 9 6 3.9914 5.0299 0.0015 10 8 3.8939 5.6116 1.3032 11 14 5.7861 4.8227 -0.4531 12 1 5.8874 4.2182 -1.8058 13 1 6.4530 6.1495 -0.4532 14 1 6.4482 3.9354 0.5364 15 6 4.0723 2.5352 0.0005 16 6 3.4461 1.2851 0.0001 17 6 4.2539 0.0533 -0.0010 18 8 3.8589 -0.9333 0.5902 19 7 5.4307 0.0198 -0.6571 20 6 5.9608 1.2386 -1.2733 21 6 6.1798 -1.2356 -0.7540 22 14 5.6546 -2.1553 -2.2866 23 6 6.0005 -1.1083 -3.7883 24 6 6.6077 -3.7513 -2.4103 25 6 3.8311 -2.5257 -2.1945 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5137 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 0.2149 2.3165 0.0002 30 1 -0.5435 4.0477 0.8830 31 1 -0.7057 5.5767 -0.0133 32 1 -0.5430 4.0399 -0.8969 33 1 3.5054 5.6812 -0.7248 34 1 4.3062 5.0846 2.0014 35 1 5.1505 2.5994 0.0002 36 1 6.6684 1.7117 -0.5925 37 1 6.4672 0.9842 -2.2045 38 1 5.1414 1.9265 -1.4815 39 1 7.2466 -1.0188 -0.8080 40 1 5.9774 -1.8481 0.1246 41 1 7.0673 -0.8916 -3.8423 42 1 5.6936 -1.6466 -4.6850 43 1 5.4431 -0.1744 -3.7162 44 1 6.4057 -4.3640 -1.5317 45 1 6.3008 -4.2892 -3.3073 46 1 7.6745 -3.5342 -2.4644 47 1 3.2738 -1.5918 -2.1223 48 1 3.5240 -3.0643 -3.0910 49 1 3.6289 -3.1384 -1.3159 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:07:26 Heat of formation + Delta-G solvation = -126.244630 kcal Electronic energy + Delta-G solvation = -29890.121266 eV Core-core repulsion = 25943.109492 eV Total energy + Delta-G solvation = -3947.011774 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 341.166 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.13648 -40.52516 -39.85136 -38.44641 -36.99805 -36.32442 -32.22444 -32.06895 -29.60194 -29.22337 -28.84354 -28.45802 -28.32131 -28.00284 -26.94886 -25.98014 -23.81838 -22.79246 -20.73190 -19.68879 -18.69649 -18.06680 -17.91523 -17.30882 -17.02506 -16.76541 -16.49037 -16.33710 -16.10875 -15.86233 -15.66172 -15.51670 -15.01958 -14.46314 -14.23230 -14.15837 -14.06349 -14.00345 -13.91704 -13.75430 -13.61088 -13.53228 -13.30250 -13.19282 -13.01188 -12.87202 -12.78068 -12.74770 -12.60813 -12.53877 -12.21743 -12.06450 -11.80151 -11.68123 -11.46690 -10.89061 -10.74066 -10.56464 -10.37862 -9.83683 -9.22783 -9.00182 -0.11717 0.13221 1.08352 1.31527 1.40030 1.58257 1.79224 1.84770 1.90459 1.94647 2.08735 2.14766 2.25902 2.59785 2.68120 3.42985 3.49414 3.55590 3.75955 3.79313 3.95511 3.99988 4.07950 4.13047 4.15077 4.20934 4.23734 4.30016 4.39165 4.46594 4.51161 4.58893 4.61124 4.69878 4.71300 4.74953 4.76329 4.82950 4.91849 4.95973 4.98162 5.04059 5.07347 5.32929 5.44417 5.51341 5.55689 5.75765 6.02998 6.29316 6.45671 6.61546 7.38810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.283 6.283 3 C 0.230 3.770 4 C -0.312 4.312 5 C 0.223 3.777 6 O -0.294 6.294 7 C 0.021 3.979 8 C -0.200 4.200 9 C -0.060 4.060 10 O -0.534 6.534 11 Si 0.924 3.076 12 H -0.241 1.241 13 H -0.246 1.246 14 H -0.248 1.248 15 C -0.033 4.033 16 C -0.203 4.203 17 C 0.562 3.438 18 O -0.514 6.514 19 N -0.597 5.597 20 C 0.045 3.955 21 C -0.177 4.177 22 Si 0.992 3.008 23 C -0.447 4.447 24 C -0.446 4.446 25 C -0.438 4.438 26 H 0.107 0.893 27 H 0.059 0.941 28 H 0.057 0.943 29 H 0.145 0.855 30 H 0.059 0.941 31 H 0.107 0.893 32 H 0.058 0.942 33 H 0.118 0.882 34 H 0.373 0.627 35 H 0.149 0.851 36 H 0.060 0.940 37 H 0.081 0.919 38 H 0.088 0.912 39 H 0.083 0.917 40 H 0.095 0.905 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.069 0.931 44 H 0.071 0.929 45 H 0.071 0.929 46 H 0.069 0.931 47 H 0.065 0.935 48 H 0.063 0.937 49 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.821 1.771 -2.868 3.469 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.194 6.194 3 C 0.181 3.819 4 C -0.332 4.332 5 C 0.175 3.825 6 O -0.206 6.206 7 C -0.073 4.073 8 C -0.201 4.201 9 C -0.171 4.171 10 O -0.338 6.338 11 Si 0.746 3.254 12 H -0.164 1.164 13 H -0.169 1.169 14 H -0.172 1.172 15 C -0.051 4.051 16 C -0.207 4.207 17 C 0.351 3.649 18 O -0.390 6.390 19 N -0.331 5.331 20 C -0.098 4.098 21 C -0.345 4.345 22 Si 1.188 2.812 23 C -0.554 4.554 24 C -0.555 4.555 25 C -0.546 4.546 26 H 0.125 0.875 27 H 0.077 0.923 28 H 0.076 0.924 29 H 0.162 0.838 30 H 0.077 0.923 31 H 0.125 0.875 32 H 0.077 0.923 33 H 0.136 0.864 34 H 0.220 0.780 35 H 0.166 0.834 36 H 0.078 0.922 37 H 0.100 0.900 38 H 0.107 0.893 39 H 0.101 0.899 40 H 0.114 0.886 41 H 0.088 0.912 42 H 0.089 0.911 43 H 0.088 0.912 44 H 0.090 0.910 45 H 0.090 0.910 46 H 0.088 0.912 47 H 0.084 0.916 48 H 0.082 0.918 49 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.334 1.618 -3.082 3.497 hybrid contribution -0.737 -0.317 0.427 0.909 sum -1.071 1.301 -2.655 3.145 Atomic orbital electron populations 1.23220 0.77955 1.04824 1.01410 1.86290 1.21485 1.25400 1.86210 1.18631 0.90434 0.84354 0.88450 1.21286 1.01069 0.91511 1.19310 1.18666 0.90347 0.84659 0.88863 1.86162 1.19349 1.28416 1.86628 1.23208 0.77926 1.04623 1.01579 1.19422 0.90922 0.96261 1.13498 1.24714 1.10024 0.92872 0.89518 1.86561 1.81949 1.49276 1.16045 0.86174 0.75709 0.81870 0.81602 1.16367 1.16912 1.17170 1.21383 1.00251 0.90151 0.93364 1.18933 0.90708 0.93758 1.17344 1.17800 0.80632 0.87492 0.79023 1.90805 1.70037 1.35730 1.42390 1.47275 1.21079 1.09830 1.54875 1.22654 1.00239 0.87898 0.99003 1.26531 0.99330 0.91745 1.16943 0.79711 0.68367 0.66958 0.66197 1.26142 1.04770 1.09568 1.14953 1.26065 1.08469 1.16162 1.04766 1.26022 1.19342 1.05115 1.04111 0.87507 0.92270 0.92404 0.83772 0.92261 0.87502 0.92327 0.86373 0.78015 0.83366 0.92211 0.90040 0.89336 0.89871 0.88648 0.91231 0.91077 0.91229 0.91013 0.91031 0.91206 0.91564 0.91821 0.90870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.99 9.10 -36.82 -0.33 -1.32 16 3 C 0.23 0.69 6.66 -38.73 -0.26 0.43 16 4 C -0.31 -0.33 8.01 -39.34 -0.31 -0.65 16 5 C 0.22 0.33 6.67 -39.07 -0.26 0.07 16 6 O -0.29 -0.35 9.79 -18.85 -0.18 -0.53 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.20 -0.21 5.27 -104.52 -0.55 -0.76 16 9 C -0.06 -0.01 2.37 36.01 0.09 0.08 16 10 O -0.53 -0.55 12.88 -35.23 -0.45 -1.01 16 11 Si 0.92 -0.92 24.65 -169.99 -4.19 -5.11 16 12 H -0.24 0.41 7.11 56.52 0.40 0.81 16 13 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 14 H -0.25 0.36 6.73 56.52 0.38 0.74 16 15 C -0.03 -0.04 6.03 -39.23 -0.24 -0.27 16 16 C -0.20 -0.64 5.44 -104.83 -0.57 -1.21 16 17 C 0.56 2.41 6.81 -12.58 -0.09 2.32 16 18 O -0.51 -3.79 15.38 -12.89 -0.20 -3.99 16 19 N -0.60 -0.93 2.38 -120.40 -0.29 -1.21 16 20 C 0.04 -0.04 8.37 59.85 0.50 0.46 16 21 C -0.18 -0.06 4.70 59.85 0.28 0.23 16 22 Si 0.99 -0.90 12.39 -169.99 -2.11 -3.00 16 23 C -0.45 0.52 7.91 101.05 0.80 1.32 16 24 C -0.45 0.31 8.65 101.05 0.87 1.19 16 25 C -0.44 -0.78 8.59 101.05 0.87 0.09 16 26 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 27 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 28 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 29 H 0.14 -0.18 4.50 -52.49 -0.24 -0.42 16 30 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 31 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 32 H 0.06 -0.19 7.65 -51.93 -0.40 -0.59 16 33 H 0.12 -0.02 7.81 -51.94 -0.41 -0.43 16 34 H 0.37 -0.80 8.70 45.56 0.40 -0.41 16 35 H 0.15 -0.06 1.97 -52.48 -0.10 -0.17 16 36 H 0.06 -0.13 7.32 -51.93 -0.38 -0.51 16 37 H 0.08 -0.22 6.52 -51.93 -0.34 -0.56 16 38 H 0.09 -0.10 4.31 -51.93 -0.22 -0.32 16 39 H 0.08 -0.15 7.89 -51.93 -0.41 -0.56 16 40 H 0.10 0.17 7.18 -51.93 -0.37 -0.20 16 41 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 42 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 43 H 0.07 -0.07 7.30 -51.93 -0.38 -0.45 16 44 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 45 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 46 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 47 H 0.07 0.21 7.78 -51.93 -0.40 -0.19 16 48 H 0.06 0.06 7.96 -51.93 -0.41 -0.35 16 49 H 0.07 0.23 7.96 -51.93 -0.41 -0.19 16 LS Contribution 386.53 15.07 5.82 5.82 Total: 0.00 -8.27 386.53 -5.82 -14.09 By element: Atomic # 1 Polarization: -1.94 SS G_CDS: -7.00 Total: -8.95 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: 3.11 Total: 5.21 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.29 Total: -1.21 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.17 Total: -6.85 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: -6.30 Total: -8.11 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -8.27 -5.82 -14.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.154 kcal (2) G-P(sol) polarization free energy of solvation -8.271 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.090 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds