Wall clock time and date at job start Sat Mar 6 2021 14:47:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37868 * 126.45462 * 2 1 4 4 C 1.46684 * 126.23441 * 0.02562 * 3 2 1 5 5 O 1.21693 * 119.99886 * 334.07564 * 4 3 2 6 6 N 1.34774 * 119.99842 * 154.07318 * 4 3 2 7 7 C 1.46503 * 120.00125 * 4.90270 * 6 4 3 8 8 C 1.46503 * 120.00232 * 184.89828 * 6 4 3 9 9 Si 1.86292 * 109.46776 * 90.00048 * 8 6 4 10 10 C 1.86299 * 109.47165 * 60.00541 * 9 8 6 11 11 C 1.86307 * 109.46855 * 180.02562 * 9 8 6 12 12 C 1.86300 * 109.47495 * 300.00359 * 9 8 6 13 13 N 1.37648 * 107.53400 * 179.97438 * 3 2 1 14 14 C 1.35534 * 108.64509 * 0.02562 * 13 3 2 15 15 C 1.50699 * 125.56862 * 180.26499 * 14 13 3 16 16 O 1.42895 * 109.46776 * 299.71762 * 15 14 13 17 17 Si 1.86297 * 109.47417 * 179.71592 * 15 14 13 18 18 H 1.48501 * 109.47143 * 59.99698 * 17 15 14 19 19 H 1.48497 * 109.47071 * 180.02562 * 17 15 14 20 20 H 1.48505 * 109.47041 * 300.00178 * 17 15 14 21 21 C 1.35460 * 108.86950 * 359.97438 * 14 13 3 22 22 H 1.08998 * 109.47190 * 269.99847 * 1 2 3 23 23 H 1.08995 * 109.47382 * 29.99740 * 1 2 3 24 24 H 1.08997 * 109.47168 * 149.99760 * 1 2 3 25 25 H 1.09006 * 109.47368 * 95.63349 * 7 6 4 26 26 H 1.08997 * 109.47452 * 215.63270 * 7 6 4 27 27 H 1.09000 * 109.47159 * 335.63830 * 7 6 4 28 28 H 1.08990 * 109.47120 * 210.00503 * 8 6 4 29 29 H 1.09005 * 109.46405 * 330.00520 * 8 6 4 30 30 H 1.09001 * 109.47172 * 59.99708 * 10 9 8 31 31 H 1.09005 * 109.46960 * 179.97438 * 10 9 8 32 32 H 1.08996 * 109.47308 * 299.99349 * 10 9 8 33 33 H 1.09001 * 109.46656 * 60.00823 * 11 9 8 34 34 H 1.09003 * 109.46650 * 179.97438 * 11 9 8 35 35 H 1.08993 * 109.47413 * 300.00426 * 11 9 8 36 36 H 1.08997 * 109.46978 * 60.00010 * 12 9 8 37 37 H 1.08996 * 109.47345 * 180.02562 * 12 9 8 38 38 H 1.09001 * 109.46801 * 300.00135 * 12 9 8 39 39 H 0.97001 * 125.68444 * 180.02562 * 13 3 2 40 40 H 1.09004 * 109.46918 * 59.71442 * 15 14 13 41 41 H 0.96700 * 114.00034 * 299.99287 * 16 15 14 42 42 H 1.07996 * 126.06782 * 180.02562 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8897 2.5093 0.0005 5 8 0.8036 2.8083 -0.4597 6 7 2.6916 3.4648 0.5108 7 6 4.0411 3.1222 0.9664 8 6 2.2137 4.8462 0.6098 9 14 1.3844 5.0996 2.2586 10 6 2.6051 4.7653 3.6257 11 6 0.7760 6.8560 2.3842 12 6 -0.0580 3.9308 2.4145 13 7 3.6283 0.6626 0.0006 14 6 3.6218 -0.6927 0.0004 15 6 4.8434 -1.5752 0.0065 16 8 5.6265 -1.3126 -1.1595 17 14 4.3183 -3.3626 0.0123 18 1 3.5097 -3.6450 -1.2009 19 1 5.5220 -4.2321 0.0190 20 1 3.5043 -3.6355 1.2241 21 6 2.3379 -1.1247 0.0002 22 1 -0.3633 0.0000 1.0276 23 1 -0.3634 0.8900 -0.5138 24 1 -0.3633 -0.8899 -0.5139 25 1 4.7565 3.3269 0.1698 26 1 4.2918 3.7206 1.8423 27 1 4.0794 2.0643 1.2260 28 1 3.0576 5.5299 0.5186 29 1 1.4995 5.0417 -0.1901 30 1 3.4489 5.4492 3.5345 31 1 2.1199 4.9141 4.5904 32 1 2.9606 3.7376 3.5521 33 1 0.0616 7.0511 1.5844 34 1 0.2903 7.0041 3.3488 35 1 1.6195 7.5402 2.2929 36 1 0.2976 2.9031 2.3408 37 1 -0.5435 4.0794 3.3790 38 1 -0.7722 4.1264 1.6146 39 1 4.4190 1.2244 0.0011 40 1 5.4368 -1.3680 0.8971 41 1 5.1608 -1.4759 -1.9911 42 1 2.0136 -2.1548 0.0004 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_13940406.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:47:27 Heat of formation + Delta-G solvation = -52.802821 kcal Electronic energy + Delta-G solvation = -21501.753903 eV Core-core repulsion = 18413.629038 eV Total energy + Delta-G solvation = -3088.124866 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 284.147 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.71188 -40.19775 -37.80696 -36.72285 -33.51457 -31.90825 -29.68864 -29.09732 -28.40996 -28.37685 -28.29559 -27.59215 -25.51767 -22.04776 -21.64686 -20.07200 -18.83608 -18.08699 -17.19932 -16.98828 -16.54874 -16.30056 -15.69955 -15.09871 -14.93516 -14.58447 -14.28317 -14.22486 -14.13782 -14.01067 -13.95176 -13.85239 -13.67232 -13.53078 -13.41421 -13.28152 -13.10215 -12.99200 -12.94614 -12.83224 -12.27957 -12.14238 -11.85948 -11.71434 -11.02013 -10.87511 -10.80704 -10.68569 -9.76140 -9.38678 -9.02202 0.45971 0.98363 1.42704 1.46924 1.51270 1.62333 1.69505 1.82187 1.83596 2.05658 2.17991 2.43810 2.58724 3.28775 3.53625 3.55591 3.78983 4.12168 4.17689 4.23011 4.32153 4.40814 4.44581 4.62398 4.63031 4.69142 4.70678 4.76039 4.83602 4.87110 4.89254 4.94346 5.01811 5.22491 5.31776 5.38794 5.45022 5.48020 5.67074 5.71690 5.93735 6.25358 6.34573 6.35547 7.17945 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.070 4.070 3 C -0.049 4.049 4 C 0.583 3.417 5 O -0.516 6.516 6 N -0.597 5.597 7 C 0.047 3.953 8 C -0.179 4.179 9 Si 0.998 3.002 10 C -0.448 4.448 11 C -0.448 4.448 12 C -0.441 4.441 13 N -0.526 5.526 14 C 0.016 3.984 15 C -0.067 4.067 16 O -0.543 6.543 17 Si 0.976 3.024 18 H -0.247 1.247 19 H -0.253 1.253 20 H -0.247 1.247 21 C -0.204 4.204 22 H 0.066 0.934 23 H 0.084 0.916 24 H 0.066 0.934 25 H 0.062 0.938 26 H 0.086 0.914 27 H 0.082 0.918 28 H 0.083 0.917 29 H 0.096 0.904 30 H 0.068 0.932 31 H 0.071 0.929 32 H 0.067 0.933 33 H 0.071 0.929 34 H 0.071 0.929 35 H 0.069 0.931 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.073 0.927 39 H 0.422 0.578 40 H 0.120 0.880 41 H 0.381 0.619 42 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.171 -0.116 2.099 3.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.078 4.078 3 C -0.162 4.162 4 C 0.372 3.628 5 O -0.392 6.392 6 N -0.331 5.331 7 C -0.097 4.097 8 C -0.347 4.347 9 Si 1.193 2.807 10 C -0.555 4.555 11 C -0.556 4.556 12 C -0.549 4.549 13 N -0.128 5.128 14 C -0.102 4.102 15 C -0.177 4.177 16 O -0.348 6.348 17 Si 0.796 3.204 18 H -0.171 1.171 19 H -0.177 1.177 20 H -0.170 1.170 21 C -0.228 4.228 22 H 0.085 0.915 23 H 0.103 0.897 24 H 0.085 0.915 25 H 0.080 0.920 26 H 0.104 0.896 27 H 0.100 0.900 28 H 0.102 0.898 29 H 0.115 0.885 30 H 0.087 0.913 31 H 0.090 0.910 32 H 0.086 0.914 33 H 0.090 0.910 34 H 0.091 0.909 35 H 0.088 0.912 36 H 0.084 0.916 37 H 0.084 0.916 38 H 0.092 0.908 39 H 0.265 0.735 40 H 0.137 0.863 41 H 0.229 0.771 42 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.941 -0.498 2.257 3.741 hybrid contribution 0.377 0.687 -0.373 0.868 sum 3.318 0.189 1.884 3.821 Atomic orbital electron populations 1.20419 0.89048 1.03662 1.02359 1.19857 0.95900 0.90281 1.01766 1.20167 0.83547 0.93548 1.18902 1.17071 0.84684 0.82937 0.78129 1.90811 1.21544 1.81190 1.45627 1.47344 1.14797 1.08362 1.62554 1.22378 0.83464 1.02727 1.01136 1.26590 1.06450 0.82983 1.18706 0.79623 0.67646 0.67655 0.65742 1.26156 1.11281 1.04695 1.13382 1.26075 1.06304 1.18336 1.04875 1.26049 1.14058 1.10477 1.04294 1.42700 1.07426 1.06516 1.56181 1.21086 0.96747 0.83798 1.08578 1.24879 0.91819 1.09036 0.91946 1.86497 1.41455 1.91232 1.15617 0.85280 0.80176 0.72490 0.82449 1.17060 1.17665 1.16994 1.20606 0.91057 0.99084 1.12100 0.91484 0.89727 0.91499 0.92000 0.89562 0.90016 0.89801 0.88548 0.91266 0.90967 0.91357 0.90959 0.90936 0.91196 0.91638 0.91577 0.90769 0.73467 0.86265 0.77096 0.83807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.21 10.11 36.01 0.36 0.15 16 2 C -0.07 -0.19 6.20 -104.16 -0.65 -0.83 16 3 C -0.05 -0.11 6.42 -81.98 -0.53 -0.64 16 4 C 0.58 1.78 7.09 -12.85 -0.09 1.69 16 5 O -0.52 -2.99 14.57 5.20 0.08 -2.91 16 6 N -0.60 -0.13 2.38 -120.61 -0.29 -0.41 16 7 C 0.05 -0.12 9.03 59.85 0.54 0.42 16 8 C -0.18 0.12 4.70 59.85 0.28 0.40 16 9 Si 1.00 -1.76 12.39 -169.99 -2.11 -3.87 16 10 C -0.45 0.81 7.91 101.05 0.80 1.61 16 11 C -0.45 0.57 8.65 101.05 0.87 1.45 16 12 C -0.44 -0.39 8.57 101.05 0.87 0.48 16 13 N -0.53 0.01 4.78 -5.69 -0.03 -0.02 16 14 C 0.02 0.00 6.47 -81.95 -0.53 -0.53 16 15 C -0.07 0.12 3.08 36.01 0.11 0.23 16 16 O -0.54 0.62 12.88 -35.23 -0.45 0.17 16 17 Si 0.98 -1.62 25.83 -169.99 -4.39 -6.01 16 18 H -0.25 0.27 7.11 56.52 0.40 0.67 16 19 H -0.25 0.10 7.11 56.52 0.40 0.50 16 20 H -0.25 0.23 7.11 56.52 0.40 0.63 16 21 C -0.20 -0.24 9.27 -39.98 -0.37 -0.61 16 22 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 23 H 0.08 0.32 6.37 -51.93 -0.33 -0.01 16 24 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 25 H 0.06 -0.23 8.05 -51.93 -0.42 -0.65 16 26 H 0.09 -0.35 6.54 -51.93 -0.34 -0.69 16 27 H 0.08 -0.24 4.56 -51.93 -0.24 -0.47 16 28 H 0.08 -0.21 7.89 -51.93 -0.41 -0.62 16 29 H 0.10 0.08 7.18 -51.93 -0.37 -0.29 16 30 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 31 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 32 H 0.07 -0.11 7.31 -51.93 -0.38 -0.49 16 33 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 34 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 36 H 0.06 0.14 7.78 -51.93 -0.40 -0.27 16 37 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 38 H 0.07 0.15 7.96 -51.93 -0.41 -0.27 16 39 H 0.42 -0.88 6.02 -40.82 -0.25 -1.13 16 40 H 0.12 -0.36 7.96 -51.93 -0.41 -0.78 16 41 H 0.38 -1.43 8.70 45.56 0.40 -1.04 16 42 H 0.14 -0.04 6.17 -52.49 -0.32 -0.36 16 LS Contribution 338.18 15.07 5.10 5.10 Total: 0.00 -6.66 338.18 -6.43 -13.10 By element: Atomic # 1 Polarization: -2.93 SS G_CDS: -6.01 Total: -8.94 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: 1.67 Total: 3.80 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.31 Total: -0.43 kcal Atomic # 8 Polarization: -2.37 SS G_CDS: -0.38 Total: -2.74 kcal Atomic # 14 Polarization: -3.38 SS G_CDS: -6.50 Total: -9.88 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -6.66 -6.43 -13.10 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_13940406.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.706 kcal (2) G-P(sol) polarization free energy of solvation -6.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.803 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds