Wall clock time and date at job start Sat Mar 6 2021 14:49:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.46499 * 120.00034 * 2 1 4 4 Si 1.86302 * 109.47136 * 269.99846 * 3 2 1 5 5 C 1.86303 * 109.46964 * 59.99643 * 4 3 2 6 6 C 1.86293 * 109.47326 * 180.02562 * 4 3 2 7 7 C 1.86299 * 109.47027 * 300.00139 * 4 3 2 8 8 C 1.34779 * 120.00094 * 179.97438 * 2 1 3 9 9 O 1.21286 * 120.00040 * 180.02562 * 8 2 1 10 10 C 1.50698 * 120.00201 * 0.02562 * 8 2 1 11 11 C 1.52992 * 109.47592 * 179.97438 * 10 8 2 12 12 C 1.52997 * 109.47482 * 179.97438 * 11 10 8 13 13 O 1.42898 * 109.47319 * 180.02562 * 12 11 10 14 14 C 1.35900 * 117.00172 * 179.97438 * 13 12 11 15 15 C 1.38710 * 120.05544 * 359.72769 * 14 13 12 16 16 C 1.38159 * 119.94311 * 179.72143 * 15 14 13 17 17 C 1.38250 * 120.05742 * 0.57011 * 16 15 14 18 18 C 1.38280 * 120.10833 * 359.68104 * 17 16 15 19 19 C 1.50697 * 119.97205 * 180.02562 * 18 17 16 20 20 O 1.42902 * 109.47393 * 245.02079 * 19 18 17 21 21 Si 1.86306 * 109.47148 * 5.02162 * 19 18 17 22 22 H 1.48495 * 109.47180 * 179.97438 * 21 19 18 23 23 H 1.48491 * 109.46932 * 300.00295 * 21 19 18 24 24 H 1.48504 * 109.46673 * 59.99962 * 21 19 18 25 25 C 1.38129 * 120.05716 * 0.04353 * 18 17 16 26 26 H 1.08999 * 109.47474 * 270.00311 * 1 2 3 27 27 H 1.08996 * 109.47479 * 30.00370 * 1 2 3 28 28 H 1.09007 * 109.47434 * 150.00229 * 1 2 3 29 29 H 1.09000 * 109.47086 * 29.99585 * 3 2 1 30 30 H 1.09002 * 109.47567 * 149.99892 * 3 2 1 31 31 H 1.09000 * 109.47141 * 60.00332 * 5 4 3 32 32 H 1.09007 * 109.46819 * 179.97438 * 5 4 3 33 33 H 1.09000 * 109.47229 * 300.00342 * 5 4 3 34 34 H 1.09002 * 109.47487 * 59.99978 * 6 4 3 35 35 H 1.09000 * 109.47348 * 180.02562 * 6 4 3 36 36 H 1.09000 * 109.46975 * 299.99788 * 6 4 3 37 37 H 1.08996 * 109.47699 * 59.99696 * 7 4 3 38 38 H 1.09004 * 109.47479 * 179.97438 * 7 4 3 39 39 H 1.09004 * 109.47247 * 299.99836 * 7 4 3 40 40 H 1.09002 * 109.47210 * 59.99599 * 10 8 2 41 41 H 1.09001 * 109.46665 * 299.99857 * 10 8 2 42 42 H 1.09002 * 109.47103 * 59.99616 * 11 10 8 43 43 H 1.08998 * 109.46862 * 300.00428 * 11 10 8 44 44 H 1.09002 * 109.47153 * 59.99783 * 12 11 10 45 45 H 1.09001 * 109.46832 * 299.99974 * 12 11 10 46 46 H 1.08006 * 120.02494 * 359.97438 * 15 14 13 47 47 H 1.08006 * 119.97038 * 180.27439 * 16 15 14 48 48 H 1.08000 * 119.94133 * 179.70045 * 17 16 15 49 49 H 1.09005 * 109.47122 * 125.02014 * 19 18 17 50 50 H 0.96703 * 113.99614 * 179.97438 * 20 19 18 51 51 H 1.07998 * 120.02418 * 180.02562 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1974 1.2687 0.0000 4 14 2.5080 1.8065 -1.7565 5 6 0.8801 2.0291 -2.6347 6 6 3.4401 3.4194 -1.7565 7 6 3.5148 0.5081 -2.6346 8 6 2.1388 -1.1672 0.0005 9 8 3.3517 -1.1672 0.0010 10 6 1.3854 -2.4723 0.0005 11 6 2.3796 -3.6352 0.0005 12 6 1.6146 -4.9602 0.0012 13 8 2.5432 -6.0464 0.0018 14 6 2.0238 -7.3022 0.0029 15 6 0.6489 -7.4853 0.0092 16 6 0.1233 -8.7630 0.0045 17 6 0.9665 -9.8586 0.0056 18 6 2.3376 -9.6787 0.0046 19 6 3.2538 -10.8751 0.0051 20 8 3.9959 -10.9063 1.2260 21 14 2.2422 -12.4322 -0.1466 22 1 3.1451 -13.6111 -0.1467 23 1 1.3040 -12.5267 1.0005 24 1 1.4711 -12.3998 -1.4154 25 6 2.8680 -8.4033 0.0035 26 1 -0.3634 0.0001 1.0276 27 1 -0.3634 0.8899 -0.5139 28 1 -0.3634 -0.8900 -0.5138 29 1 1.6083 2.0284 0.5138 30 1 3.1498 1.1385 0.5138 31 1 0.2910 2.7888 -2.1210 32 1 1.0618 2.3443 -3.6623 33 1 0.3351 1.0852 -2.6347 34 1 4.3926 3.2888 -1.2428 35 1 3.6214 3.7343 -2.7842 36 1 2.8514 4.1793 -1.2426 37 1 2.9699 -0.4359 -2.6346 38 1 3.6961 0.8225 -3.6625 39 1 4.4672 0.3777 -2.1208 40 1 0.7590 -2.5303 -0.8897 41 1 0.7584 -2.5298 0.8903 42 1 3.0063 -3.5775 0.8905 43 1 3.0062 -3.5774 -0.8894 44 1 0.9876 -5.0183 -0.8886 45 1 0.9883 -5.0177 0.8914 46 1 -0.0103 -6.6297 0.0136 47 1 -0.9472 -8.9061 0.0049 48 1 0.5536 -10.8566 0.0068 49 1 3.9425 -10.8058 -0.8370 50 1 4.6074 -11.6522 1.2956 51 1 3.9389 -8.2635 0.0023 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:49:03 Heat of formation + Delta-G solvation = -125.400115 kcal Electronic energy + Delta-G solvation = -26777.772651 eV Core-core repulsion = 22993.942071 eV Total energy + Delta-G solvation = -3783.830580 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 339.182 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.21436 -40.79741 -39.03816 -37.31706 -36.52109 -34.91173 -32.51639 -31.26413 -29.79519 -29.27920 -28.66925 -28.37722 -27.97076 -26.90140 -26.05636 -23.62627 -23.12095 -21.69839 -20.14527 -18.80623 -18.46222 -18.05017 -17.56422 -17.38262 -17.01262 -16.79476 -16.71437 -15.81285 -15.61760 -15.24213 -14.91123 -14.58004 -14.39982 -14.27663 -14.13369 -14.07296 -14.01033 -13.92096 -13.82264 -13.62024 -13.46465 -13.40301 -13.27553 -13.24188 -13.09472 -13.02681 -12.86715 -12.58779 -12.43060 -12.21775 -12.02677 -11.84052 -11.66626 -11.61344 -11.56645 -10.96427 -10.81540 -10.66569 -10.37004 -9.81518 -9.21319 -9.13707 0.29566 0.50575 1.13888 1.45001 1.48063 1.51261 1.70055 1.80584 1.85368 1.90538 2.06267 2.34966 2.60230 2.72459 3.41912 3.47090 3.80835 3.81600 3.87650 3.93811 3.98633 4.08044 4.11032 4.19916 4.26592 4.30022 4.32495 4.34758 4.39724 4.47541 4.59707 4.60897 4.63885 4.65330 4.70337 4.71641 4.71993 4.84714 4.89782 4.97308 5.01534 5.06002 5.20443 5.35142 5.38312 5.43241 5.44990 5.49837 5.54348 5.67908 5.77193 6.33747 6.49498 6.59277 7.23716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.600 5.600 3 C -0.179 4.179 4 Si 0.998 3.002 5 C -0.446 4.446 6 C -0.449 4.449 7 C -0.439 4.439 8 C 0.506 3.494 9 O -0.528 6.528 10 C -0.137 4.137 11 C -0.105 4.105 12 C 0.060 3.940 13 O -0.311 6.311 14 C 0.132 3.868 15 C -0.206 4.206 16 C -0.073 4.073 17 C -0.163 4.163 18 C -0.037 4.037 19 C -0.084 4.084 20 O -0.543 6.543 21 Si 0.951 3.049 22 H -0.257 1.257 23 H -0.248 1.248 24 H -0.249 1.249 25 C -0.122 4.122 26 H 0.058 0.942 27 H 0.078 0.922 28 H 0.075 0.925 29 H 0.082 0.918 30 H 0.092 0.908 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.068 0.932 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.069 0.931 37 H 0.063 0.937 38 H 0.063 0.937 39 H 0.072 0.928 40 H 0.097 0.903 41 H 0.096 0.904 42 H 0.083 0.917 43 H 0.084 0.916 44 H 0.064 0.936 45 H 0.064 0.936 46 H 0.130 0.870 47 H 0.130 0.870 48 H 0.122 0.878 49 H 0.078 0.922 50 H 0.381 0.619 51 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.160 1.058 -1.430 5.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.334 5.334 3 C -0.348 4.348 4 Si 1.194 2.806 5 C -0.554 4.554 6 C -0.557 4.557 7 C -0.547 4.547 8 C 0.294 3.706 9 O -0.405 6.405 10 C -0.177 4.177 11 C -0.143 4.143 12 C -0.016 4.016 13 O -0.224 6.224 14 C 0.087 3.913 15 C -0.224 4.224 16 C -0.091 4.091 17 C -0.180 4.180 18 C -0.037 4.037 19 C -0.194 4.194 20 O -0.349 6.349 21 Si 0.774 3.226 22 H -0.181 1.181 23 H -0.171 1.171 24 H -0.173 1.173 25 C -0.141 4.141 26 H 0.077 0.923 27 H 0.097 0.903 28 H 0.094 0.906 29 H 0.100 0.900 30 H 0.110 0.890 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.087 0.913 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.082 0.918 38 H 0.082 0.918 39 H 0.092 0.908 40 H 0.115 0.885 41 H 0.115 0.885 42 H 0.102 0.898 43 H 0.102 0.898 44 H 0.082 0.918 45 H 0.082 0.918 46 H 0.148 0.852 47 H 0.148 0.852 48 H 0.139 0.861 49 H 0.096 0.904 50 H 0.228 0.772 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -5.167 0.920 -1.350 5.420 hybrid contribution 0.116 0.052 0.043 0.134 sum -5.051 0.973 -1.307 5.308 Atomic orbital electron populations 1.21953 0.79351 1.03805 1.02355 1.47476 1.06779 1.05554 1.73637 1.26521 1.00844 0.87942 1.19492 0.79615 0.67568 0.67202 0.66260 1.26144 1.16615 1.04409 1.08232 1.26088 1.08671 1.16246 1.04666 1.26050 1.09625 1.11714 1.07286 1.20505 0.88166 0.85159 0.76795 1.90726 1.13703 1.87076 1.48952 1.21565 0.99304 0.92174 1.04672 1.21241 0.97868 0.89606 1.05613 1.22826 0.91922 0.85299 1.01516 1.86081 1.35948 1.12009 1.88410 1.18991 0.91854 0.84563 0.95917 1.21291 0.93855 0.98680 1.08603 1.20855 0.99855 0.91478 0.96899 1.20901 0.92760 0.99193 1.05196 1.19023 0.92895 0.93147 0.98608 1.24784 0.99314 1.05163 0.90153 1.86524 1.58698 1.52803 1.36865 0.85679 0.79832 0.75503 0.81616 1.18140 1.17115 1.17291 1.20240 1.00154 0.89296 1.04374 0.92314 0.90289 0.90648 0.89986 0.88969 0.91273 0.91079 0.91315 0.91027 0.91008 0.91221 0.91820 0.91754 0.90839 0.88504 0.88546 0.89811 0.89768 0.91807 0.91819 0.85230 0.85243 0.86061 0.90371 0.77194 0.84755 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.27 10.00 59.84 0.60 0.33 16 2 N -0.60 0.52 2.37 -119.17 -0.28 0.24 16 3 C -0.18 0.17 4.65 59.85 0.28 0.45 16 4 Si 1.00 -1.93 12.32 -169.99 -2.10 -4.02 16 5 C -0.45 0.98 7.97 101.05 0.80 1.78 16 6 C -0.45 0.53 8.65 101.05 0.87 1.41 16 7 C -0.44 -0.37 8.19 101.05 0.83 0.45 16 8 C 0.51 0.57 7.23 -10.99 -0.08 0.49 16 9 O -0.53 -2.62 15.01 5.55 0.08 -2.54 16 10 C -0.14 0.25 4.25 -27.89 -0.12 0.13 16 11 C -0.11 -0.02 4.87 -26.74 -0.13 -0.15 16 12 C 0.06 -0.02 4.74 37.16 0.18 0.16 16 13 O -0.31 -0.96 10.14 -19.43 -0.20 -1.16 16 14 C 0.13 0.40 6.69 -39.22 -0.26 0.14 16 15 C -0.21 -0.28 9.04 -39.44 -0.36 -0.63 16 16 C -0.07 -0.08 10.04 -39.61 -0.40 -0.47 16 17 C -0.16 -0.30 8.67 -39.56 -0.34 -0.65 16 18 C -0.04 -0.09 5.38 -104.65 -0.56 -0.66 16 19 C -0.08 -0.04 2.79 36.00 0.10 0.06 16 20 O -0.54 -0.57 12.81 -35.23 -0.45 -1.03 16 21 Si 0.95 -0.18 25.14 -169.99 -4.27 -4.46 16 22 H -0.26 0.05 7.11 56.52 0.40 0.45 16 23 H -0.25 -0.28 7.04 56.52 0.40 0.12 16 24 H -0.25 -0.08 7.11 56.52 0.40 0.33 16 25 C -0.12 -0.41 9.62 -39.43 -0.38 -0.79 16 26 H 0.06 -0.25 8.14 -51.93 -0.42 -0.67 16 27 H 0.08 -0.38 6.82 -51.93 -0.35 -0.73 16 28 H 0.07 -0.41 6.44 -51.93 -0.33 -0.74 16 29 H 0.08 -0.21 7.89 -51.93 -0.41 -0.62 16 30 H 0.09 0.08 7.24 -51.93 -0.38 -0.29 16 31 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 32 H 0.07 -0.12 7.96 -51.92 -0.41 -0.54 16 33 H 0.07 -0.16 7.46 -51.93 -0.39 -0.55 16 34 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 35 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 36 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.06 0.11 7.78 -51.93 -0.40 -0.30 16 38 H 0.06 0.02 7.96 -51.93 -0.41 -0.39 16 39 H 0.07 0.17 7.96 -51.93 -0.41 -0.24 16 40 H 0.10 -0.39 7.40 -51.93 -0.38 -0.77 16 41 H 0.10 -0.35 8.11 -51.93 -0.42 -0.77 16 42 H 0.08 0.16 8.10 -51.93 -0.42 -0.26 16 43 H 0.08 0.14 8.10 -51.93 -0.42 -0.28 16 44 H 0.06 -0.11 7.68 -51.93 -0.40 -0.51 16 45 H 0.06 -0.10 7.65 -51.93 -0.40 -0.49 16 46 H 0.13 -0.13 6.30 -52.48 -0.33 -0.46 16 47 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 48 H 0.12 0.06 4.86 -52.49 -0.26 -0.20 16 49 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 50 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 51 H 0.13 0.41 8.06 -52.49 -0.42 -0.02 16 LS Contribution 410.36 15.07 6.18 6.18 Total: 0.00 -8.54 410.36 -8.27 -16.81 By element: Atomic # 1 Polarization: -3.81 SS G_CDS: -8.27 Total: -12.08 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: 1.03 Total: 2.06 kcal Atomic # 7 Polarization: 0.52 SS G_CDS: -0.28 Total: 0.24 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.56 Total: -4.72 kcal Atomic # 14 Polarization: -2.11 SS G_CDS: -6.37 Total: -8.48 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.54 -8.27 -16.81 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.591 kcal (2) G-P(sol) polarization free energy of solvation -8.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.274 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds