Wall clock time and date at job start Sat Mar 6 2021 14:49:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46498 * 119.99831 * 2 1 4 4 Si 1.86300 * 109.47246 * 269.99863 * 3 2 1 5 5 C 1.86301 * 109.46637 * 60.00168 * 4 3 2 6 6 C 1.86294 * 109.47146 * 180.02562 * 4 3 2 7 7 C 1.86302 * 109.47222 * 300.00733 * 4 3 2 8 8 C 1.34778 * 119.99768 * 180.02562 * 2 1 3 9 9 O 1.21616 * 119.99969 * 185.23395 * 8 2 1 10 10 C 1.47375 * 120.00265 * 5.23467 * 8 2 1 11 11 C 1.36411 * 127.19635 * 141.11760 * 10 8 2 12 12 C 1.50705 * 125.80002 * 0.02562 * 11 10 8 13 13 O 1.42899 * 109.46911 * 90.00223 * 12 11 10 14 14 C 1.35904 * 116.99918 * 180.02562 * 13 12 11 15 15 C 1.38732 * 120.05303 * 359.72721 * 14 13 12 16 16 C 1.38149 * 119.93769 * 179.74326 * 15 14 13 17 17 C 1.38257 * 120.05900 * 0.50948 * 16 15 14 18 18 C 1.50704 * 119.94421 * 179.74198 * 17 16 15 19 19 O 1.42894 * 109.47286 * 245.01625 * 18 17 16 20 20 Si 1.86297 * 109.47196 * 5.02324 * 18 17 16 21 21 H 1.48501 * 109.47042 * 59.99602 * 20 18 17 22 22 H 1.48499 * 109.47009 * 179.97438 * 20 18 17 23 23 H 1.48504 * 109.46837 * 299.99788 * 20 18 17 24 24 C 1.38263 * 120.11329 * 359.76239 * 17 16 15 25 25 C 1.38150 * 120.05475 * 359.97438 * 24 17 16 26 26 O 1.33651 * 108.40001 * 179.73668 * 11 10 8 27 27 C 1.34212 * 110.90812 * 0.40958 * 26 11 10 28 28 C 1.34176 * 109.12537 * 359.58359 * 27 26 11 29 29 H 1.09002 * 109.46952 * 264.53174 * 1 2 3 30 30 H 1.08998 * 109.47381 * 24.53002 * 1 2 3 31 31 H 1.09002 * 109.47301 * 144.53702 * 1 2 3 32 32 H 1.08995 * 109.47286 * 30.00779 * 3 2 1 33 33 H 1.09007 * 109.46908 * 150.00563 * 3 2 1 34 34 H 1.08997 * 109.47079 * 60.00169 * 5 4 3 35 35 H 1.09004 * 109.46877 * 179.97438 * 5 4 3 36 36 H 1.09001 * 109.47373 * 299.99893 * 5 4 3 37 37 H 1.08999 * 109.47341 * 60.00857 * 6 4 3 38 38 H 1.09004 * 109.47180 * 180.02562 * 6 4 3 39 39 H 1.08997 * 109.47277 * 300.00264 * 6 4 3 40 40 H 1.08988 * 109.47260 * 59.99497 * 7 4 3 41 41 H 1.09004 * 109.46949 * 179.97438 * 7 4 3 42 42 H 1.09006 * 109.46629 * 299.99446 * 7 4 3 43 43 H 1.08995 * 109.47196 * 210.00084 * 12 11 10 44 44 H 1.08997 * 109.47074 * 330.00119 * 12 11 10 45 45 H 1.08000 * 120.03212 * 359.97438 * 15 14 13 46 46 H 1.08008 * 119.96695 * 180.22809 * 16 15 14 47 47 H 1.09006 * 109.46600 * 125.01991 * 18 17 16 48 48 H 0.96708 * 113.99549 * 60.00211 * 19 18 17 49 49 H 1.07997 * 119.97905 * 179.97438 * 24 17 16 50 50 H 1.07995 * 120.02732 * 179.97438 * 25 24 17 51 51 H 1.08001 * 125.44008 * 179.85404 * 27 26 11 52 52 H 1.07998 * 127.03026 * 180.24024 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2687 0.0000 4 14 2.5080 1.8066 -1.7564 5 6 0.8801 2.0293 -2.6346 6 6 3.4401 3.4195 -1.7564 7 6 3.5147 0.5081 -2.6347 8 6 2.1388 -1.1672 -0.0005 9 8 3.3512 -1.1695 0.0956 10 6 1.4066 -2.4408 -0.1175 11 6 1.7817 -3.5459 -0.8238 12 6 3.0420 -3.6857 -1.6384 13 8 4.0878 -4.2023 -0.8128 14 6 5.3002 -4.3892 -1.3977 15 6 5.4780 -4.0870 -2.7400 16 6 6.7129 -4.2729 -3.3308 17 6 7.7681 -4.7695 -2.5883 18 6 9.1126 -4.9768 -3.2369 19 8 9.4243 -6.3712 -3.2519 20 14 9.0651 -4.3322 -4.9842 21 1 8.7411 -2.8831 -4.9685 22 1 10.3901 -4.5359 -5.6231 23 1 8.0264 -5.0634 -5.7534 24 6 7.5920 -5.0768 -1.2518 25 6 6.3605 -4.8876 -0.6548 26 8 0.8448 -4.4858 -0.6657 27 6 -0.1510 -4.0425 0.1173 28 6 0.1192 -2.7861 0.5031 29 1 -0.3633 -0.0979 1.0230 30 1 -0.3634 0.9349 -0.4266 31 1 -0.3634 -0.8370 -0.5962 32 1 1.6084 2.0283 0.5139 33 1 3.1499 1.1383 0.5138 34 1 0.2910 2.7889 -2.1207 35 1 1.0617 2.3444 -3.6621 36 1 0.3351 1.0853 -2.6346 37 1 4.3926 3.2888 -1.2428 38 1 3.6214 3.7345 -2.7841 39 1 2.8514 4.1794 -1.2424 40 1 2.9697 -0.4357 -2.6347 41 1 3.6960 0.8226 -3.6626 42 1 4.4672 0.3778 -2.1209 43 1 2.8639 -4.3686 -2.4690 44 1 3.3338 -2.7099 -2.0265 45 1 4.6528 -3.7033 -3.3216 46 1 6.8528 -4.0344 -4.3749 47 1 9.8749 -4.4401 -2.6722 48 1 8.7866 -6.9116 -3.7381 49 1 8.4176 -5.4649 -0.6739 50 1 6.2233 -5.1281 0.3890 51 1 -1.0276 -4.6083 0.3963 52 1 -0.4854 -2.1569 1.1395 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_4549634.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:49:51 Heat of formation + Delta-G solvation = -88.536758 kcal Electronic energy + Delta-G solvation = -33107.175832 eV Core-core repulsion = 28777.120773 eV Total energy + Delta-G solvation = -4330.055060 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 377.166 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.72411 -41.17917 -40.50683 -39.12646 -37.11965 -36.49648 -34.11277 -32.84358 -31.90966 -31.32382 -29.75738 -29.03498 -28.48716 -28.45094 -28.02439 -26.82497 -26.03774 -23.92421 -23.54985 -22.37837 -22.05126 -20.06126 -19.42086 -18.67931 -18.27429 -17.53809 -17.21208 -17.09527 -16.92317 -16.66312 -16.51509 -16.32135 -15.96786 -15.64267 -15.28870 -15.00329 -14.57573 -14.38508 -14.36161 -14.31717 -14.16155 -14.12187 -13.97130 -13.87776 -13.82362 -13.64553 -13.53832 -13.41124 -13.30174 -13.13700 -13.11085 -13.03223 -12.85473 -12.24054 -12.13346 -12.00522 -11.95528 -11.71702 -11.51213 -11.10406 -10.91697 -10.85152 -10.71199 -10.34320 -9.93986 -9.87493 -9.21328 -9.10621 0.13756 0.39111 0.40793 0.99339 1.20340 1.45664 1.49277 1.53011 1.55061 1.70871 1.80249 1.94794 2.07785 2.17905 2.48475 2.56101 2.76314 3.30471 3.49316 3.54818 3.70899 3.73734 3.85570 3.90615 3.97199 4.02259 4.07087 4.27240 4.33241 4.35173 4.40978 4.52851 4.53995 4.60887 4.62191 4.62711 4.65863 4.67958 4.69505 4.75303 4.76316 4.77201 4.81515 4.95673 5.03748 5.13531 5.24970 5.35617 5.36769 5.42540 5.47935 5.57350 5.58976 5.78960 5.89150 6.31478 6.39097 6.61174 7.20546 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.591 5.591 3 C -0.179 4.179 4 Si 0.995 3.005 5 C -0.446 4.446 6 C -0.447 4.447 7 C -0.441 4.441 8 C 0.576 3.424 9 O -0.518 6.518 10 C -0.198 4.198 11 C 0.048 3.952 12 C 0.142 3.858 13 O -0.298 6.298 14 C 0.143 3.857 15 C -0.204 4.204 16 C -0.083 4.083 17 C -0.159 4.159 18 C -0.075 4.075 19 O -0.539 6.539 20 Si 0.947 3.053 21 H -0.250 1.250 22 H -0.254 1.254 23 H -0.253 1.253 24 C -0.048 4.048 25 C -0.147 4.147 26 O -0.165 6.165 27 C -0.015 4.015 28 C -0.197 4.197 29 H 0.058 0.942 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.084 0.916 33 H 0.095 0.905 34 H 0.069 0.931 35 H 0.070 0.930 36 H 0.068 0.932 37 H 0.071 0.929 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.060 0.940 41 H 0.067 0.933 42 H 0.074 0.926 43 H 0.084 0.916 44 H 0.100 0.900 45 H 0.129 0.871 46 H 0.122 0.878 47 H 0.117 0.883 48 H 0.376 0.624 49 H 0.135 0.865 50 H 0.134 0.866 51 H 0.214 0.786 52 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.944 2.118 -1.768 6.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.324 5.324 3 C -0.348 4.348 4 Si 1.191 2.809 5 C -0.554 4.554 6 C -0.556 4.556 7 C -0.549 4.549 8 C 0.364 3.636 9 O -0.394 6.394 10 C -0.203 4.203 11 C -0.004 4.004 12 C 0.067 3.933 13 O -0.211 6.211 14 C 0.098 3.902 15 C -0.223 4.223 16 C -0.101 4.101 17 C -0.160 4.160 18 C -0.185 4.185 19 O -0.344 6.344 20 Si 0.770 3.230 21 H -0.174 1.174 22 H -0.178 1.178 23 H -0.177 1.177 24 C -0.066 4.066 25 C -0.165 4.165 26 O -0.061 6.061 27 C -0.082 4.082 28 C -0.217 4.217 29 H 0.076 0.924 30 H 0.097 0.903 31 H 0.097 0.903 32 H 0.103 0.897 33 H 0.113 0.887 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.087 0.913 37 H 0.090 0.910 38 H 0.090 0.910 39 H 0.089 0.911 40 H 0.079 0.921 41 H 0.086 0.914 42 H 0.093 0.907 43 H 0.103 0.897 44 H 0.118 0.882 45 H 0.147 0.853 46 H 0.140 0.860 47 H 0.135 0.865 48 H 0.223 0.777 49 H 0.153 0.847 50 H 0.152 0.848 51 H 0.230 0.770 52 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -4.876 2.332 -2.101 5.799 hybrid contribution -1.009 -0.025 0.328 1.061 sum -5.885 2.307 -1.774 6.565 Atomic orbital electron populations 1.22118 0.79283 1.03886 1.02167 1.47255 1.06869 1.05125 1.73146 1.26600 1.01025 0.87557 1.19589 0.79659 0.67686 0.67337 0.66230 1.26129 1.16535 1.04509 1.08196 1.26068 1.08666 1.16110 1.04721 1.26066 1.09618 1.11584 1.07631 1.17259 0.86587 0.82391 0.77390 1.90848 1.13079 1.86764 1.48730 1.21214 0.98022 0.96234 1.04787 1.21778 0.91095 0.86461 1.01070 1.20893 0.80668 1.01225 0.90518 1.86152 1.17127 1.79436 1.38403 1.18975 0.84861 0.94995 0.91362 1.21136 0.99099 1.07797 0.94277 1.20805 0.92383 0.97680 0.99243 1.20178 0.96003 1.04483 0.95330 1.24885 0.95837 0.87037 1.10781 1.86515 1.52832 1.16643 1.78460 0.85730 0.80936 0.80675 0.75614 1.17416 1.17841 1.17660 1.20830 0.96230 0.95808 0.93750 1.20514 0.91187 1.04025 1.00782 1.83777 1.27048 1.39814 1.55413 1.24075 0.93073 0.95765 0.95252 1.23026 0.96344 0.97217 1.05070 0.92365 0.90286 0.90302 0.89735 0.88695 0.91188 0.91048 0.91271 0.90968 0.90957 0.91133 0.92120 0.91417 0.90697 0.89749 0.88224 0.85287 0.85993 0.86534 0.77729 0.84679 0.84788 0.76955 0.81913 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.18 8.80 59.85 0.53 0.35 16 2 N -0.59 -0.17 2.38 -120.37 -0.29 -0.46 16 3 C -0.18 0.11 4.65 59.85 0.28 0.38 16 4 Si 1.00 -1.95 12.45 -169.99 -2.12 -4.07 16 5 C -0.45 0.97 8.09 101.05 0.82 1.78 16 6 C -0.45 0.62 8.65 101.05 0.87 1.49 16 7 C -0.44 -0.12 8.60 101.05 0.87 0.75 16 8 C 0.58 1.79 6.86 -12.54 -0.09 1.70 16 9 O -0.52 -3.23 15.84 5.26 0.08 -3.15 16 10 C -0.20 -0.42 5.43 -103.28 -0.56 -0.98 16 11 C 0.05 0.11 7.00 -34.96 -0.24 -0.13 16 12 C 0.14 0.26 4.73 36.01 0.17 0.43 16 13 O -0.30 -1.27 10.12 -19.44 -0.20 -1.47 16 14 C 0.14 0.49 6.69 -39.22 -0.26 0.23 16 15 C -0.20 -0.40 9.04 -39.43 -0.36 -0.75 16 16 C -0.08 -0.12 8.66 -39.61 -0.34 -0.47 16 17 C -0.16 -0.24 5.35 -104.60 -0.56 -0.80 16 18 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 19 O -0.54 -0.50 12.83 -35.23 -0.45 -0.96 16 20 Si 0.95 0.06 25.13 -169.99 -4.27 -4.22 16 21 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 22 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 23 H -0.25 -0.01 7.04 56.52 0.40 0.39 16 24 C -0.05 -0.09 9.68 -39.60 -0.38 -0.47 16 25 C -0.15 -0.43 9.99 -39.43 -0.39 -0.82 16 26 O -0.17 -0.24 10.52 7.67 0.08 -0.16 16 27 C -0.01 0.02 12.03 29.30 0.35 0.37 16 28 C -0.20 0.13 8.84 -37.45 -0.33 -0.20 16 29 H 0.06 -0.19 7.43 -51.93 -0.39 -0.58 16 30 H 0.08 -0.32 7.19 -51.93 -0.37 -0.69 16 31 H 0.08 -0.23 5.93 -51.93 -0.31 -0.54 16 32 H 0.08 -0.20 7.89 -51.93 -0.41 -0.61 16 33 H 0.09 0.11 7.18 -51.93 -0.37 -0.26 16 34 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 36 H 0.07 -0.14 7.61 -51.93 -0.40 -0.54 16 37 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 38 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 40 H 0.06 0.05 7.71 -51.94 -0.40 -0.35 16 41 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 42 H 0.07 0.13 7.96 -51.93 -0.41 -0.29 16 43 H 0.08 -0.04 7.65 -51.93 -0.40 -0.44 16 44 H 0.10 0.13 7.12 -51.93 -0.37 -0.23 16 45 H 0.13 -0.01 6.30 -52.49 -0.33 -0.35 16 46 H 0.12 -0.01 4.86 -52.48 -0.25 -0.26 16 47 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 48 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 49 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 50 H 0.13 0.29 8.06 -52.49 -0.42 -0.13 16 51 H 0.21 -1.10 8.06 -52.49 -0.42 -1.52 16 52 H 0.16 -0.49 6.68 -52.49 -0.35 -0.84 16 LS Contribution 426.52 15.07 6.43 6.43 Total: 0.00 -8.87 426.52 -7.59 -16.46 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -7.33 Total: -11.35 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: 0.47 Total: 2.93 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -0.29 Total: -0.46 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -0.48 Total: -5.73 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -6.39 Total: -8.29 kcal Total LS contribution 6.43 Total: 6.43 kcal Total: -8.87 -7.59 -16.46 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_4549634.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.072 kcal (2) G-P(sol) polarization free energy of solvation -8.872 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.592 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.537 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds