Wall clock time and date at job start Sat Mar 6 2021 14:50:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35995 * 117.00144 * 2 1 4 4 C 1.38522 * 120.06809 * 0.02562 * 3 2 1 5 5 C 1.38292 * 119.99253 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.92466 * 179.97438 * 5 4 3 7 7 O 1.42895 * 109.47079 * 255.00038 * 6 5 4 8 8 Si 1.86301 * 109.47149 * 14.99533 * 6 5 4 9 9 H 1.48506 * 109.47302 * 59.99966 * 8 6 5 10 10 H 1.48503 * 109.47334 * 300.00099 * 8 6 5 11 11 H 1.48500 * 109.47376 * 180.02562 * 8 6 5 12 12 C 1.38205 * 120.14718 * 0.26617 * 5 4 3 13 13 N 1.48013 * 119.92321 * 179.70850 * 12 5 4 14 14 O 1.21800 * 119.99607 * 180.02562 * 13 12 5 15 15 O 1.21799 * 119.99792 * 0.02562 * 13 12 5 16 16 C 1.38278 * 120.14815 * 359.45385 * 12 5 4 17 17 C 1.38529 * 120.00011 * 0.55053 * 16 12 5 18 18 O 1.35989 * 120.07565 * 179.74671 * 17 16 12 19 19 C 1.42903 * 116.99832 * 359.97438 * 18 17 16 20 20 C 1.50706 * 109.46793 * 179.97438 * 19 18 17 21 21 O 1.21271 * 120.00095 * 0.02562 * 20 19 18 22 22 N 1.34778 * 119.99614 * 180.02562 * 20 19 18 23 23 C 1.46504 * 120.00050 * 359.97438 * 22 20 19 24 24 C 1.46494 * 119.99930 * 180.02562 * 22 20 19 25 25 Si 1.86302 * 109.47709 * 89.99750 * 24 22 20 26 26 C 1.86304 * 109.46931 * 59.99877 * 25 24 22 27 27 C 1.86290 * 109.47471 * 180.02562 * 25 24 22 28 28 C 1.86301 * 109.46904 * 300.00071 * 25 24 22 29 29 H 1.08997 * 109.47094 * 299.99861 * 1 2 3 30 30 H 1.09004 * 109.46829 * 59.99976 * 1 2 3 31 31 H 1.08999 * 109.47146 * 179.97438 * 1 2 3 32 32 H 1.07992 * 120.00675 * 359.97438 * 4 3 2 33 33 H 1.09001 * 109.47380 * 134.99435 * 6 5 4 34 34 H 0.96698 * 114.00299 * 180.02562 * 7 6 5 35 35 H 1.07998 * 120.00382 * 180.27099 * 16 12 5 36 36 H 1.08996 * 109.47399 * 299.99766 * 19 18 17 37 37 H 1.09003 * 109.47212 * 60.00069 * 19 18 17 38 38 H 1.08998 * 109.46769 * 90.00284 * 23 22 20 39 39 H 1.08998 * 109.46686 * 210.00010 * 23 22 20 40 40 H 1.08993 * 109.47213 * 329.99998 * 23 22 20 41 41 H 1.09004 * 109.47603 * 210.00208 * 24 22 20 42 42 H 1.09005 * 109.47368 * 329.99495 * 24 22 20 43 43 H 1.08993 * 109.46895 * 60.00441 * 26 25 24 44 44 H 1.08994 * 109.46803 * 180.02562 * 26 25 24 45 45 H 1.09002 * 109.46827 * 300.00656 * 26 25 24 46 46 H 1.09005 * 109.47645 * 59.99721 * 27 25 24 47 47 H 1.08998 * 109.47466 * 180.02562 * 27 25 24 48 48 H 1.09000 * 109.47438 * 299.99795 * 27 25 24 49 49 H 1.09006 * 109.47157 * 59.99748 * 28 25 24 50 50 H 1.09002 * 109.47457 * 179.97438 * 28 25 24 51 51 H 1.08996 * 109.47319 * 300.00074 * 28 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2934 2.3744 0.0005 5 6 1.9229 3.6057 0.0011 6 6 1.1021 4.8696 0.0011 7 8 1.1356 5.4593 -1.3001 8 14 -0.6592 4.4663 0.4548 9 1 -0.6942 3.8534 1.8070 10 1 -1.2195 3.5123 -0.5357 11 1 -1.4682 5.7117 0.4542 12 6 3.3029 3.6797 -0.0045 13 7 3.9715 5.0003 -0.0104 14 8 5.1876 5.0671 -0.0158 15 8 3.3055 6.0200 -0.0099 16 6 4.0605 2.5230 0.0008 17 6 3.4363 1.2862 0.0002 18 8 4.1799 0.1476 0.0001 19 6 5.6007 0.3006 0.0003 20 6 6.2522 -1.0583 0.0009 21 8 5.5673 -2.0591 0.0007 22 7 7.5961 -1.1613 0.0016 23 6 8.4234 0.0478 0.0012 24 6 8.2294 -2.4822 0.0016 25 14 8.4989 -3.0419 -1.7548 26 6 9.6025 -1.8241 -2.6322 27 6 9.3037 -4.7220 -1.7547 28 6 6.8593 -3.1395 -2.6339 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 0.2149 2.3193 0.0005 33 1 1.5133 5.5699 0.7281 34 1 0.6276 6.2788 -1.3738 35 1 5.1388 2.5835 0.0009 36 1 5.9070 0.8504 -0.8896 37 1 5.9069 0.8504 0.8903 38 1 8.6281 0.3482 1.0288 39 1 9.3633 -0.1553 -0.5120 40 1 7.8944 0.8499 -0.5134 41 1 9.1888 -2.4253 0.5160 42 1 7.5838 -3.1948 0.5150 43 1 10.5618 -1.7671 -2.1179 44 1 9.7598 -2.1513 -3.6599 45 1 9.1312 -0.8412 -2.6322 46 1 8.6577 -5.4344 -1.2414 47 1 9.4618 -5.0493 -2.7823 48 1 10.2630 -4.6655 -1.2402 49 1 6.3880 -2.1566 -2.6340 50 1 7.0169 -3.4665 -3.6617 51 1 6.2136 -3.8519 -2.1206 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:50:06 Heat of formation + Delta-G solvation = -130.827271 kcal Electronic energy + Delta-G solvation = -35105.512055 eV Core-core repulsion = 30327.285127 eV Total energy + Delta-G solvation = -4778.226928 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 386.161 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.20160 -42.07500 -41.03520 -39.65712 -39.07354 -37.57793 -37.06790 -36.59414 -32.77731 -32.57062 -30.71085 -29.59365 -29.06148 -28.84155 -28.40240 -28.14498 -27.82953 -26.56816 -25.52766 -23.79003 -23.01920 -20.66809 -20.65181 -19.57450 -19.46677 -18.79970 -18.46265 -18.18695 -18.06607 -17.89444 -17.55826 -17.08702 -16.86921 -16.61785 -16.21238 -15.97168 -15.61652 -15.12994 -14.80248 -14.54161 -14.41104 -14.30694 -14.21278 -14.15046 -14.05202 -13.87879 -13.83733 -13.71682 -13.46764 -13.29731 -13.20210 -13.07672 -13.04795 -12.97259 -12.68217 -12.53943 -12.47631 -12.38170 -12.22373 -12.19708 -11.92169 -11.80614 -11.73339 -11.01367 -10.85268 -10.76215 -10.49598 -10.29873 -9.47476 -9.33936 -1.16700 -0.44668 0.36844 0.47091 0.88821 1.14545 1.22682 1.27712 1.35727 1.68159 1.69215 1.75602 1.79550 1.83008 1.91646 2.25627 2.56038 2.87221 3.06408 3.24836 3.32632 3.44137 3.62528 3.65385 3.72636 3.84843 3.90576 3.93582 3.96297 3.98993 4.19204 4.23702 4.27423 4.28966 4.40023 4.52291 4.61790 4.62373 4.62967 4.68181 4.69840 4.72412 4.81324 4.87004 4.92123 5.23304 5.38774 5.46821 5.50004 5.51474 5.66319 5.96788 6.14460 6.50279 6.82810 7.03923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.284 6.284 3 C 0.171 3.829 4 C -0.186 4.186 5 C 0.005 3.995 6 C -0.090 4.090 7 O -0.533 6.533 8 Si 0.932 3.068 9 H -0.244 1.244 10 H -0.246 1.246 11 H -0.242 1.242 12 C -0.023 4.023 13 N 0.037 4.963 14 O -0.175 6.175 15 O -0.134 6.134 16 C -0.119 4.119 17 C 0.110 3.890 18 O -0.264 6.264 19 C 0.032 3.968 20 C 0.509 3.491 21 O -0.503 6.503 22 N -0.595 5.595 23 C 0.062 3.938 24 C -0.178 4.178 25 Si 0.998 3.002 26 C -0.447 4.447 27 C -0.448 4.448 28 C -0.440 4.440 29 H 0.063 0.937 30 H 0.064 0.936 31 H 0.115 0.885 32 H 0.159 0.841 33 H 0.103 0.897 34 H 0.388 0.612 35 H 0.167 0.833 36 H 0.099 0.901 37 H 0.098 0.902 38 H 0.064 0.936 39 H 0.085 0.915 40 H 0.074 0.926 41 H 0.087 0.913 42 H 0.094 0.906 43 H 0.069 0.931 44 H 0.071 0.929 45 H 0.068 0.932 46 H 0.071 0.929 47 H 0.071 0.929 48 H 0.069 0.931 49 H 0.062 0.938 50 H 0.064 0.936 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.008 -0.055 0.848 0.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.195 6.195 3 C 0.123 3.877 4 C -0.205 4.205 5 C 0.004 3.996 6 C -0.200 4.200 7 O -0.339 6.339 8 Si 0.753 3.247 9 H -0.167 1.167 10 H -0.169 1.169 11 H -0.165 1.165 12 C -0.107 4.107 13 N 0.555 4.445 14 O -0.385 6.385 15 O -0.355 6.355 16 C -0.139 4.139 17 C 0.063 3.937 18 O -0.176 6.176 19 C -0.047 4.047 20 C 0.295 3.705 21 O -0.376 6.376 22 N -0.330 5.330 23 C -0.081 4.081 24 C -0.346 4.346 25 Si 1.194 2.806 26 C -0.555 4.555 27 C -0.556 4.556 28 C -0.548 4.548 29 H 0.081 0.919 30 H 0.083 0.917 31 H 0.133 0.867 32 H 0.176 0.824 33 H 0.121 0.879 34 H 0.237 0.763 35 H 0.184 0.816 36 H 0.116 0.884 37 H 0.116 0.884 38 H 0.083 0.917 39 H 0.104 0.896 40 H 0.093 0.907 41 H 0.105 0.895 42 H 0.113 0.887 43 H 0.088 0.912 44 H 0.090 0.910 45 H 0.087 0.913 46 H 0.090 0.910 47 H 0.091 0.909 48 H 0.088 0.912 49 H 0.081 0.919 50 H 0.084 0.916 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -1.130 -2.378 0.995 2.815 hybrid contribution 0.363 1.330 0.052 1.379 sum -0.768 -1.049 1.048 1.669 Atomic orbital electron populations 1.23392 0.76995 1.05679 1.01996 1.86336 1.22304 1.24255 1.86579 1.18400 0.89058 0.85774 0.94506 1.21010 1.01173 0.89828 1.08525 1.18875 0.90706 0.95011 0.95058 1.24924 1.09280 0.94399 0.91411 1.86446 1.76603 1.43937 1.26952 0.85984 0.75342 0.82359 0.80996 1.16743 1.16945 1.16469 1.20348 0.91836 0.83133 1.15385 1.43277 1.00927 1.02510 0.97740 1.94541 0.95749 1.93719 1.54511 1.94494 1.64677 1.24239 1.52044 1.20769 1.02137 0.88910 1.02052 1.17836 0.88344 0.85411 1.02113 1.86333 1.16953 1.25971 1.88359 1.22742 0.80030 0.97579 1.04314 1.19755 0.82296 0.90128 0.78307 1.90775 1.61929 1.37653 1.47282 1.47319 1.04697 1.07312 1.73706 1.22068 0.96656 0.86484 1.02860 1.26594 1.01016 0.87091 1.19872 0.79627 0.67612 0.67392 0.66006 1.26144 1.09813 1.11199 1.08304 1.26076 1.07385 1.17408 1.04751 1.26066 1.16723 1.04609 1.07417 0.91862 0.91713 0.86688 0.82429 0.87950 0.76339 0.81599 0.88365 0.88377 0.91736 0.89624 0.90727 0.89488 0.88718 0.91158 0.90986 0.91282 0.90997 0.90935 0.91151 0.91871 0.91640 0.90801 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.51 10.28 -34.21 -0.35 -0.87 16 3 C 0.17 0.27 6.70 -39.12 -0.26 0.01 16 4 C -0.19 -0.07 7.65 -39.46 -0.30 -0.37 16 5 C 0.01 0.01 5.29 -104.61 -0.55 -0.55 16 6 C -0.09 0.01 1.73 36.01 0.06 0.07 16 7 O -0.53 -0.21 11.75 -55.61 -0.65 -0.87 16 8 Si 0.93 -1.56 25.49 -169.99 -4.33 -5.89 16 9 H -0.24 0.34 7.11 56.52 0.40 0.74 16 10 H -0.25 0.37 6.73 56.52 0.38 0.75 16 11 H -0.24 0.37 7.11 56.52 0.40 0.78 16 12 C -0.02 -0.05 6.84 -79.95 -0.55 -0.60 16 13 N 0.04 0.15 4.45 33.96 0.15 0.30 16 14 O -0.17 -0.81 18.44 -29.46 -0.54 -1.36 16 15 O -0.13 -0.58 14.61 -36.00 -0.53 -1.11 16 16 C -0.12 -0.10 8.54 -39.46 -0.34 -0.43 16 17 C 0.11 0.19 6.70 -39.12 -0.26 -0.07 16 18 O -0.26 -0.71 9.46 -47.32 -0.45 -1.16 16 19 C 0.03 -0.02 3.77 36.01 0.14 0.12 16 20 C 0.51 0.79 7.30 -10.98 -0.08 0.71 16 21 O -0.50 -2.85 15.53 -14.35 -0.22 -3.07 16 22 N -0.59 0.68 2.38 -119.16 -0.28 0.39 16 23 C 0.06 -0.27 10.00 59.85 0.60 0.33 16 24 C -0.18 0.26 4.65 59.84 0.28 0.53 16 25 Si 1.00 -2.19 12.32 -169.99 -2.09 -4.29 16 26 C -0.45 1.08 7.96 101.05 0.80 1.88 16 27 C -0.45 0.68 8.65 101.05 0.87 1.55 16 28 C -0.44 -0.37 8.18 101.05 0.83 0.45 16 29 H 0.06 -0.23 7.66 -51.93 -0.40 -0.63 16 30 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 31 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 32 H 0.16 -0.25 3.12 -52.49 -0.16 -0.42 16 33 H 0.10 -0.05 6.09 -51.93 -0.32 -0.37 16 34 H 0.39 -1.51 8.74 45.56 0.40 -1.12 16 35 H 0.17 -0.25 5.85 -52.49 -0.31 -0.55 16 36 H 0.10 -0.31 6.92 -51.93 -0.36 -0.67 16 37 H 0.10 -0.30 7.63 -51.93 -0.40 -0.70 16 38 H 0.06 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.09 -0.45 6.82 -51.93 -0.35 -0.81 16 40 H 0.07 -0.43 6.44 -51.93 -0.33 -0.76 16 41 H 0.09 -0.29 7.89 -51.93 -0.41 -0.70 16 42 H 0.09 0.03 7.24 -51.93 -0.38 -0.35 16 43 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 44 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 45 H 0.07 -0.18 7.46 -51.93 -0.39 -0.56 16 46 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 47 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 48 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 49 H 0.06 0.12 7.78 -51.93 -0.40 -0.28 16 50 H 0.06 0.02 7.96 -51.93 -0.41 -0.39 16 51 H 0.07 0.17 7.96 -51.93 -0.41 -0.24 16 LS Contribution 418.77 15.07 6.31 6.31 Total: 0.00 -10.67 418.77 -7.53 -18.20 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -6.76 Total: -11.18 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: 2.23 Total: 4.59 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.13 Total: 0.69 kcal Atomic # 8 Polarization: -5.69 SS G_CDS: -2.74 Total: -8.43 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: -6.43 Total: -10.18 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -10.67 -7.53 -18.20 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.628 kcal (2) G-P(sol) polarization free energy of solvation -10.673 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.301 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds