Wall clock time and date at job start Sat Mar 6 2021 14:54:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.46499 * 119.99537 * 2 1 4 4 Si 1.86307 * 109.47089 * 269.99427 * 3 2 1 5 5 C 1.86306 * 109.46697 * 60.00384 * 4 3 2 6 6 C 1.86297 * 109.47253 * 180.02562 * 4 3 2 7 7 C 1.86293 * 109.47221 * 300.00561 * 4 3 2 8 8 C 1.34777 * 120.00264 * 179.97438 * 2 1 3 9 9 O 1.21283 * 119.99750 * 180.02562 * 8 2 1 10 10 C 1.50702 * 119.99928 * 0.28128 * 8 2 1 11 11 O 1.42899 * 109.46876 * 179.72354 * 10 8 2 12 12 C 1.35897 * 116.99793 * 179.97438 * 11 10 8 13 13 C 1.38712 * 120.05594 * 359.72146 * 12 11 10 14 14 C 1.38170 * 119.94613 * 179.72127 * 13 12 11 15 15 C 1.38247 * 120.05291 * 0.57637 * 14 13 12 16 16 C 1.38293 * 120.11265 * 359.67904 * 15 14 13 17 17 C 1.50698 * 119.97348 * 180.02562 * 16 15 14 18 18 O 1.42898 * 109.47035 * 245.02192 * 17 16 15 19 19 Si 1.86293 * 109.47004 * 5.02375 * 17 16 15 20 20 H 1.48502 * 109.47224 * 59.99710 * 19 17 16 21 21 H 1.48505 * 109.47195 * 179.97438 * 19 17 16 22 22 H 1.48497 * 109.47320 * 299.99626 * 19 17 16 23 23 C 1.38123 * 120.05275 * 0.04378 * 16 15 14 24 24 H 1.08998 * 109.46921 * 269.99744 * 1 2 3 25 25 H 1.08994 * 109.46996 * 30.00327 * 1 2 3 26 26 H 1.09001 * 109.46578 * 150.00190 * 1 2 3 27 27 H 1.09001 * 109.47567 * 29.99407 * 3 2 1 28 28 H 1.09005 * 109.47076 * 149.99913 * 3 2 1 29 29 H 1.08994 * 109.47514 * 59.99942 * 5 4 3 30 30 H 1.09001 * 109.46663 * 180.02562 * 5 4 3 31 31 H 1.09007 * 109.47099 * 299.99651 * 5 4 3 32 32 H 1.08996 * 109.46991 * 60.00130 * 6 4 3 33 33 H 1.09002 * 109.47110 * 180.02562 * 6 4 3 34 34 H 1.09006 * 109.47285 * 300.00448 * 6 4 3 35 35 H 1.09002 * 109.47647 * 59.99045 * 7 4 3 36 36 H 1.09001 * 109.47589 * 179.97438 * 7 4 3 37 37 H 1.09005 * 109.47034 * 299.99569 * 7 4 3 38 38 H 1.09004 * 109.46965 * 299.72211 * 10 8 2 39 39 H 1.08994 * 109.46990 * 59.72065 * 10 8 2 40 40 H 1.08001 * 120.02969 * 0.02562 * 13 12 11 41 41 H 1.07998 * 119.97642 * 180.27891 * 14 13 12 42 42 H 1.08001 * 119.94442 * 179.69669 * 15 14 13 43 43 H 1.09001 * 109.46804 * 125.02259 * 17 16 15 44 44 H 0.96701 * 113.99801 * 60.00721 * 18 17 16 45 45 H 1.08003 * 120.02893 * 180.02562 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 14 2.5081 1.8065 -1.7565 5 6 0.8802 2.0292 -2.6348 6 6 3.4401 3.4196 -1.7566 7 6 3.5149 0.5082 -2.6346 8 6 2.1390 -1.1672 0.0005 9 8 3.3518 -1.1671 0.0010 10 6 1.3855 -2.4723 -0.0053 11 8 2.3142 -3.5584 -0.0100 12 6 1.7949 -4.8142 -0.0151 13 6 0.4199 -4.9973 -0.0096 14 6 -0.1057 -6.2751 -0.0206 15 6 0.7375 -7.3706 -0.0250 16 6 2.1087 -7.1907 -0.0251 17 6 3.0250 -8.3871 -0.0304 18 8 3.7670 -8.4242 1.1903 19 14 2.0134 -9.9433 -0.1898 20 1 1.2423 -9.9047 -1.4584 21 1 2.9164 -11.1223 -0.1957 22 1 1.0753 -10.0436 0.9569 23 6 2.6391 -5.9154 -0.0199 24 1 -0.3633 0.0000 1.0277 25 1 -0.3633 0.8899 -0.5139 26 1 -0.3632 -0.8900 -0.5138 27 1 1.6083 2.0285 0.5137 28 1 3.1499 1.1385 0.5139 29 1 0.2910 2.7888 -2.1210 30 1 1.0619 2.3434 -3.6626 31 1 0.3352 1.0851 -2.6348 32 1 4.3925 3.2889 -1.2428 33 1 3.6214 3.7344 -2.7843 34 1 2.8513 4.1795 -1.2426 35 1 2.9700 -0.4359 -2.6345 36 1 3.6963 0.8225 -3.6625 37 1 4.4674 0.3779 -2.1208 38 1 0.7588 -2.5340 0.8844 39 1 0.7590 -2.5261 -0.8955 40 1 -0.2393 -4.1419 -0.0018 41 1 -1.1762 -6.4183 -0.0209 42 1 0.3248 -8.3686 -0.0286 43 1 3.7136 -8.3135 -0.8721 44 1 3.2171 -8.4896 1.9830 45 1 3.7100 -5.7753 -0.0204 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:54:27 Heat of formation + Delta-G solvation = -110.625773 kcal Electronic energy + Delta-G solvation = -23781.215749 eV Core-core repulsion = 20309.101070 eV Total energy + Delta-G solvation = -3472.114679 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.151 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.56074 -40.59423 -38.94626 -37.22672 -36.54913 -32.49714 -31.83379 -30.22786 -29.53668 -28.83346 -28.39139 -28.10451 -26.94820 -26.07955 -23.70622 -22.41196 -20.41687 -19.37552 -18.34005 -17.71370 -17.66599 -17.33123 -17.09085 -16.50107 -16.27421 -16.05603 -15.51152 -14.98311 -14.76734 -14.42682 -14.37479 -14.29461 -14.17768 -14.05903 -13.92911 -13.84935 -13.65793 -13.47390 -13.29630 -13.20248 -13.06222 -13.02913 -12.95522 -12.55410 -12.23669 -12.12651 -11.95868 -11.71259 -11.54178 -10.98829 -10.83656 -10.71111 -10.46099 -9.93655 -9.31925 -9.26298 0.19231 0.39461 1.12471 1.32302 1.43358 1.44178 1.52417 1.71452 1.81749 1.88377 1.93140 2.46500 2.57290 2.66040 3.29875 3.48668 3.63779 3.69178 3.82965 3.87385 3.95377 3.99046 4.16253 4.23302 4.27858 4.37479 4.49822 4.54166 4.61335 4.61736 4.65462 4.68668 4.70559 4.82862 4.88605 4.93572 4.96391 5.21944 5.28622 5.33869 5.37753 5.42417 5.47629 5.64588 5.68028 6.14168 6.34422 6.55754 7.09963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.596 5.596 3 C -0.178 4.178 4 Si 0.998 3.002 5 C -0.446 4.446 6 C -0.448 4.448 7 C -0.440 4.440 8 C 0.507 3.493 9 O -0.505 6.505 10 C 0.042 3.958 11 O -0.288 6.288 12 C 0.130 3.870 13 C -0.207 4.207 14 C -0.072 4.072 15 C -0.163 4.163 16 C -0.080 4.080 17 C -0.083 4.083 18 O -0.536 6.536 19 Si 0.956 3.044 20 H -0.250 1.250 21 H -0.254 1.254 22 H -0.252 1.252 23 C -0.118 4.118 24 H 0.062 0.938 25 H 0.084 0.916 26 H 0.073 0.927 27 H 0.085 0.915 28 H 0.094 0.906 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.067 0.933 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.069 0.931 35 H 0.062 0.938 36 H 0.064 0.936 37 H 0.073 0.927 38 H 0.093 0.907 39 H 0.093 0.907 40 H 0.129 0.871 41 H 0.130 0.870 42 H 0.123 0.877 43 H 0.120 0.880 44 H 0.377 0.623 45 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.806 1.940 -0.308 7.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.332 5.332 3 C -0.346 4.346 4 Si 1.194 2.806 5 C -0.554 4.554 6 C -0.556 4.556 7 C -0.548 4.548 8 C 0.293 3.707 9 O -0.379 6.379 10 C -0.037 4.037 11 O -0.200 6.200 12 C 0.084 3.916 13 C -0.226 4.226 14 C -0.090 4.090 15 C -0.181 4.181 16 C -0.080 4.080 17 C -0.194 4.194 18 O -0.341 6.341 19 Si 0.779 3.221 20 H -0.174 1.174 21 H -0.178 1.178 22 H -0.176 1.176 23 C -0.136 4.136 24 H 0.081 0.919 25 H 0.102 0.898 26 H 0.091 0.909 27 H 0.104 0.896 28 H 0.113 0.887 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.091 0.909 34 H 0.088 0.912 35 H 0.081 0.919 36 H 0.083 0.917 37 H 0.092 0.908 38 H 0.111 0.889 39 H 0.111 0.889 40 H 0.147 0.853 41 H 0.148 0.852 42 H 0.141 0.859 43 H 0.138 0.862 44 H 0.224 0.776 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -5.932 1.280 -0.757 6.115 hybrid contribution -0.724 0.554 0.471 1.026 sum -6.656 1.834 -0.287 6.910 Atomic orbital electron populations 1.22026 0.79133 1.04028 1.02655 1.47333 1.06849 1.05134 1.73908 1.26584 1.00910 0.87288 1.19820 0.79627 0.67675 0.67299 0.66047 1.26141 1.16530 1.04424 1.08306 1.26077 1.08680 1.16124 1.04740 1.26065 1.09690 1.11679 1.07386 1.19948 0.88191 0.84495 0.78041 1.90765 1.13236 1.86590 1.47306 1.22530 0.92103 0.85336 1.03730 1.86174 1.33892 1.11423 1.88503 1.19060 0.91971 0.84242 0.96286 1.21285 0.93661 0.98802 1.08807 1.20879 0.99945 0.91462 0.96722 1.20988 0.92928 0.99205 1.04999 1.20124 0.93907 0.94857 0.99147 1.25058 1.00271 1.03020 0.91017 1.86542 1.35881 1.96734 1.14926 0.85595 0.78342 0.76527 0.81659 1.17368 1.17814 1.17556 1.20281 1.00404 0.89097 1.03856 0.91933 0.89773 0.90859 0.89603 0.88747 0.91197 0.90990 0.91334 0.90977 0.90940 0.91173 0.91855 0.91651 0.90784 0.88939 0.88913 0.85310 0.85201 0.85939 0.86197 0.77616 0.84418 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.28 10.01 59.85 0.60 0.32 16 2 N -0.60 0.54 2.38 -119.16 -0.28 0.26 16 3 C -0.18 0.21 4.65 59.85 0.28 0.49 16 4 Si 1.00 -2.07 12.33 -169.99 -2.10 -4.17 16 5 C -0.45 1.10 7.97 101.05 0.80 1.91 16 6 C -0.45 0.63 8.65 101.05 0.87 1.50 16 7 C -0.44 -0.46 8.18 101.05 0.83 0.36 16 8 C 0.51 1.01 7.31 -10.98 -0.08 0.93 16 9 O -0.51 -3.17 15.53 -14.35 -0.22 -3.39 16 10 C 0.04 -0.01 3.77 36.01 0.14 0.13 16 11 O -0.29 -1.00 9.67 -39.32 -0.38 -1.38 16 12 C 0.13 0.30 6.69 -39.21 -0.26 0.04 16 13 C -0.21 -0.01 9.04 -39.43 -0.36 -0.37 16 14 C -0.07 0.02 10.04 -39.60 -0.40 -0.37 16 15 C -0.16 -0.05 8.67 -39.56 -0.34 -0.39 16 16 C -0.08 -0.09 5.35 -104.64 -0.56 -0.65 16 17 C -0.08 -0.01 2.80 36.00 0.10 0.09 16 18 O -0.54 -0.52 12.83 -35.23 -0.45 -0.98 16 19 Si 0.96 -0.51 25.14 -169.99 -4.27 -4.78 16 20 H -0.25 0.00 7.11 56.52 0.40 0.41 16 21 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 22 H -0.25 0.14 7.04 56.52 0.40 0.54 16 23 C -0.12 -0.29 9.62 -39.43 -0.38 -0.67 16 24 H 0.06 -0.31 8.14 -51.93 -0.42 -0.73 16 25 H 0.08 -0.46 6.82 -51.93 -0.35 -0.81 16 26 H 0.07 -0.43 6.43 -51.93 -0.33 -0.77 16 27 H 0.09 -0.27 7.89 -51.93 -0.41 -0.68 16 28 H 0.09 0.06 7.24 -51.93 -0.38 -0.31 16 29 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.18 7.46 -51.93 -0.39 -0.57 16 32 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 33 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 34 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 35 H 0.06 0.14 7.78 -51.93 -0.40 -0.27 16 36 H 0.06 0.03 7.96 -51.93 -0.41 -0.38 16 37 H 0.07 0.20 7.96 -51.93 -0.41 -0.22 16 38 H 0.09 -0.23 7.62 -51.93 -0.40 -0.62 16 39 H 0.09 -0.26 6.93 -51.93 -0.36 -0.62 16 40 H 0.13 -0.34 6.30 -52.49 -0.33 -0.67 16 41 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 42 H 0.12 -0.13 4.86 -52.49 -0.26 -0.38 16 43 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 44 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 45 H 0.14 0.40 8.06 -52.48 -0.42 -0.02 16 LS Contribution 367.86 15.07 5.54 5.54 Total: 0.00 -8.47 367.86 -7.51 -15.98 By element: Atomic # 1 Polarization: -3.82 SS G_CDS: -6.59 Total: -10.40 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: 1.24 Total: 3.32 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.28 Total: 0.26 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -1.06 Total: -5.74 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: -6.37 Total: -8.95 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.47 -7.51 -15.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.651 kcal (2) G-P(sol) polarization free energy of solvation -8.468 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds