Wall clock time and date at job start Sat Mar 6 2021 14:54:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35898 * 117.00037 * 2 1 4 4 C 1.38748 * 120.02844 * 0.02562 * 3 2 1 5 5 C 1.38200 * 120.05718 * 179.72051 * 4 3 2 6 6 C 1.38156 * 120.10581 * 0.51689 * 5 4 3 7 7 C 1.50697 * 119.97228 * 179.76717 * 6 5 4 8 8 O 1.42906 * 109.46831 * 254.72329 * 7 6 5 9 9 Si 1.86300 * 109.47007 * 14.71718 * 7 6 5 10 10 H 1.48503 * 109.46942 * 60.00611 * 9 7 6 11 11 H 1.48503 * 109.47276 * 180.02562 * 9 7 6 12 12 H 1.48494 * 109.47372 * 300.00074 * 9 7 6 13 13 C 1.38791 * 120.05409 * 359.48303 * 6 5 4 14 14 O 1.35896 * 120.02634 * 180.27722 * 13 6 5 15 15 C 1.42906 * 116.99850 * 180.02562 * 14 13 6 16 16 C 1.50701 * 109.46791 * 179.97438 * 15 14 13 17 17 O 1.21286 * 120.00390 * 0.02562 * 16 15 14 18 18 N 1.34777 * 119.99873 * 179.97438 * 16 15 14 19 19 C 1.46499 * 119.99900 * 0.02562 * 18 16 15 20 20 C 1.46505 * 120.00037 * 179.97438 * 18 16 15 21 21 Si 1.86295 * 109.46751 * 90.00707 * 20 18 16 22 22 C 1.86298 * 109.47486 * 60.00065 * 21 20 18 23 23 C 1.86307 * 109.47073 * 180.02562 * 21 20 18 24 24 C 1.86302 * 109.47213 * 299.99706 * 21 20 18 25 25 C 1.38620 * 119.94745 * 0.25955 * 13 6 5 26 26 H 1.09003 * 109.47090 * 59.99958 * 1 2 3 27 27 H 1.09004 * 109.46855 * 179.97438 * 1 2 3 28 28 H 1.08997 * 109.47421 * 300.00184 * 1 2 3 29 29 H 1.08008 * 119.97336 * 359.97438 * 4 3 2 30 30 H 1.08000 * 119.94710 * 180.27901 * 5 4 3 31 31 H 1.09000 * 109.47374 * 134.71902 * 7 6 5 32 32 H 0.96693 * 114.00047 * 60.00191 * 8 7 6 33 33 H 1.08993 * 109.47249 * 300.00194 * 15 14 13 34 34 H 1.08995 * 109.46882 * 60.00797 * 15 14 13 35 35 H 1.09006 * 109.46886 * 90.00020 * 19 18 16 36 36 H 1.08999 * 109.47234 * 209.99345 * 19 18 16 37 37 H 1.08996 * 109.47286 * 330.00018 * 19 18 16 38 38 H 1.08996 * 109.46859 * 210.00259 * 20 18 16 39 39 H 1.08997 * 109.47021 * 330.00615 * 20 18 16 40 40 H 1.08996 * 109.47491 * 59.99611 * 22 21 20 41 41 H 1.09001 * 109.47726 * 180.02562 * 22 21 20 42 42 H 1.09009 * 109.47030 * 299.99729 * 22 21 20 43 43 H 1.08997 * 109.46932 * 59.99765 * 23 21 20 44 44 H 1.09001 * 109.46938 * 180.02562 * 23 21 20 45 45 H 1.08996 * 109.46625 * 299.99606 * 23 21 20 46 46 H 1.09009 * 109.47050 * 60.00425 * 24 21 20 47 47 H 1.09001 * 109.47108 * 179.97438 * 24 21 20 48 48 H 1.08997 * 109.47291 * 300.00541 * 24 21 20 49 49 H 1.07995 * 120.05190 * 179.97438 * 25 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2909 2.3749 0.0005 5 6 1.9176 3.6065 0.0064 6 6 3.2971 3.6821 0.0009 7 6 3.9774 5.0268 0.0020 8 8 4.5039 5.2953 -1.2992 9 14 2.7438 6.3465 0.4571 10 1 2.1967 6.0675 1.8092 11 1 3.4140 7.6717 0.4576 12 1 1.6372 6.3524 -0.5331 13 6 4.0569 2.5206 0.0004 14 8 5.4138 2.5956 0.0007 15 6 6.1318 1.3601 -0.0005 16 6 7.6127 1.6397 -0.0006 17 8 8.0137 2.7844 0.0007 18 7 8.4914 0.6178 -0.0011 19 6 8.0070 -0.7648 -0.0021 20 6 9.9310 0.8897 -0.0017 21 14 10.5420 1.0045 1.7544 22 6 10.2145 -0.6056 2.6326 23 6 12.3726 1.3510 1.7537 24 6 9.6500 2.3839 2.6334 25 6 3.4305 1.2840 -0.0001 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 0.2123 2.3184 0.0005 30 1 1.3281 4.5115 0.0113 31 1 4.7897 5.0225 0.7288 32 1 3.8355 5.3143 -1.9976 33 1 5.8700 0.7868 0.8888 34 1 5.8704 0.7888 -0.8911 35 1 7.8871 -1.1070 -1.0301 36 1 8.7268 -1.4023 0.5114 37 1 7.0469 -0.8138 0.5115 38 1 10.4529 0.0826 -0.5159 39 1 10.1226 1.8317 -0.5155 40 1 10.7363 -1.4126 2.1184 41 1 10.5715 -0.5382 3.6602 42 1 9.1433 -0.8078 2.6330 43 1 12.5638 2.2931 1.2401 44 1 12.7301 1.4177 2.7813 45 1 12.8947 0.5442 1.2394 46 1 8.5788 2.1816 2.6338 47 1 10.0071 2.4508 3.6610 48 1 9.8416 3.3259 2.1196 49 1 4.0201 0.3792 -0.0009 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:54:50 Heat of formation + Delta-G solvation = -142.817218 kcal Electronic energy + Delta-G solvation = -28589.864190 eV Core-core repulsion = 24642.133775 eV Total energy + Delta-G solvation = -3947.730415 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 341.166 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.79162 -40.83345 -39.79639 -38.20466 -36.83892 -36.46608 -32.27533 -31.55940 -30.24697 -29.51232 -28.80252 -28.52075 -28.35238 -28.04658 -26.28429 -26.03902 -23.49776 -22.42198 -20.40372 -19.97569 -18.34843 -17.93572 -17.80736 -17.64298 -17.19893 -16.82081 -16.69189 -16.52617 -16.17726 -15.71463 -15.49567 -15.13828 -14.80413 -14.43093 -14.28357 -14.23718 -14.11898 -13.99180 -13.83905 -13.80461 -13.63222 -13.49701 -13.39210 -13.26347 -13.20796 -13.09404 -13.02330 -12.89707 -12.54439 -12.29999 -12.09090 -11.91949 -11.70651 -11.60255 -11.51378 -10.94216 -10.79202 -10.64181 -10.19048 -9.67276 -9.25069 -9.05095 0.22457 0.35473 1.26679 1.36308 1.47469 1.49655 1.60234 1.76828 1.85871 1.93479 2.00633 2.16697 2.51497 2.60680 2.61839 3.37316 3.65026 3.70492 3.77534 3.88666 3.94415 4.01869 4.03286 4.04779 4.14311 4.26580 4.29370 4.32895 4.40644 4.42050 4.52776 4.56465 4.65207 4.65754 4.72077 4.73996 4.79725 4.87294 4.93101 4.98409 5.05888 5.24743 5.28727 5.34837 5.41685 5.47621 5.51218 5.72057 6.12726 6.25514 6.37928 6.79783 7.17859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.239 4.239 5 C -0.048 4.048 6 C -0.185 4.185 7 C -0.065 4.065 8 O -0.531 6.531 9 Si 0.947 3.053 10 H -0.250 1.250 11 H -0.252 1.252 12 H -0.253 1.253 13 C 0.195 3.805 14 O -0.270 6.270 15 C 0.038 3.962 16 C 0.508 3.492 17 O -0.501 6.501 18 N -0.597 5.597 19 C 0.064 3.936 20 C -0.177 4.177 21 Si 0.997 3.003 22 C -0.446 4.446 23 C -0.448 4.448 24 C -0.440 4.440 25 C -0.247 4.247 26 H 0.059 0.941 27 H 0.103 0.897 28 H 0.059 0.941 29 H 0.134 0.866 30 H 0.133 0.867 31 H 0.117 0.883 32 H 0.369 0.631 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.062 0.938 36 H 0.083 0.917 37 H 0.073 0.927 38 H 0.085 0.915 39 H 0.094 0.906 40 H 0.069 0.931 41 H 0.071 0.929 42 H 0.068 0.932 43 H 0.071 0.929 44 H 0.071 0.929 45 H 0.069 0.931 46 H 0.063 0.937 47 H 0.064 0.936 48 H 0.073 0.927 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.638 -5.684 0.475 6.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.258 4.258 5 C -0.066 4.066 6 C -0.186 4.186 7 C -0.176 4.176 8 O -0.335 6.335 9 Si 0.770 3.230 10 H -0.173 1.173 11 H -0.176 1.176 12 H -0.177 1.177 13 C 0.149 3.851 14 O -0.181 6.181 15 C -0.041 4.041 16 C 0.293 3.707 17 O -0.374 6.374 18 N -0.333 5.333 19 C -0.078 4.078 20 C -0.345 4.345 21 Si 1.193 2.807 22 C -0.554 4.554 23 C -0.556 4.556 24 C -0.548 4.548 25 C -0.267 4.267 26 H 0.077 0.923 27 H 0.121 0.879 28 H 0.077 0.923 29 H 0.152 0.848 30 H 0.151 0.849 31 H 0.135 0.865 32 H 0.216 0.784 33 H 0.112 0.888 34 H 0.112 0.888 35 H 0.080 0.920 36 H 0.102 0.898 37 H 0.092 0.908 38 H 0.103 0.897 39 H 0.113 0.887 40 H 0.088 0.912 41 H 0.090 0.910 42 H 0.087 0.913 43 H 0.090 0.910 44 H 0.090 0.910 45 H 0.088 0.912 46 H 0.082 0.918 47 H 0.083 0.917 48 H 0.093 0.907 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.253 -4.421 0.998 5.061 hybrid contribution -0.638 -0.833 -0.492 1.159 sum -2.891 -5.254 0.506 6.018 Atomic orbital electron populations 1.23142 0.77645 1.04396 1.01753 1.86073 1.21980 1.26672 1.88029 1.18677 0.91464 0.84349 0.92713 1.21097 1.00406 0.91781 1.12520 1.20742 0.92778 0.97858 0.95188 1.19546 0.92647 0.94669 1.11738 1.24772 1.05914 0.97346 0.89538 1.86616 1.37305 1.93570 1.15972 0.85799 0.77412 0.78796 0.80986 1.17318 1.17587 1.17738 1.18381 0.82100 0.92326 0.92342 1.86268 1.14562 1.29730 1.87572 1.22592 0.90681 0.86926 1.03893 1.19908 0.87157 0.85467 0.78122 1.90778 1.79308 1.20315 1.47043 1.47325 1.05849 1.06069 1.74049 1.22023 1.00983 0.82194 1.02649 1.26567 0.82584 1.05653 1.19725 0.79638 0.67192 0.67756 0.66137 1.26143 1.04772 1.16229 1.08264 1.26076 1.19617 1.05214 1.04703 1.26059 1.07672 1.13715 1.07332 1.20396 0.92878 0.97380 1.16021 0.92271 0.87882 0.92256 0.84818 0.84909 0.86480 0.78446 0.88827 0.88802 0.91961 0.89829 0.90842 0.89665 0.88742 0.91220 0.91030 0.91311 0.90974 0.90975 0.91197 0.91818 0.91704 0.90748 0.84424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.35 10.49 -19.42 -0.20 -0.56 16 3 C 0.17 0.28 6.68 -39.24 -0.26 0.01 16 4 C -0.24 -0.16 9.04 -39.41 -0.36 -0.51 16 5 C -0.05 -0.04 8.65 -39.63 -0.34 -0.39 16 6 C -0.18 -0.43 5.28 -104.45 -0.55 -0.98 16 7 C -0.06 -0.15 2.38 36.00 0.09 -0.06 16 8 O -0.53 -1.75 12.88 -35.23 -0.45 -2.21 16 9 Si 0.95 0.73 25.48 -169.99 -4.33 -3.61 16 10 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 11 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 12 H -0.25 0.00 6.74 56.52 0.38 0.38 16 13 C 0.20 0.55 6.66 -39.24 -0.26 0.29 16 14 O -0.27 -1.04 9.00 -39.32 -0.35 -1.40 16 15 C 0.04 0.02 3.77 36.01 0.14 0.16 16 16 C 0.51 1.26 7.30 -10.98 -0.08 1.18 16 17 O -0.50 -3.34 15.52 -14.36 -0.22 -3.56 16 18 N -0.60 0.25 2.37 -119.16 -0.28 -0.03 16 19 C 0.06 -0.24 10.01 59.85 0.60 0.36 16 20 C -0.18 0.14 4.65 59.85 0.28 0.42 16 21 Si 1.00 -1.73 12.32 -169.99 -2.09 -3.82 16 22 C -0.45 0.94 7.97 101.05 0.81 1.75 16 23 C -0.45 0.49 8.65 101.05 0.87 1.37 16 24 C -0.44 -0.57 8.18 101.05 0.83 0.26 16 25 C -0.25 -0.39 8.97 -39.29 -0.35 -0.74 16 26 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 27 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 28 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 29 H 0.13 -0.20 6.29 -52.48 -0.33 -0.53 16 30 H 0.13 -0.10 4.87 -52.49 -0.26 -0.36 16 31 H 0.12 0.36 7.82 -51.93 -0.41 -0.04 16 32 H 0.37 -0.20 8.70 45.56 0.40 0.20 16 33 H 0.09 -0.19 6.92 -51.93 -0.36 -0.55 16 34 H 0.09 -0.14 7.63 -51.93 -0.40 -0.54 16 35 H 0.06 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.08 -0.41 6.83 -51.93 -0.35 -0.76 16 37 H 0.07 -0.38 6.44 -51.93 -0.33 -0.71 16 38 H 0.08 -0.23 7.89 -51.93 -0.41 -0.64 16 39 H 0.09 0.10 7.24 -51.93 -0.38 -0.27 16 40 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 41 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 42 H 0.07 -0.16 7.47 -51.92 -0.39 -0.54 16 43 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 44 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 45 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 46 H 0.06 0.15 7.78 -51.92 -0.40 -0.26 16 47 H 0.06 0.04 7.96 -51.93 -0.41 -0.37 16 48 H 0.07 0.21 7.96 -51.93 -0.41 -0.20 16 49 H 0.14 -0.06 6.30 -52.49 -0.33 -0.39 16 LS Contribution 396.54 15.07 5.98 5.98 Total: 0.00 -9.18 396.54 -6.88 -16.06 By element: Atomic # 1 Polarization: -3.60 SS G_CDS: -7.30 Total: -10.90 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: 2.39 Total: 4.04 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.28 Total: -0.03 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -1.23 Total: -7.72 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -6.43 Total: -7.43 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -9.18 -6.88 -16.06 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.759 kcal (2) G-P(sol) polarization free energy of solvation -9.180 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.817 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds