Wall clock time and date at job start Sat Mar 6 2021 14:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.38519 * 120.06958 * 359.72831 * 3 2 1 5 5 C 1.38296 * 119.99696 * 179.74377 * 4 3 2 6 6 C 1.50701 * 119.92580 * 180.23141 * 5 4 3 7 7 O 1.42903 * 109.47261 * 300.27493 * 6 5 4 8 8 Si 1.86295 * 109.47147 * 180.27619 * 6 5 4 9 9 H 1.48505 * 109.47118 * 59.99881 * 8 6 5 10 10 H 1.48498 * 109.47234 * 180.02562 * 8 6 5 11 11 H 1.48501 * 109.46989 * 300.00353 * 8 6 5 12 12 C 1.38203 * 120.14679 * 0.51103 * 5 4 3 13 13 C 1.38288 * 120.14554 * 359.76377 * 12 5 4 14 14 C 1.38522 * 119.99990 * 359.97438 * 13 12 5 15 15 O 1.35994 * 120.07549 * 179.97438 * 14 13 12 16 16 C 1.42901 * 116.99839 * 0.02908 * 15 14 13 17 17 C 1.50695 * 109.47370 * 179.97438 * 16 15 14 18 18 O 1.21285 * 119.99773 * 359.97438 * 17 16 15 19 19 N 1.34768 * 120.00497 * 179.97438 * 17 16 15 20 20 C 1.46502 * 119.99767 * 0.02562 * 19 17 16 21 21 C 1.46497 * 120.00646 * 180.02562 * 19 17 16 22 22 Si 1.86293 * 109.47297 * 90.00060 * 21 19 17 23 23 C 1.86305 * 109.47148 * 60.00464 * 22 21 19 24 24 C 1.86307 * 109.47460 * 180.02562 * 22 21 19 25 25 C 1.86303 * 109.47477 * 300.00488 * 22 21 19 26 26 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 28 28 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 29 29 H 1.08002 * 120.00791 * 359.97438 * 4 3 2 30 30 H 1.09002 * 109.47150 * 60.27802 * 6 5 4 31 31 H 0.96692 * 114.00195 * 300.00172 * 7 6 5 32 32 H 1.07996 * 119.92818 * 179.74666 * 12 5 4 33 33 H 1.07992 * 120.00165 * 179.97438 * 13 12 5 34 34 H 1.09003 * 109.46967 * 299.99497 * 16 15 14 35 35 H 1.08999 * 109.47403 * 59.99407 * 16 15 14 36 36 H 1.09002 * 109.47598 * 89.99768 * 20 19 17 37 37 H 1.09004 * 109.47568 * 209.99410 * 20 19 17 38 38 H 1.08999 * 109.46978 * 329.99735 * 20 19 17 39 39 H 1.09006 * 109.47459 * 210.00563 * 21 19 17 40 40 H 1.09007 * 109.47131 * 330.00145 * 21 19 17 41 41 H 1.08998 * 109.47189 * 60.00052 * 23 22 21 42 42 H 1.08996 * 109.47211 * 180.02562 * 23 22 21 43 43 H 1.08998 * 109.46919 * 300.00211 * 23 22 21 44 44 H 1.08997 * 109.46877 * 60.00230 * 24 22 21 45 45 H 1.09001 * 109.46733 * 180.02562 * 24 22 21 46 46 H 1.08993 * 109.46868 * 300.00507 * 24 22 21 47 47 H 1.09005 * 109.46577 * 59.99803 * 25 22 21 48 48 H 1.08994 * 109.47324 * 179.97438 * 25 22 21 49 49 H 1.08999 * 109.46579 * 300.00029 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2936 2.3743 -0.0057 5 6 1.9230 3.6057 -0.0003 6 6 1.1023 4.8696 -0.0012 7 8 0.2783 4.9017 -1.1683 8 14 2.2371 6.3470 -0.0016 9 1 3.0943 6.3125 -1.2138 10 1 1.4284 7.5925 -0.0019 11 1 3.0935 6.3137 1.2112 12 6 3.3031 3.6798 0.0001 13 6 4.0606 2.5229 0.0000 14 6 3.4364 1.2862 0.0001 15 8 4.1799 0.1475 -0.0005 16 6 5.6007 0.3005 -0.0005 17 6 6.2523 -1.0583 -0.0006 18 8 5.5673 -2.0593 -0.0001 19 7 7.5960 -1.1614 -0.0012 20 6 8.4234 0.0476 -0.0012 21 6 8.2294 -2.4824 -0.0018 22 14 8.4973 -3.0419 -1.7584 23 6 9.6001 -1.8241 -2.6368 24 6 9.3021 -4.7222 -1.7592 25 6 6.8569 -3.1394 -2.6362 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5139 0.8900 29 1 0.2150 2.3193 -0.0105 30 1 0.4732 4.8950 0.8885 31 1 0.7723 4.8817 -1.9993 32 1 3.7909 4.6433 0.0001 33 1 5.1389 2.5835 -0.0001 34 1 5.9069 0.8506 -0.8904 35 1 5.9071 0.8499 0.8896 36 1 8.6290 0.3472 1.0265 37 1 9.3629 -0.1550 -0.5154 38 1 7.8939 0.8501 -0.5146 39 1 9.1893 -2.4254 0.5118 40 1 7.5842 -3.1950 0.5121 41 1 10.5599 -1.7671 -2.1233 42 1 9.7565 -2.1512 -3.6647 43 1 9.1289 -0.8412 -2.6363 44 1 8.6565 -5.4344 -1.2455 45 1 9.4592 -5.0492 -2.7871 46 1 10.2618 -4.6655 -1.2456 47 1 6.3857 -2.1564 -2.6357 48 1 7.0136 -3.4663 -3.6640 49 1 6.2117 -3.8519 -2.1222 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:58:33 Heat of formation + Delta-G solvation = -141.841854 kcal Electronic energy + Delta-G solvation = -28248.495301 eV Core-core repulsion = 24300.807180 eV Total energy + Delta-G solvation = -3947.688120 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 341.166 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.77666 -40.81931 -39.22369 -38.85220 -36.95231 -36.49599 -32.09640 -31.47213 -30.42013 -29.54426 -28.84006 -28.45110 -28.36827 -28.07762 -26.53533 -25.91767 -23.42497 -22.49014 -20.43258 -19.78941 -18.51563 -18.25248 -17.81917 -17.66924 -17.20473 -16.81302 -16.70665 -16.12875 -15.99937 -15.92861 -15.83791 -15.22828 -14.89848 -14.40196 -14.31981 -14.26415 -14.13765 -14.01937 -13.84268 -13.75891 -13.63901 -13.56250 -13.46515 -13.27807 -13.16766 -13.03655 -12.95624 -12.61396 -12.52990 -12.24215 -12.17799 -12.07021 -11.98244 -11.68287 -11.60968 -10.96255 -10.80983 -10.66696 -10.47286 -9.75859 -9.28005 -8.82836 0.19404 0.30871 1.11637 1.34962 1.39969 1.47293 1.47815 1.74525 1.83963 1.87531 1.92691 2.34141 2.48057 2.58899 2.59692 3.33751 3.41038 3.63900 3.70992 3.80151 3.87568 3.94348 3.98937 4.14581 4.25672 4.26210 4.31828 4.33147 4.36827 4.52372 4.54708 4.59108 4.63186 4.63550 4.67749 4.70305 4.72169 4.85550 4.91547 4.96221 5.01212 5.11106 5.31441 5.37484 5.39601 5.49177 5.57539 5.71008 5.98993 6.22772 6.51309 6.57278 7.15291 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C -0.144 4.144 5 C -0.116 4.116 6 C -0.078 4.078 7 O -0.539 6.539 8 Si 0.952 3.048 9 H -0.251 1.251 10 H -0.254 1.254 11 H -0.250 1.250 12 C -0.122 4.122 13 C -0.170 4.170 14 C 0.105 3.895 15 O -0.276 6.276 16 C 0.039 3.961 17 C 0.507 3.493 18 O -0.503 6.503 19 N -0.597 5.597 20 C 0.065 3.935 21 C -0.177 4.177 22 Si 0.997 3.003 23 C -0.446 4.446 24 C -0.448 4.448 25 C -0.440 4.440 26 H 0.103 0.897 27 H 0.057 0.943 28 H 0.056 0.944 29 H 0.143 0.857 30 H 0.118 0.882 31 H 0.377 0.623 32 H 0.125 0.875 33 H 0.138 0.862 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.062 0.938 37 H 0.083 0.917 38 H 0.073 0.927 39 H 0.085 0.915 40 H 0.094 0.906 41 H 0.069 0.931 42 H 0.071 0.929 43 H 0.068 0.932 44 H 0.071 0.929 45 H 0.071 0.929 46 H 0.069 0.931 47 H 0.063 0.937 48 H 0.064 0.936 49 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.352 3.662 -0.403 5.702 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C -0.163 4.163 5 C -0.117 4.117 6 C -0.189 4.189 7 O -0.344 6.344 8 Si 0.775 3.225 9 H -0.174 1.174 10 H -0.178 1.178 11 H -0.174 1.174 12 C -0.140 4.140 13 C -0.189 4.189 14 C 0.059 3.941 15 O -0.189 6.189 16 C -0.039 4.039 17 C 0.293 3.707 18 O -0.376 6.376 19 N -0.333 5.333 20 C -0.078 4.078 21 C -0.346 4.346 22 Si 1.193 2.807 23 C -0.554 4.554 24 C -0.556 4.556 25 C -0.548 4.548 26 H 0.121 0.879 27 H 0.076 0.924 28 H 0.075 0.925 29 H 0.160 0.840 30 H 0.136 0.864 31 H 0.224 0.776 32 H 0.143 0.857 33 H 0.155 0.845 34 H 0.110 0.890 35 H 0.110 0.890 36 H 0.080 0.920 37 H 0.102 0.898 38 H 0.091 0.909 39 H 0.104 0.896 40 H 0.112 0.888 41 H 0.088 0.912 42 H 0.090 0.910 43 H 0.087 0.913 44 H 0.090 0.910 45 H 0.090 0.910 46 H 0.088 0.912 47 H 0.082 0.918 48 H 0.083 0.917 49 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 4.059 3.458 0.090 5.333 hybrid contribution 0.224 -0.014 -0.236 0.326 sum 4.284 3.445 -0.146 5.499 Atomic orbital electron populations 1.23136 0.78107 1.04393 1.01400 1.86252 1.21342 1.25321 1.88535 1.18283 0.88986 0.85604 1.01008 1.20929 1.00471 0.90272 1.04609 1.20007 0.93531 0.95357 1.02778 1.24958 1.00443 1.01537 0.91946 1.86508 1.35635 1.96915 1.15340 0.85651 0.77943 0.77171 0.81742 1.17449 1.17844 1.17418 1.20704 0.93066 0.98030 1.02194 1.20958 1.00365 0.90744 1.06791 1.18286 0.88368 0.85770 1.01665 1.86280 1.16139 1.27684 1.88765 1.22547 0.81114 0.96648 1.03625 1.19928 0.82139 0.90517 0.78070 1.90772 1.61925 1.37827 1.47088 1.47327 1.04825 1.07109 1.74055 1.22022 0.96535 0.86647 1.02630 1.26570 1.00944 0.87278 1.19765 0.79638 0.67606 0.67361 0.66110 1.26137 1.09760 1.11194 1.08282 1.26075 1.07358 1.17452 1.04718 1.26062 1.16725 1.04675 1.07338 0.87907 0.92436 0.92527 0.83958 0.86400 0.77593 0.85695 0.84473 0.88983 0.88989 0.91959 0.89815 0.90860 0.89639 0.88768 0.91211 0.91010 0.91321 0.90984 0.90957 0.91187 0.91827 0.91688 0.90784 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.38 10.28 -34.19 -0.35 -1.73 16 3 C 0.11 0.39 6.70 -39.12 -0.26 0.12 16 4 C -0.14 -0.23 8.59 -39.46 -0.34 -0.57 16 5 C -0.12 -0.07 5.39 -104.61 -0.56 -0.63 16 6 C -0.08 0.05 2.82 36.01 0.10 0.15 16 7 O -0.54 0.01 12.76 -35.23 -0.45 -0.44 16 8 Si 0.95 -1.04 25.06 -169.99 -4.26 -5.30 16 9 H -0.25 0.27 7.11 56.52 0.40 0.67 16 10 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 11 H -0.25 0.17 7.11 56.52 0.40 0.57 16 12 C -0.12 -0.01 8.66 -39.58 -0.34 -0.36 16 13 C -0.17 -0.07 9.04 -39.46 -0.36 -0.42 16 14 C 0.11 0.33 6.70 -39.12 -0.26 0.07 16 15 O -0.28 -1.25 9.46 -47.34 -0.45 -1.70 16 16 C 0.04 0.01 3.77 36.00 0.14 0.15 16 17 C 0.51 1.25 7.30 -10.99 -0.08 1.16 16 18 O -0.50 -3.45 15.53 -14.36 -0.22 -3.67 16 19 N -0.60 0.37 2.37 -119.16 -0.28 0.08 16 20 C 0.06 -0.27 10.00 59.85 0.60 0.33 16 21 C -0.18 0.17 4.65 59.85 0.28 0.45 16 22 Si 1.00 -1.84 12.32 -169.99 -2.09 -3.93 16 23 C -0.45 1.03 7.97 101.05 0.81 1.83 16 24 C -0.45 0.55 8.65 101.05 0.87 1.42 16 25 C -0.44 -0.60 8.19 101.05 0.83 0.23 16 26 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.06 -0.04 7.65 -51.93 -0.40 -0.44 16 28 H 0.06 -0.04 7.68 -51.93 -0.40 -0.44 16 29 H 0.14 0.05 6.30 -52.49 -0.33 -0.28 16 30 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 31 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 32 H 0.13 -0.20 4.86 -52.49 -0.26 -0.45 16 33 H 0.14 -0.36 6.30 -52.49 -0.33 -0.70 16 34 H 0.09 -0.23 6.92 -51.93 -0.36 -0.59 16 35 H 0.09 -0.20 7.63 -51.93 -0.40 -0.60 16 36 H 0.06 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.08 -0.44 6.82 -51.93 -0.35 -0.79 16 38 H 0.07 -0.42 6.44 -51.93 -0.33 -0.76 16 39 H 0.09 -0.25 7.89 -51.93 -0.41 -0.66 16 40 H 0.09 0.09 7.24 -51.93 -0.38 -0.29 16 41 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 42 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 43 H 0.07 -0.17 7.46 -51.93 -0.39 -0.56 16 44 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 45 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 46 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 47 H 0.06 0.16 7.78 -51.93 -0.40 -0.24 16 48 H 0.06 0.05 7.96 -51.93 -0.41 -0.37 16 49 H 0.07 0.22 7.96 -51.93 -0.41 -0.19 16 LS Contribution 397.03 15.07 5.98 5.98 Total: 0.00 -9.82 397.03 -7.01 -16.83 By element: Atomic # 1 Polarization: -3.79 SS G_CDS: -7.29 Total: -11.08 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: 2.41 Total: 4.95 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -0.28 Total: 0.08 kcal Atomic # 8 Polarization: -6.07 SS G_CDS: -1.47 Total: -7.54 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: -6.36 Total: -9.23 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -9.82 -7.01 -16.83 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.010 kcal (2) G-P(sol) polarization free energy of solvation -9.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.831 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds