Wall clock time and date at job start Sat Mar 6 2021 15:05:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.46500 * 120.00000 * 2 1 4 4 Si 1.86295 * 109.47220 * 270.00286 * 3 2 1 5 5 C 1.86301 * 109.47405 * 60.00012 * 4 3 2 6 6 C 1.86298 * 109.47339 * 180.02562 * 4 3 2 7 7 C 1.86300 * 109.47262 * 299.99977 * 4 3 2 8 8 C 1.34777 * 119.99747 * 180.02562 * 2 1 3 9 9 O 1.21282 * 119.99517 * 180.02562 * 8 2 1 10 10 C 1.50696 * 120.00401 * 359.97438 * 8 2 1 11 11 N 1.46497 * 109.47264 * 180.02562 * 10 8 2 12 12 C 1.36838 * 125.05962 * 264.97485 * 11 10 8 13 13 C 1.34235 * 109.93800 * 180.02562 * 12 11 10 14 14 C 1.50692 * 126.50345 * 180.02562 * 13 12 11 15 15 O 1.42898 * 109.47457 * 104.96913 * 14 13 12 16 16 Si 1.86305 * 109.47067 * 344.97200 * 14 13 12 17 17 H 1.48501 * 109.47060 * 60.00119 * 16 14 13 18 18 H 1.48503 * 109.47195 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.47092 * 299.99928 * 16 14 13 20 20 C 1.46498 * 106.99657 * 359.77818 * 13 12 11 21 21 C 1.39590 * 134.02707 * 179.57964 * 20 13 12 22 22 C 1.36668 * 119.76122 * 180.37212 * 21 20 13 23 23 C 1.38785 * 120.52395 * 0.26101 * 22 21 20 24 24 C 1.37786 * 120.67117 * 359.97001 * 23 22 21 25 25 C 1.37687 * 125.06449 * 85.00068 * 11 10 8 26 26 H 1.08995 * 109.47224 * 269.99626 * 1 2 3 27 27 H 1.09003 * 109.47226 * 30.00116 * 1 2 3 28 28 H 1.09002 * 109.47438 * 149.99823 * 1 2 3 29 29 H 1.09003 * 109.47049 * 30.00218 * 3 2 1 30 30 H 1.08998 * 109.47014 * 149.99965 * 3 2 1 31 31 H 1.08993 * 109.47011 * 59.99878 * 5 4 3 32 32 H 1.08999 * 109.47088 * 180.02562 * 5 4 3 33 33 H 1.09008 * 109.46941 * 299.99691 * 5 4 3 34 34 H 1.08998 * 109.47083 * 59.99564 * 6 4 3 35 35 H 1.08997 * 109.47369 * 179.97438 * 6 4 3 36 36 H 1.09003 * 109.46862 * 299.99890 * 6 4 3 37 37 H 1.09008 * 109.47265 * 59.99590 * 7 4 3 38 38 H 1.08999 * 109.47776 * 180.02562 * 7 4 3 39 39 H 1.09002 * 109.47327 * 300.00310 * 7 4 3 40 40 H 1.09005 * 109.47029 * 59.99929 * 10 8 2 41 41 H 1.09002 * 109.46874 * 300.00441 * 10 8 2 42 42 H 1.07997 * 125.03385 * 0.04175 * 12 11 10 43 43 H 1.08998 * 109.47154 * 224.97146 * 14 13 12 44 44 H 0.96706 * 114.00656 * 180.02562 * 15 14 13 45 45 H 1.08002 * 120.12275 * 0.65785 * 21 20 13 46 46 H 1.07995 * 119.73473 * 180.27672 * 22 21 20 47 47 H 1.08005 * 119.66135 * 179.97438 * 23 22 21 48 48 H 1.08002 * 120.10859 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 14 2.5080 1.8066 -1.7564 5 6 0.8801 2.0294 -2.6346 6 6 3.4401 3.4196 -1.7564 7 6 3.5148 0.5083 -2.6347 8 6 2.1389 -1.1672 -0.0005 9 8 3.3517 -1.1672 -0.0001 10 6 1.3854 -2.4723 -0.0005 11 7 2.3374 -3.5858 -0.0005 12 6 2.7736 -4.2470 -1.1163 13 6 3.6386 -5.2124 -0.7674 14 6 4.3443 -6.1634 -1.6994 15 8 5.7114 -5.7705 -1.8353 16 14 3.5181 -6.1245 -3.3688 17 1 3.5850 -4.7481 -3.9222 18 1 4.2139 -7.0611 -4.2874 19 1 2.0973 -6.5328 -3.2276 20 6 3.7710 -5.1622 0.6907 21 6 4.5017 -5.8991 1.6244 22 6 4.3998 -5.6003 2.9541 23 6 3.5714 -4.5733 3.3844 24 6 2.8377 -3.8365 2.4803 25 6 2.9261 -4.1232 1.1222 26 1 -0.3633 -0.0001 1.0276 27 1 -0.3634 0.8900 -0.5139 28 1 -0.3634 -0.8900 -0.5139 29 1 1.6084 2.0284 0.5139 30 1 3.1499 1.1384 0.5138 31 1 0.2911 2.7890 -2.1208 32 1 1.0618 2.3437 -3.6624 33 1 0.3351 1.0854 -2.6347 34 1 4.3925 3.2888 -1.2427 35 1 3.6222 3.7340 -2.7841 36 1 2.8514 4.1794 -1.2424 37 1 2.9698 -0.4358 -2.6347 38 1 3.6968 0.8231 -3.6623 39 1 4.4672 0.3779 -2.1209 40 1 0.7584 -2.5298 -0.8903 41 1 0.7591 -2.5302 0.8897 42 1 2.4676 -4.0249 -2.1279 43 1 4.2952 -7.1736 -1.2931 44 1 6.2277 -6.3393 -2.4228 45 1 5.1487 -6.6994 1.2968 46 1 4.9687 -6.1677 3.6757 47 1 3.5011 -4.3494 4.4386 48 1 2.1961 -3.0391 2.8251 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11678528_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:05:58 Heat of formation + Delta-G solvation = -32.357365 kcal Electronic energy + Delta-G solvation = -27526.306860 eV Core-core repulsion = 23898.852535 eV Total energy + Delta-G solvation = -3627.454325 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 334.163 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.40729 -40.66823 -37.90571 -37.51480 -36.56363 -34.09244 -31.45994 -30.13345 -29.85370 -29.41916 -28.81791 -28.41431 -28.14430 -26.73695 -25.16898 -23.51408 -22.39333 -20.61072 -20.26086 -18.44518 -18.25696 -18.02366 -17.65443 -16.92869 -16.69884 -16.26563 -15.84112 -15.38136 -15.10448 -14.79213 -14.61810 -14.44593 -14.33948 -14.30407 -14.26026 -14.13064 -14.03740 -13.88305 -13.69236 -13.49131 -13.38464 -13.31383 -13.17564 -13.07354 -12.97429 -12.60733 -12.36186 -12.32873 -12.10499 -11.88013 -11.73753 -11.52707 -11.04294 -10.88370 -10.80265 -10.33399 -10.09486 -9.31592 -8.94497 -8.44879 0.34495 0.86370 1.23856 1.34411 1.41144 1.48747 1.55534 1.69730 1.76382 1.81040 1.83158 1.96911 2.17580 2.55136 3.14234 3.33780 3.51336 3.73838 3.79045 3.85880 3.92856 3.93614 4.14806 4.21394 4.28733 4.37867 4.41917 4.48749 4.51186 4.58742 4.59514 4.67194 4.68983 4.76792 4.80308 4.85406 4.85877 4.92143 4.97376 5.05595 5.28060 5.32320 5.35464 5.46144 5.64958 5.71394 5.87489 5.93088 5.96752 6.13200 6.34621 6.43509 6.80742 7.08246 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.597 5.597 3 C -0.178 4.178 4 Si 0.997 3.003 5 C -0.446 4.446 6 C -0.448 4.448 7 C -0.439 4.439 8 C 0.482 3.518 9 O -0.504 6.504 10 C 0.092 3.908 11 N -0.465 5.465 12 C 0.065 3.935 13 C -0.155 4.155 14 C -0.042 4.042 15 O -0.544 6.544 16 Si 0.938 3.062 17 H -0.249 1.249 18 H -0.253 1.253 19 H -0.249 1.249 20 C -0.083 4.083 21 C -0.065 4.065 22 C -0.146 4.146 23 C -0.098 4.098 24 C -0.127 4.127 25 C 0.110 3.890 26 H 0.062 0.938 27 H 0.083 0.917 28 H 0.073 0.927 29 H 0.084 0.916 30 H 0.092 0.908 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.067 0.933 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.069 0.931 37 H 0.060 0.940 38 H 0.064 0.936 39 H 0.073 0.927 40 H 0.120 0.880 41 H 0.117 0.883 42 H 0.165 0.835 43 H 0.071 0.929 44 H 0.375 0.625 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.124 0.876 48 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.904 1.043 -1.119 6.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.333 5.333 3 C -0.347 4.347 4 Si 1.192 2.808 5 C -0.553 4.553 6 C -0.556 4.556 7 C -0.547 4.547 8 C 0.267 3.733 9 O -0.378 6.378 10 C -0.034 4.034 11 N -0.149 5.149 12 C -0.059 4.059 13 C -0.162 4.162 14 C -0.153 4.153 15 O -0.349 6.349 16 Si 0.760 3.240 17 H -0.173 1.173 18 H -0.176 1.176 19 H -0.172 1.172 20 C -0.088 4.088 21 C -0.083 4.083 22 C -0.165 4.165 23 C -0.117 4.117 24 C -0.147 4.147 25 C 0.005 3.995 26 H 0.080 0.920 27 H 0.101 0.899 28 H 0.092 0.908 29 H 0.103 0.897 30 H 0.111 0.889 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.087 0.913 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.088 0.912 37 H 0.080 0.920 38 H 0.083 0.917 39 H 0.092 0.908 40 H 0.138 0.862 41 H 0.134 0.866 42 H 0.182 0.818 43 H 0.089 0.911 44 H 0.221 0.779 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.142 0.858 48 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -6.082 1.779 -1.507 6.514 hybrid contribution 0.217 -0.181 0.120 0.307 sum -5.865 1.598 -1.387 6.235 Atomic orbital electron populations 1.22012 0.79187 1.03974 1.02626 1.47466 1.06796 1.05355 1.73640 1.26549 1.00871 0.87603 1.19644 0.79642 0.67656 0.67322 0.66150 1.26133 1.16493 1.04415 1.08286 1.26077 1.08681 1.16141 1.04735 1.26057 1.09675 1.11527 1.07397 1.20911 0.88788 0.85369 0.78227 1.90803 1.13135 1.86500 1.47393 1.21647 0.91114 0.84108 1.06489 1.43183 1.38836 1.27835 1.05009 1.21450 0.99470 0.94143 0.90883 1.19432 1.02949 1.01771 0.92045 1.23945 0.86844 0.97944 1.06587 1.86595 1.20422 1.56992 1.70868 0.85934 0.80363 0.81550 0.76147 1.17276 1.17636 1.17233 1.18910 0.99620 0.97842 0.92389 1.20273 0.97531 0.98555 0.91958 1.20650 1.00990 0.99314 0.95574 1.20803 0.96378 0.95593 0.98911 1.19940 1.03455 1.02025 0.89313 1.18146 0.97181 0.95987 0.88148 0.91980 0.89869 0.90820 0.89745 0.88910 0.91186 0.91005 0.91349 0.91001 0.90944 0.91165 0.92049 0.91664 0.90816 0.86218 0.86550 0.81813 0.91075 0.77854 0.85989 0.85966 0.85795 0.86821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.30 10.00 59.85 0.60 0.30 16 2 N -0.60 0.70 2.38 -119.16 -0.28 0.42 16 3 C -0.18 0.19 4.65 59.85 0.28 0.47 16 4 Si 1.00 -1.90 12.32 -169.99 -2.09 -3.99 16 5 C -0.45 1.09 7.97 101.05 0.80 1.90 16 6 C -0.45 0.49 8.65 101.05 0.87 1.37 16 7 C -0.44 -0.54 8.18 101.05 0.83 0.29 16 8 C 0.48 0.71 7.29 -10.99 -0.08 0.63 16 9 O -0.50 -3.06 15.45 5.56 0.09 -2.97 16 10 C 0.09 -0.07 5.03 -5.20 -0.03 -0.10 16 11 N -0.47 -1.34 2.27 -115.71 -0.26 -1.60 16 12 C 0.07 0.20 9.89 -16.73 -0.17 0.03 16 13 C -0.15 -0.64 5.61 -102.71 -0.58 -1.22 16 14 C -0.04 -0.07 3.05 36.00 0.11 0.04 16 15 O -0.54 -1.45 12.86 -35.23 -0.45 -1.90 16 16 Si 0.94 0.29 26.08 -169.99 -4.43 -4.15 16 17 H -0.25 -0.36 7.03 56.52 0.40 0.04 16 18 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 19 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 20 C -0.08 -0.44 6.35 -105.13 -0.67 -1.11 16 21 C -0.06 -0.27 10.05 -39.64 -0.40 -0.67 16 22 C -0.15 -0.46 9.97 -39.95 -0.40 -0.85 16 23 C -0.10 -0.28 10.01 -39.54 -0.40 -0.68 16 24 C -0.13 -0.44 10.00 -39.43 -0.39 -0.84 16 25 C 0.11 0.51 6.80 -83.99 -0.57 -0.06 16 26 H 0.06 -0.32 8.14 -51.93 -0.42 -0.74 16 27 H 0.08 -0.46 6.82 -51.93 -0.35 -0.81 16 28 H 0.07 -0.47 6.44 -51.93 -0.33 -0.80 16 29 H 0.08 -0.24 7.89 -51.93 -0.41 -0.65 16 30 H 0.09 0.10 7.24 -51.93 -0.38 -0.27 16 31 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 33 H 0.07 -0.19 7.46 -51.92 -0.39 -0.58 16 34 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 35 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 36 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.06 0.13 7.78 -51.92 -0.40 -0.28 16 38 H 0.06 0.04 7.96 -51.93 -0.41 -0.37 16 39 H 0.07 0.23 7.96 -51.93 -0.41 -0.18 16 40 H 0.12 -0.49 7.38 -51.93 -0.38 -0.87 16 41 H 0.12 -0.35 8.11 -51.93 -0.42 -0.77 16 42 H 0.16 0.07 6.29 -52.49 -0.33 -0.26 16 43 H 0.07 0.01 7.96 -51.93 -0.41 -0.41 16 44 H 0.37 -0.82 8.74 45.56 0.40 -0.42 16 45 H 0.12 0.33 8.06 -52.49 -0.42 -0.09 16 46 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 47 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 48 H 0.11 0.19 8.06 -52.49 -0.42 -0.24 16 LS Contribution 394.35 15.07 5.94 5.94 Total: 0.00 -10.22 394.35 -8.90 -19.12 By element: Atomic # 1 Polarization: -3.15 SS G_CDS: -7.22 Total: -10.37 kcal Atomic # 6 Polarization: -0.32 SS G_CDS: -0.18 Total: -0.50 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.55 Total: -1.18 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -0.37 Total: -4.87 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -6.53 Total: -8.14 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -10.22 -8.90 -19.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11678528_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.238 kcal (2) G-P(sol) polarization free energy of solvation -10.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.454 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.119 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.357 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds