Wall clock time and date at job start Sat Mar 6 2021 16:05:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00900 * 109.47602 * 2 1 4 4 C 1.46899 * 109.46882 * 120.00266 * 2 1 3 5 5 C 1.46904 * 109.46931 * 239.99830 * 2 1 3 6 6 H 1.08997 * 112.91255 * 288.75224 * 5 2 1 7 7 C 1.53781 * 113.61321 * 60.00409 * 5 2 1 8 8 C 1.53786 * 87.17350 * 139.93872 * 7 5 2 9 9 H 1.08993 * 113.61491 * 89.15923 * 8 7 5 10 10 C 1.52999 * 113.61361 * 220.06273 * 8 7 5 11 11 N 1.46494 * 109.47391 * 184.99937 * 10 8 7 12 12 C 1.34772 * 120.00463 * 180.02562 * 11 10 8 13 13 O 1.21281 * 119.99889 * 359.97438 * 12 11 10 14 14 C 1.50699 * 120.00326 * 180.02562 * 12 11 10 15 15 C 1.52999 * 109.47255 * 179.97438 * 14 12 11 16 16 O 1.42904 * 109.47219 * 179.97438 * 15 14 12 17 17 C 1.35901 * 117.00377 * 179.97438 * 16 15 14 18 18 C 1.38704 * 120.05849 * 179.72555 * 17 16 15 19 19 C 1.38167 * 119.94218 * 179.72225 * 18 17 16 20 20 C 1.50707 * 119.97075 * 180.27870 * 19 18 17 21 21 O 1.42906 * 109.46792 * 300.29759 * 20 19 18 22 22 Si 1.86303 * 109.46917 * 180.29903 * 20 19 18 23 23 C 1.38241 * 120.05779 * 0.57369 * 19 18 17 24 24 C 1.38286 * 120.10770 * 359.68059 * 23 19 18 25 25 C 1.38122 * 120.05825 * 0.04390 * 24 23 19 26 26 C 1.53782 * 113.61210 * 157.50140 * 5 2 1 27 27 H 1.09000 * 109.47053 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46820 * 299.99778 * 1 2 3 29 29 H 1.09003 * 109.46691 * 59.99989 * 1 2 3 30 30 H 1.09009 * 109.47136 * 179.97438 * 4 2 1 31 31 H 1.09001 * 109.47357 * 299.99627 * 4 2 1 32 32 H 1.09000 * 109.47431 * 60.00043 * 4 2 1 33 33 H 1.09002 * 113.61445 * 254.52871 * 7 5 2 34 34 H 1.09002 * 113.61408 * 25.34602 * 7 5 2 35 35 H 1.09002 * 109.47053 * 305.00261 * 10 8 7 36 36 H 1.09004 * 109.47121 * 64.99898 * 10 8 7 37 37 H 0.97000 * 119.99680 * 359.97438 * 11 10 8 38 38 H 1.09000 * 109.46571 * 299.99706 * 14 12 11 39 39 H 1.08996 * 109.47470 * 59.99592 * 14 12 11 40 40 H 1.09000 * 109.47256 * 299.99488 * 15 14 12 41 41 H 1.09004 * 109.47121 * 59.99874 * 15 14 12 42 42 H 1.08007 * 120.02836 * 0.02562 * 18 17 16 43 43 H 1.08996 * 109.47249 * 60.29581 * 20 19 18 44 44 H 0.96693 * 113.99749 * 299.99790 * 21 20 19 45 45 H 1.48496 * 109.99569 * 179.97438 * 22 20 19 46 46 H 1.48500 * 110.00030 * 301.31563 * 22 20 19 47 47 H 1.07997 * 119.94538 * 179.70316 * 23 19 18 48 48 H 1.08007 * 119.97360 * 180.02562 * 24 23 19 49 49 H 1.08004 * 120.02561 * 179.97438 * 25 24 23 50 50 H 1.08997 * 113.61668 * 334.56534 * 26 5 2 51 51 H 1.08998 * 113.61674 * 105.39043 * 26 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9586 -0.6926 -1.1995 6 1 1.7958 -1.7697 -1.1637 7 6 1.4998 -0.0435 -2.5159 8 6 2.9106 -0.3266 -3.0586 9 1 3.0084 -1.3035 -3.5321 10 6 3.4778 0.8088 -3.9130 11 7 4.7655 0.3983 -4.4782 12 6 5.4543 1.2440 -5.2698 13 8 5.0078 2.3447 -5.5148 14 6 6.7787 0.8215 -5.8516 15 6 7.3460 1.9570 -6.7060 16 8 8.6021 1.5566 -7.2572 17 6 9.2441 2.4565 -8.0476 18 6 10.4704 2.1361 -8.6110 19 6 11.1183 3.0507 -9.4189 20 6 12.4478 2.7008 -10.0364 21 8 13.3923 2.4145 -9.0030 22 14 13.0571 4.1375 -11.0541 23 6 10.5510 4.2888 -9.6563 24 6 9.3310 4.6126 -9.0916 25 6 8.6766 3.6997 -8.2878 26 6 3.3913 -0.2990 -1.5962 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 3.0487 -0.6930 1.1992 31 1 1.5953 -0.1787 2.0894 32 1 1.5953 -1.7202 1.1994 33 1 0.7152 -0.6012 -3.0274 34 1 1.2725 1.0185 -2.4232 35 1 2.7828 1.0376 -4.7210 36 1 3.6187 1.6944 -3.2933 37 1 5.1228 -0.4819 -4.2819 38 1 7.4737 0.5920 -5.0439 39 1 6.6374 -0.0636 -6.4718 40 1 6.6509 2.1861 -7.5137 41 1 7.4873 2.8424 -6.0861 42 1 10.9162 1.1705 -8.4222 43 1 12.3324 1.8257 -10.6758 44 1 13.5451 3.1506 -8.3948 45 1 14.3678 3.8052 -11.6679 46 1 12.0685 4.4656 -12.1125 47 1 11.0613 5.0041 -10.2842 48 1 8.8896 5.5804 -9.2789 49 1 7.7239 3.9533 -7.8466 50 1 3.6826 0.6934 -1.2525 51 1 4.1340 -1.0623 -1.3640 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11760412_4549614.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:52 Heat of formation + Delta-G solvation = 47.769354 kcal Electronic energy + Delta-G solvation = -27919.730248 eV Core-core repulsion = 23905.232553 eV Total energy + Delta-G solvation = -4014.497695 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.201 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.59673 -41.43069 -40.79215 -39.18438 -38.43651 -37.29846 -35.45001 -33.41152 -32.49210 -31.00387 -29.64894 -29.43480 -27.11121 -26.68657 -26.47249 -25.17544 -23.71930 -23.57304 -22.14151 -21.75251 -21.02042 -19.39678 -18.54146 -18.38618 -17.88941 -17.74418 -17.57053 -17.15672 -17.13284 -16.91111 -16.84158 -16.48196 -16.24255 -16.02724 -15.42282 -14.96133 -14.84545 -14.67715 -14.42874 -14.23983 -13.96249 -13.90791 -13.84445 -13.65268 -13.52024 -13.25965 -13.25203 -13.14716 -12.96957 -12.89893 -12.81059 -12.41169 -12.19014 -12.04152 -11.90542 -11.86068 -11.66398 -11.56281 -11.11207 -10.54308 -10.20343 -9.96242 -9.31403 -5.01938 0.15864 0.35071 0.98384 1.26961 1.46559 1.61459 1.68188 1.95141 2.42615 2.59593 2.62993 2.88942 2.96909 3.38535 3.45114 3.47409 3.54557 3.57925 3.62431 3.68881 3.81411 3.84294 3.95478 4.05383 4.08490 4.19546 4.20152 4.23834 4.25144 4.30983 4.34881 4.37601 4.43191 4.47005 4.53405 4.58152 4.62096 4.68243 4.72368 4.74404 4.77337 4.82247 4.84606 4.88971 4.94064 4.98559 5.20576 5.21672 5.34032 5.38369 5.40807 5.65669 6.28691 6.39017 6.72958 7.10526 Molecular weight = 336.20amu Principal moments of inertia in cm(-1) A = 0.036965 B = 0.001490 C = 0.001463 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 757.296333 B =18789.953465 C =19130.910583 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.367 5.367 3 H 0.435 0.565 4 C -0.047 4.047 5 C 0.022 3.978 6 H 0.172 0.828 7 C -0.139 4.139 8 C -0.121 4.121 9 H 0.116 0.884 10 C 0.122 3.878 11 N -0.715 5.715 12 C 0.520 3.480 13 O -0.584 6.584 14 C -0.136 4.136 15 C 0.070 3.930 16 O -0.325 6.325 17 C 0.118 3.882 18 C -0.141 4.141 19 C -0.084 4.084 20 C -0.075 4.075 21 O -0.554 6.554 22 Si 0.780 3.220 23 C -0.159 4.159 24 C -0.076 4.076 25 C -0.209 4.209 26 C -0.142 4.142 27 H 0.121 0.879 28 H 0.128 0.872 29 H 0.119 0.881 30 H 0.122 0.878 31 H 0.126 0.874 32 H 0.121 0.879 33 H 0.101 0.899 34 H 0.114 0.886 35 H 0.053 0.947 36 H 0.070 0.930 37 H 0.420 0.580 38 H 0.128 0.872 39 H 0.122 0.878 40 H 0.061 0.939 41 H 0.067 0.933 42 H 0.127 0.873 43 H 0.107 0.893 44 H 0.396 0.604 45 H -0.302 1.302 46 H -0.285 1.285 47 H 0.145 0.855 48 H 0.152 0.848 49 H 0.140 0.860 50 H 0.112 0.888 51 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -27.809 -9.683 31.835 43.365 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 N 0.056 4.944 3 H 0.272 0.728 4 C -0.189 4.189 5 C -0.080 4.080 6 H 0.189 0.811 7 C -0.177 4.177 8 C -0.140 4.140 9 H 0.134 0.866 10 C -0.001 4.001 11 N -0.368 5.368 12 C 0.307 3.693 13 O -0.465 6.465 14 C -0.176 4.176 15 C -0.005 4.005 16 O -0.239 6.239 17 C 0.073 3.927 18 C -0.160 4.160 19 C -0.085 4.085 20 C -0.184 4.184 21 O -0.362 6.362 22 Si 0.686 3.314 23 C -0.176 4.176 24 C -0.094 4.094 25 C -0.228 4.228 26 C -0.179 4.179 27 H 0.140 0.860 28 H 0.146 0.854 29 H 0.138 0.862 30 H 0.140 0.860 31 H 0.145 0.855 32 H 0.140 0.860 33 H 0.119 0.881 34 H 0.132 0.868 35 H 0.071 0.929 36 H 0.089 0.911 37 H 0.257 0.743 38 H 0.146 0.854 39 H 0.140 0.860 40 H 0.079 0.921 41 H 0.085 0.915 42 H 0.145 0.855 43 H 0.125 0.875 44 H 0.246 0.754 45 H -0.230 1.230 46 H -0.212 1.212 47 H 0.162 0.838 48 H 0.170 0.830 49 H 0.158 0.842 50 H 0.130 0.870 51 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -27.953 -9.666 30.684 42.618 hybrid contribution -0.108 -0.485 -0.382 0.627 sum -28.061 -10.152 30.302 42.528 Atomic orbital electron populations 1.24106 0.75860 1.09651 1.09494 1.45044 1.16016 1.18970 1.14409 0.72827 1.24106 1.05663 1.02490 0.86599 1.24917 0.97702 1.02160 0.83237 0.81058 1.23506 0.97326 1.03652 0.93242 1.22627 0.96899 0.99394 0.95113 0.86621 1.21475 0.83632 0.97867 0.97120 1.45814 1.22083 1.19154 1.49749 1.20475 0.86245 0.84334 0.78262 1.90766 1.71101 1.23381 1.61223 1.21459 0.94566 0.99731 1.01801 1.22494 0.82572 0.98291 0.97163 1.85955 1.35037 1.41050 1.61834 1.19078 0.92478 0.89084 0.92031 1.20299 0.93668 1.01295 1.00705 1.20219 0.96794 0.94088 0.97374 1.25212 0.87304 1.10037 0.95880 1.86471 1.61087 1.44751 1.43932 0.93611 0.76023 0.81841 0.79876 1.21180 0.97403 0.96262 1.02796 1.21254 0.94021 0.99868 0.94225 1.21535 1.02721 0.94006 1.04494 1.23684 0.94773 1.05201 0.94261 0.86022 0.85404 0.86219 0.85998 0.85538 0.86033 0.88051 0.86817 0.92890 0.91137 0.74280 0.85416 0.86009 0.92082 0.91507 0.85460 0.87540 0.75413 1.22990 1.21237 0.83792 0.83003 0.84239 0.87016 0.87757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.09 8.99 127.69 1.15 4.24 16 2 N -0.37 23.95 0.62 -920.13 -0.57 23.38 16 3 H 0.43 -29.56 8.19 -89.69 -0.73 -30.30 16 4 C -0.05 2.96 9.15 127.69 1.17 4.13 16 5 C 0.02 -1.35 2.92 45.44 0.13 -1.22 16 6 H 0.17 -10.62 8.11 -2.39 -0.02 -10.64 16 7 C -0.14 7.46 6.14 31.12 0.19 7.65 16 8 C -0.12 5.78 3.76 -10.20 -0.04 5.74 16 9 H 0.12 -5.43 8.14 -2.39 -0.02 -5.45 16 10 C 0.12 -4.46 5.51 86.38 0.48 -3.98 16 11 N -0.72 23.13 5.56 -463.07 -2.57 20.55 16 12 C 0.52 -11.66 7.83 87.66 0.69 -10.97 16 13 O -0.58 7.27 15.98 -3.03 -0.05 7.22 16 14 C -0.14 3.19 6.07 29.85 0.18 3.37 16 15 C 0.07 -1.09 4.03 71.98 0.29 -0.80 16 16 O -0.32 3.39 10.14 -92.43 -0.94 2.45 16 17 C 0.12 -0.97 6.69 22.50 0.15 -0.82 16 18 C -0.14 1.02 9.55 22.36 0.21 1.24 16 19 C -0.08 0.76 5.39 -19.88 -0.11 0.66 16 20 C -0.07 0.71 2.82 71.24 0.20 0.91 16 21 O -0.55 4.93 12.76 -148.98 -1.90 3.03 16 22 Si 0.78 -8.59 29.79 68.60 2.04 -6.55 16 23 C -0.16 1.78 8.67 22.28 0.19 1.97 16 24 C -0.08 0.90 10.04 22.25 0.22 1.12 16 25 C -0.21 2.16 9.04 22.37 0.20 2.37 16 26 C -0.14 7.72 7.12 31.18 0.22 7.95 16 27 H 0.12 -7.53 8.14 -2.39 -0.02 -7.55 16 28 H 0.13 -8.01 8.14 -2.39 -0.02 -8.03 16 29 H 0.12 -7.36 7.13 -2.39 -0.02 -7.38 16 30 H 0.12 -7.62 8.00 -2.38 -0.02 -7.64 16 31 H 0.13 -7.97 8.14 -2.39 -0.02 -7.99 16 32 H 0.12 -7.61 8.13 -2.39 -0.02 -7.63 16 33 H 0.10 -5.22 8.14 -2.39 -0.02 -5.24 16 34 H 0.11 -6.20 8.00 -2.39 -0.02 -6.22 16 35 H 0.05 -1.63 8.14 -2.39 -0.02 -1.64 16 36 H 0.07 -2.51 7.85 -2.38 -0.02 -2.53 16 37 H 0.42 -16.13 8.47 -92.71 -0.79 -16.91 16 38 H 0.13 -3.50 8.14 -2.39 -0.02 -3.52 16 39 H 0.12 -3.17 8.14 -2.39 -0.02 -3.19 16 40 H 0.06 -0.82 7.62 -2.39 -0.02 -0.84 16 41 H 0.07 -0.98 7.62 -2.38 -0.02 -1.00 16 42 H 0.13 -0.86 8.06 -2.91 -0.02 -0.88 16 43 H 0.11 -0.87 7.96 -2.39 -0.02 -0.89 16 44 H 0.40 -6.77 8.70 -74.06 -0.64 -7.41 16 45 H -0.30 0.89 7.11 99.48 0.71 1.60 16 46 H -0.29 1.83 7.11 99.48 0.71 2.54 16 47 H 0.14 -2.15 4.87 -2.91 -0.01 -2.17 16 48 H 0.15 -2.51 8.06 -2.91 -0.02 -2.54 16 49 H 0.14 -1.80 6.30 -2.91 -0.02 -1.82 16 50 H 0.11 -6.16 7.70 -2.39 -0.02 -6.17 16 51 H 0.10 -5.56 8.14 -2.39 -0.02 -5.58 16 Total: 1.00 -83.77 406.83 0.36 -83.41 By element: Atomic # 1 Polarization: -155.85 SS G_CDS: -1.19 Total: -157.04 kcal Atomic # 6 Polarization: 18.02 SS G_CDS: 5.53 Total: 23.55 kcal Atomic # 7 Polarization: 47.07 SS G_CDS: -3.14 Total: 43.93 kcal Atomic # 8 Polarization: 15.58 SS G_CDS: -2.89 Total: 12.70 kcal Atomic # 14 Polarization: -8.59 SS G_CDS: 2.04 Total: -6.55 kcal Total: -83.77 0.36 -83.41 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11760412_4549614.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.182 kcal (2) G-P(sol) polarization free energy of solvation -83.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -83.412 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds