Wall clock time and date at job start Sat Mar 6 2021 16:05:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00902 * 109.47123 * 2 1 4 4 C 1.46902 * 109.46784 * 119.99278 * 2 1 3 5 5 C 1.46896 * 109.47363 * 239.99405 * 2 1 3 6 6 H 1.08997 * 112.85218 * 288.80585 * 5 2 1 7 7 C 1.53777 * 113.61340 * 60.00092 * 5 2 1 8 8 C 1.53785 * 87.08229 * 139.97936 * 7 5 2 9 9 H 1.09000 * 113.61160 * 89.11963 * 8 7 5 10 10 C 1.53001 * 113.61509 * 220.01691 * 8 7 5 11 11 N 1.46496 * 109.46928 * 184.99976 * 10 8 7 12 12 C 1.34782 * 120.00004 * 180.02562 * 11 10 8 13 13 O 1.21282 * 119.99769 * 359.97438 * 12 11 10 14 14 C 1.50701 * 119.99990 * 180.02562 * 12 11 10 15 15 C 1.53001 * 109.46915 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.46991 * 179.97438 * 15 14 12 17 17 O 1.42897 * 109.47299 * 180.02562 * 16 15 14 18 18 C 1.35899 * 117.00470 * 180.02562 * 17 16 15 19 19 C 1.38705 * 120.05807 * 180.02562 * 18 17 16 20 20 C 1.38173 * 119.94529 * 180.02562 * 19 18 17 21 21 C 1.50692 * 119.97273 * 180.02562 * 20 19 18 22 22 O 1.42905 * 109.47060 * 65.00377 * 21 20 19 23 23 Si 1.86303 * 109.47027 * 184.99946 * 21 20 19 24 24 C 1.38245 * 120.05239 * 359.97438 * 20 19 18 25 25 C 1.38285 * 120.11447 * 0.02562 * 24 20 19 26 26 C 1.38123 * 120.05611 * 359.68297 * 25 24 20 27 27 C 1.53777 * 113.61398 * 157.49700 * 5 2 1 28 28 H 1.09002 * 109.47401 * 300.00403 * 1 2 3 29 29 H 1.09001 * 109.46874 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.46970 * 60.00549 * 1 2 3 31 31 H 1.08992 * 109.47412 * 300.00320 * 4 2 1 32 32 H 1.09001 * 109.47165 * 60.00484 * 4 2 1 33 33 H 1.09004 * 109.46739 * 179.97438 * 4 2 1 34 34 H 1.09003 * 113.61636 * 254.52757 * 7 5 2 35 35 H 1.09006 * 113.61905 * 25.35071 * 7 5 2 36 36 H 1.08995 * 109.47368 * 305.00297 * 10 8 7 37 37 H 1.08997 * 109.46797 * 65.00186 * 10 8 7 38 38 H 0.97000 * 119.99904 * 0.02562 * 11 10 8 39 39 H 1.08995 * 109.47341 * 299.99973 * 14 12 11 40 40 H 1.09002 * 109.46972 * 59.99755 * 14 12 11 41 41 H 1.08995 * 109.47368 * 300.00292 * 15 14 12 42 42 H 1.08997 * 109.46797 * 60.00180 * 15 14 12 43 43 H 1.09004 * 109.47549 * 300.00389 * 16 15 14 44 44 H 1.09002 * 109.46854 * 60.00116 * 16 15 14 45 45 H 1.07992 * 120.02934 * 359.97438 * 19 18 17 46 46 H 1.08999 * 109.47273 * 305.00390 * 21 20 19 47 47 H 0.96693 * 113.99961 * 59.99492 * 22 21 20 48 48 H 1.48500 * 109.99867 * 180.02562 * 23 21 20 49 49 H 1.48494 * 109.99959 * 301.31826 * 23 21 20 50 50 H 1.08001 * 119.94111 * 180.02562 * 24 20 19 51 51 H 1.08000 * 119.97658 * 179.97438 * 25 24 20 52 52 H 1.08001 * 120.03345 * 180.31705 * 26 25 24 53 53 H 1.09001 * 113.61446 * 334.57072 * 27 5 2 54 54 H 1.09004 * 113.61648 * 105.47005 * 27 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1996 5 6 1.9587 -0.6926 -1.1993 6 1 1.7946 -1.7695 -1.1629 7 6 1.4999 -0.0438 -2.5158 8 6 2.9110 -0.3287 -3.0567 9 1 3.0085 -1.3064 -3.5286 10 6 3.4800 0.8049 -3.9123 11 7 4.7680 0.3925 -4.4754 12 6 5.4583 1.2364 -5.2677 13 8 5.0130 2.3371 -5.5148 14 6 6.7830 0.8119 -5.8475 15 6 7.3520 1.9456 -6.7030 16 6 8.6972 1.5149 -7.2911 17 8 9.2290 2.5739 -8.0896 18 6 10.4282 2.3521 -8.6893 19 6 11.0031 3.3374 -9.4784 20 6 12.2222 3.1093 -10.0874 21 6 12.8476 4.1794 -10.9444 22 8 13.1753 5.3088 -10.1325 23 14 14.3968 3.5139 -11.7368 24 6 12.8691 1.9004 -9.9103 25 6 12.2981 0.9166 -9.1241 26 6 11.0824 1.1419 -8.5082 27 6 3.3913 -0.2990 -1.5961 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8901 31 1 1.5952 -0.1785 2.0894 32 1 1.5953 -1.7201 1.1996 33 1 3.0486 -0.6928 1.1993 34 1 0.7154 -0.6015 -3.0273 35 1 1.2726 1.0183 -2.4233 36 1 2.7861 1.0331 -4.7212 37 1 3.6210 1.6912 -3.2937 38 1 5.1239 -0.4880 -4.2780 39 1 7.4769 0.5830 -5.0388 40 1 6.6415 -0.0741 -6.4664 41 1 6.6579 2.1741 -7.5117 42 1 7.4934 2.8317 -6.0843 43 1 9.3911 1.2866 -6.4820 44 1 8.5561 0.6285 -7.9096 45 1 10.4979 4.2817 -9.6174 46 1 12.1436 4.4814 -11.7199 47 1 13.7988 5.1132 -9.4199 48 1 15.0234 4.5601 -12.5843 49 1 15.3518 3.0693 -10.6903 50 1 13.8221 1.7242 -10.3869 51 1 12.8052 -0.0271 -8.9876 52 1 10.6393 0.3751 -7.8901 53 1 3.6825 0.6935 -1.2523 54 1 4.1339 -1.0628 -1.3650 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11760412_4549616.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:05:55 Heat of formation + Delta-G solvation = 41.461222 kcal Electronic energy + Delta-G solvation = -29448.512367 eV Core-core repulsion = 25278.203511 eV Total energy + Delta-G solvation = -4170.308855 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.216 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.60174 -41.32047 -40.80400 -39.25731 -38.46274 -37.44655 -35.40920 -34.92831 -32.50321 -31.33348 -29.93316 -29.64960 -28.02280 -26.90248 -26.60172 -26.26106 -24.01587 -23.70746 -23.13685 -21.91393 -21.73262 -20.98677 -19.27348 -18.54228 -18.42132 -17.95410 -17.73302 -17.51876 -17.23023 -17.15090 -17.00282 -16.79096 -16.58862 -16.26540 -16.17230 -15.54919 -15.13925 -15.02812 -14.75448 -14.32497 -14.24601 -14.13970 -13.92181 -13.84495 -13.67518 -13.53461 -13.35037 -13.30290 -13.22167 -13.14887 -13.11602 -12.84216 -12.76762 -12.34728 -12.31511 -12.18266 -11.94572 -11.89701 -11.63916 -11.57178 -11.55830 -10.99783 -10.69341 -10.15671 -9.95973 -9.26828 -4.94086 0.19426 0.39005 0.98221 1.26453 1.57399 1.57583 1.88856 1.97470 2.35275 2.58459 2.65403 2.88954 2.96720 3.37661 3.38842 3.44867 3.56863 3.61765 3.66935 3.69611 3.82959 3.85014 3.95158 4.06617 4.09409 4.19231 4.20117 4.23481 4.25048 4.30716 4.32501 4.37413 4.39109 4.41162 4.44546 4.52601 4.53153 4.62236 4.66682 4.68342 4.73982 4.78698 4.81907 4.84277 4.89045 4.96841 4.97519 4.98967 5.12743 5.22710 5.26295 5.36758 5.43817 5.44357 5.72334 6.41115 6.43225 6.48190 7.21845 Molecular weight = 350.22amu Principal moments of inertia in cm(-1) A = 0.035430 B = 0.001234 C = 0.001222 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 790.091711 B =22679.909960 C =22903.806080 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.368 5.368 3 H 0.434 0.566 4 C -0.047 4.047 5 C 0.023 3.977 6 H 0.174 0.826 7 C -0.141 4.141 8 C -0.119 4.119 9 H 0.118 0.882 10 C 0.122 3.878 11 N -0.718 5.718 12 C 0.507 3.493 13 O -0.592 6.592 14 C -0.130 4.130 15 C -0.103 4.103 16 C 0.055 3.945 17 O -0.339 6.339 18 C 0.117 3.883 19 C -0.152 4.152 20 C -0.082 4.082 21 C -0.090 4.090 22 O -0.550 6.550 23 Si 0.778 3.222 24 C -0.163 4.163 25 C -0.073 4.073 26 C -0.203 4.203 27 C -0.141 4.141 28 H 0.127 0.873 29 H 0.122 0.878 30 H 0.118 0.882 31 H 0.126 0.874 32 H 0.122 0.878 33 H 0.122 0.878 34 H 0.101 0.899 35 H 0.111 0.889 36 H 0.048 0.952 37 H 0.065 0.935 38 H 0.420 0.580 39 H 0.129 0.871 40 H 0.126 0.874 41 H 0.057 0.943 42 H 0.058 0.942 43 H 0.083 0.917 44 H 0.083 0.917 45 H 0.116 0.884 46 H 0.120 0.880 47 H 0.386 0.614 48 H -0.307 1.307 49 H -0.277 1.277 50 H 0.144 0.856 51 H 0.158 0.842 52 H 0.157 0.843 53 H 0.109 0.891 54 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -28.420 -19.106 32.243 47.036 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 N 0.055 4.945 3 H 0.271 0.729 4 C -0.189 4.189 5 C -0.079 4.079 6 H 0.191 0.809 7 C -0.179 4.179 8 C -0.139 4.139 9 H 0.136 0.864 10 C -0.002 4.002 11 N -0.371 5.371 12 C 0.295 3.705 13 O -0.472 6.472 14 C -0.169 4.169 15 C -0.142 4.142 16 C -0.019 4.019 17 O -0.254 6.254 18 C 0.072 3.928 19 C -0.170 4.170 20 C -0.082 4.082 21 C -0.198 4.198 22 O -0.358 6.358 23 Si 0.683 3.317 24 C -0.180 4.180 25 C -0.091 4.091 26 C -0.221 4.221 27 C -0.179 4.179 28 H 0.146 0.854 29 H 0.141 0.859 30 H 0.137 0.863 31 H 0.144 0.856 32 H 0.141 0.859 33 H 0.140 0.860 34 H 0.120 0.880 35 H 0.129 0.871 36 H 0.067 0.933 37 H 0.083 0.917 38 H 0.257 0.743 39 H 0.147 0.853 40 H 0.144 0.856 41 H 0.076 0.924 42 H 0.077 0.923 43 H 0.101 0.899 44 H 0.101 0.899 45 H 0.134 0.866 46 H 0.138 0.862 47 H 0.235 0.765 48 H -0.236 1.236 49 H -0.203 1.203 50 H 0.161 0.839 51 H 0.176 0.824 52 H 0.174 0.826 53 H 0.128 0.872 54 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -28.551 -18.061 31.622 46.275 hybrid contribution 0.348 1.040 0.737 1.322 sum -28.203 -17.021 32.360 46.177 Atomic orbital electron populations 1.24107 0.75888 1.09692 1.09445 1.45051 1.16004 1.18961 1.14463 0.72903 1.24111 1.05685 1.02520 0.86553 1.24927 0.97669 1.02174 0.83148 0.80906 1.23517 0.97464 1.03547 0.93395 1.22595 0.96769 0.99391 0.95101 0.86414 1.21424 0.84018 0.97767 0.96996 1.45863 1.21966 1.19252 1.50039 1.21063 0.87153 0.84215 0.78065 1.90767 1.71368 1.23897 1.61192 1.21537 0.93858 0.99744 1.01760 1.21168 0.94418 0.99059 0.99506 1.23041 0.95246 0.89261 0.94391 1.86054 1.32987 1.43716 1.62638 1.19152 0.85546 0.94536 0.93555 1.20330 0.96731 0.99165 1.00814 1.20096 0.94283 0.95845 0.97978 1.25361 1.09976 0.88282 0.96188 1.86583 1.67166 1.34483 1.47595 0.93899 0.73785 0.83375 0.80670 1.21226 1.01400 0.93557 1.01840 1.21304 0.94157 0.99660 0.93983 1.21598 0.98064 0.96974 1.05464 1.23646 0.94813 1.05137 0.94258 0.85448 0.85915 0.86300 0.85596 0.85932 0.85957 0.88006 0.87062 0.93328 0.91673 0.74261 0.85295 0.85634 0.92445 0.92282 0.89868 0.89861 0.86620 0.86213 0.76456 1.23586 1.20288 0.83901 0.82421 0.82572 0.87232 0.87539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.09 8.99 127.69 1.15 4.23 16 2 N -0.37 23.88 0.62 -920.17 -0.57 23.31 16 3 H 0.43 -29.28 8.19 -89.69 -0.73 -30.01 16 4 C -0.05 2.97 9.15 127.69 1.17 4.14 16 5 C 0.02 -1.40 2.92 45.44 0.13 -1.27 16 6 H 0.17 -10.75 8.11 -2.39 -0.02 -10.77 16 7 C -0.14 7.49 6.15 31.12 0.19 7.68 16 8 C -0.12 5.66 3.75 -10.27 -0.04 5.63 16 9 H 0.12 -5.56 8.14 -2.39 -0.02 -5.58 16 10 C 0.12 -4.31 5.51 86.38 0.48 -3.83 16 11 N -0.72 23.11 5.56 -463.07 -2.57 20.53 16 12 C 0.51 -11.10 7.83 87.66 0.69 -10.41 16 13 O -0.59 5.71 15.98 -3.04 -0.05 5.66 16 14 C -0.13 3.42 5.70 29.85 0.17 3.59 16 15 C -0.10 1.75 4.87 30.59 0.15 1.90 16 16 C 0.05 -0.96 4.74 71.98 0.34 -0.62 16 17 O -0.34 2.57 10.14 -92.41 -0.94 1.63 16 18 C 0.12 -0.89 6.69 22.51 0.15 -0.74 16 19 C -0.15 0.76 9.62 22.37 0.22 0.98 16 20 C -0.08 0.65 5.35 -19.88 -0.11 0.54 16 21 C -0.09 0.71 2.80 71.23 0.20 0.91 16 22 O -0.55 2.34 12.83 -148.98 -1.91 0.43 16 23 Si 0.78 -7.96 29.88 68.60 2.05 -5.91 16 24 C -0.16 1.86 8.67 22.28 0.19 2.05 16 25 C -0.07 1.02 10.04 22.25 0.22 1.24 16 26 C -0.20 2.68 9.04 22.37 0.20 2.88 16 27 C -0.14 7.67 7.11 31.12 0.22 7.89 16 28 H 0.13 -7.93 8.14 -2.39 -0.02 -7.95 16 29 H 0.12 -7.59 8.14 -2.39 -0.02 -7.61 16 30 H 0.12 -7.25 7.13 -2.38 -0.02 -7.27 16 31 H 0.13 -7.91 8.14 -2.39 -0.02 -7.93 16 32 H 0.12 -7.69 8.13 -2.39 -0.02 -7.71 16 33 H 0.12 -7.66 8.00 -2.39 -0.02 -7.68 16 34 H 0.10 -5.20 8.14 -2.39 -0.02 -5.22 16 35 H 0.11 -5.95 8.00 -2.38 -0.02 -5.97 16 36 H 0.05 -1.41 8.14 -2.39 -0.02 -1.43 16 37 H 0.06 -2.21 7.84 -2.39 -0.02 -2.23 16 38 H 0.42 -16.47 8.47 -92.71 -0.79 -17.26 16 39 H 0.13 -4.16 8.14 -2.39 -0.02 -4.18 16 40 H 0.13 -3.92 8.14 -2.39 -0.02 -3.94 16 41 H 0.06 -0.66 8.10 -2.39 -0.02 -0.68 16 42 H 0.06 -0.72 8.10 -2.39 -0.02 -0.73 16 43 H 0.08 -1.80 7.65 -2.38 -0.02 -1.82 16 44 H 0.08 -1.78 7.67 -2.39 -0.02 -1.79 16 45 H 0.12 -0.31 8.06 -2.91 -0.02 -0.34 16 46 H 0.12 -1.03 7.96 -2.39 -0.02 -1.05 16 47 H 0.39 -3.99 8.70 -74.06 -0.64 -4.64 16 48 H -0.31 0.52 7.11 99.48 0.71 1.22 16 49 H -0.28 2.09 7.00 99.48 0.70 2.79 16 50 H 0.14 -2.12 4.83 -2.91 -0.01 -2.14 16 51 H 0.16 -3.10 8.06 -2.91 -0.02 -3.13 16 52 H 0.16 -3.08 6.30 -2.91 -0.02 -3.10 16 53 H 0.11 -5.97 7.70 -2.39 -0.02 -5.99 16 54 H 0.11 -5.73 8.14 -2.38 -0.02 -5.74 16 Total: 1.00 -87.93 428.35 0.49 -87.44 By element: Atomic # 1 Polarization: -158.64 SS G_CDS: -1.24 Total: -159.88 kcal Atomic # 6 Polarization: 21.06 SS G_CDS: 5.72 Total: 26.78 kcal Atomic # 7 Polarization: 46.98 SS G_CDS: -3.14 Total: 43.84 kcal Atomic # 8 Polarization: 10.62 SS G_CDS: -2.90 Total: 7.72 kcal Atomic # 14 Polarization: -7.96 SS G_CDS: 2.05 Total: -5.91 kcal Total: -87.93 0.49 -87.44 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11760412_4549616.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.902 kcal (2) G-P(sol) polarization free energy of solvation -87.935 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.440 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds