Wall clock time and date at job start Sat Mar 6 2021 16:06:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46893 * 1 3 3 H 1.00900 * 109.47098 * 2 1 4 4 C 1.46904 * 109.47100 * 119.99509 * 2 1 3 5 5 C 1.46895 * 109.47745 * 239.99562 * 2 1 3 6 6 H 1.09005 * 112.84766 * 311.20228 * 5 2 1 7 7 C 1.53786 * 113.61519 * 82.49772 * 5 2 1 8 8 C 1.53778 * 87.07979 * 139.98553 * 7 5 2 9 9 H 1.09002 * 113.69351 * 89.12818 * 8 7 5 10 10 C 1.53003 * 113.61509 * 220.02371 * 8 7 5 11 11 N 1.46502 * 109.46765 * 272.49861 * 10 8 7 12 12 C 1.34783 * 119.99865 * 179.97438 * 11 10 8 13 13 O 1.21280 * 119.99965 * 359.97438 * 12 11 10 14 14 C 1.50702 * 119.99941 * 180.02562 * 12 11 10 15 15 O 1.42895 * 109.46976 * 179.97438 * 14 12 11 16 16 C 1.35902 * 116.99994 * 179.97438 * 15 14 12 17 17 C 1.38710 * 120.05864 * 180.02562 * 16 15 14 18 18 N 1.48014 * 120.02579 * 359.97438 * 17 16 15 19 19 O 1.21800 * 119.99967 * 180.02562 * 18 17 16 20 20 O 1.21798 * 119.99858 * 359.97438 * 18 17 16 21 21 C 1.38159 * 119.94806 * 179.97438 * 17 16 15 22 22 C 1.38250 * 120.05406 * 359.97438 * 21 17 16 23 23 C 1.50702 * 119.94443 * 180.02562 * 22 21 17 24 24 O 1.42903 * 109.47339 * 299.98482 * 23 22 21 25 25 Si 1.86295 * 109.47062 * 179.97438 * 23 22 21 26 26 C 1.38281 * 120.11153 * 359.97438 * 22 21 17 27 27 C 1.38125 * 120.05855 * 0.02562 * 26 22 21 28 28 C 1.53777 * 87.08470 * 334.57127 * 8 7 5 29 29 H 1.09003 * 109.46745 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47517 * 300.00313 * 1 2 3 31 31 H 1.08998 * 109.47273 * 60.01087 * 1 2 3 32 32 H 1.09001 * 109.47248 * 180.02562 * 4 2 1 33 33 H 1.08997 * 109.47077 * 299.99890 * 4 2 1 34 34 H 1.08990 * 109.47198 * 60.00219 * 4 2 1 35 35 H 1.09004 * 113.60966 * 25.44106 * 7 5 2 36 36 H 1.09001 * 113.61651 * 254.53696 * 7 5 2 37 37 H 1.08994 * 109.47566 * 152.50073 * 10 8 7 38 38 H 1.09000 * 109.47348 * 32.49666 * 10 8 7 39 39 H 0.96997 * 120.00341 * 359.97438 * 11 10 8 40 40 H 1.08997 * 109.47406 * 59.99836 * 14 12 11 41 41 H 1.09000 * 109.46956 * 300.00019 * 14 12 11 42 42 H 1.08003 * 119.97769 * 180.02562 * 21 17 16 43 43 H 1.09004 * 109.46977 * 59.98353 * 23 22 21 44 44 H 0.96700 * 114.00156 * 180.02562 * 24 23 22 45 45 H 1.48500 * 110.00167 * 60.00452 * 25 23 22 46 46 H 1.48500 * 110.00020 * 181.32003 * 25 23 22 47 47 H 1.08005 * 119.97512 * 179.97438 * 26 22 21 48 48 H 1.07994 * 120.03306 * 179.72466 * 27 26 22 49 49 H 1.08996 * 113.61933 * 139.97849 * 28 8 7 50 50 H 1.09004 * 113.61607 * 270.88494 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9587 -0.6925 -1.1993 6 1 1.4760 -1.6569 -1.3580 7 6 1.9907 0.1961 -2.4540 8 6 3.3294 -0.4766 -2.8004 9 1 3.2230 -1.3818 -3.3983 10 6 4.3727 0.4894 -3.3654 11 7 4.2089 0.5902 -4.8177 12 6 5.0236 1.3902 -5.5339 13 8 5.8919 2.0270 -4.9760 14 6 4.8547 1.4943 -7.0278 15 8 5.8283 2.3973 -7.5554 16 6 5.8135 2.6050 -8.8984 17 6 6.7310 3.4688 -9.4781 18 7 7.7274 4.1660 -8.6343 19 8 8.5326 4.9248 -9.1437 20 8 7.7415 3.9817 -7.4304 21 6 6.7142 3.6779 -10.8436 22 6 5.7841 3.0265 -11.6324 23 6 5.7684 3.2559 -13.1217 24 8 5.5381 4.6409 -13.3880 25 14 4.4094 2.2409 -13.8920 26 6 4.8690 2.1641 -11.0571 27 6 4.8817 1.9517 -9.6923 28 6 3.4925 -0.7481 -1.2956 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 -0.3634 0.5137 -0.8901 32 1 3.0486 -0.6920 1.1998 33 1 1.5953 -0.1785 2.0894 34 1 1.5953 -1.7200 1.1996 35 1 2.0808 1.2598 -2.2334 36 1 1.1945 -0.0238 -3.1653 37 1 5.3721 0.1190 -3.1374 38 1 4.2385 1.4731 -2.9155 39 1 3.5142 0.0812 -5.2640 40 1 3.8551 1.8646 -7.2556 41 1 4.9890 0.5108 -7.4780 42 1 7.4287 4.3500 -11.2955 43 1 6.7280 2.9592 -13.5452 44 1 5.5148 4.8620 -14.3291 45 1 3.0957 2.6357 -13.3231 46 1 4.4037 2.4337 -15.3644 47 1 4.1432 1.6567 -11.6753 48 1 4.1640 1.2815 -9.2429 49 1 3.9087 -1.7302 -1.0716 50 1 3.9931 0.0574 -0.7583 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11760412_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:06:18 Heat of formation + Delta-G solvation = 61.507226 kcal Electronic energy + Delta-G solvation = -32825.185573 eV Core-core repulsion = 28135.804780 eV Total energy + Delta-G solvation = -4689.380793 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.179 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.32784 -42.58025 -41.77363 -40.71424 -39.42549 -38.38301 -37.66869 -37.52724 -35.46683 -33.55396 -32.38973 -30.86948 -29.63191 -28.66011 -27.85528 -26.72389 -26.53807 -26.20859 -24.21746 -23.57582 -22.74825 -21.92448 -21.16404 -20.47665 -19.81016 -19.18486 -18.79736 -18.68105 -18.53870 -18.51505 -17.69983 -17.61939 -17.42519 -17.12318 -16.83927 -16.53147 -16.37994 -15.94587 -15.91419 -15.55738 -15.09608 -14.68016 -14.38425 -14.15656 -13.89703 -13.86698 -13.83802 -13.76280 -13.63554 -13.50053 -13.23046 -13.18395 -13.13270 -12.84754 -12.74358 -12.70764 -12.37892 -12.31167 -12.17011 -12.15002 -11.94369 -11.87595 -11.53278 -11.04411 -10.85492 -10.65185 -10.21553 -9.79581 -4.96781 -1.33817 -0.26547 0.13123 0.32063 0.99955 1.20407 1.23795 1.44028 1.60383 1.96229 2.00357 2.30017 2.60412 2.91388 2.99134 3.03376 3.19431 3.29266 3.40937 3.45616 3.52088 3.58973 3.68246 3.68973 3.71953 3.84594 3.94738 4.00655 4.09406 4.20844 4.21738 4.27321 4.29605 4.33427 4.39168 4.45004 4.47928 4.56675 4.59685 4.69624 4.76317 4.79649 4.83642 4.84435 4.85957 4.91518 5.01301 5.04720 5.15934 5.22270 5.37884 5.73666 6.39255 6.42060 6.47975 7.14499 Molecular weight = 367.18amu Principal moments of inertia in cm(-1) A = 0.014754 B = 0.001751 C = 0.001608 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1897.372957 B =15983.907029 C =17406.862637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.369 5.369 3 H 0.434 0.566 4 C -0.049 4.049 5 C 0.022 3.978 6 H 0.175 0.825 7 C -0.141 4.141 8 C -0.117 4.117 9 H 0.123 0.877 10 C 0.123 3.877 11 N -0.706 5.706 12 C 0.507 3.493 13 O -0.568 6.568 14 C 0.017 3.983 15 O -0.292 6.292 16 C 0.196 3.804 17 C -0.105 4.105 18 N 0.034 4.966 19 O -0.217 6.217 20 O -0.159 6.159 21 C -0.008 4.008 22 C -0.112 4.112 23 C -0.098 4.098 24 O -0.563 6.563 25 Si 0.790 3.210 26 C -0.007 4.007 27 C -0.184 4.184 28 C -0.142 4.142 29 H 0.122 0.878 30 H 0.124 0.876 31 H 0.122 0.878 32 H 0.118 0.882 33 H 0.126 0.874 34 H 0.123 0.877 35 H 0.109 0.891 36 H 0.109 0.891 37 H 0.051 0.949 38 H 0.066 0.934 39 H 0.424 0.576 40 H 0.143 0.857 41 H 0.145 0.855 42 H 0.146 0.854 43 H 0.096 0.904 44 H 0.399 0.601 45 H -0.275 1.275 46 H -0.298 1.298 47 H 0.188 0.812 48 H 0.214 0.786 49 H 0.102 0.898 50 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.745 -21.351 28.117 44.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.054 4.946 3 H 0.271 0.729 4 C -0.191 4.191 5 C -0.081 4.081 6 H 0.193 0.807 7 C -0.179 4.179 8 C -0.136 4.136 9 H 0.141 0.859 10 C 0.000 4.000 11 N -0.362 5.362 12 C 0.292 3.708 13 O -0.445 6.445 14 C -0.060 4.060 15 O -0.202 6.202 16 C 0.146 3.854 17 C -0.191 4.191 18 N 0.545 4.455 19 O -0.420 6.420 20 O -0.377 6.377 21 C -0.027 4.027 22 C -0.113 4.113 23 C -0.205 4.205 24 O -0.374 6.374 25 Si 0.693 3.307 26 C -0.025 4.025 27 C -0.202 4.202 28 C -0.180 4.180 29 H 0.141 0.859 30 H 0.143 0.857 31 H 0.141 0.859 32 H 0.136 0.864 33 H 0.144 0.856 34 H 0.141 0.859 35 H 0.127 0.873 36 H 0.128 0.872 37 H 0.069 0.931 38 H 0.084 0.916 39 H 0.263 0.737 40 H 0.161 0.839 41 H 0.162 0.838 42 H 0.163 0.837 43 H 0.114 0.886 44 H 0.250 0.750 45 H -0.202 1.202 46 H -0.225 1.225 47 H 0.204 0.796 48 H 0.231 0.769 49 H 0.120 0.880 50 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -27.249 -21.322 28.476 44.811 hybrid contribution 1.239 2.070 -0.748 2.526 sum -26.010 -19.252 27.728 42.615 Atomic orbital electron populations 1.24100 0.75554 1.09651 1.09507 1.45059 1.16198 1.18911 1.14391 0.72909 1.24095 1.05575 1.02687 0.86750 1.24963 0.97819 1.01195 0.84094 0.80744 1.23663 0.98339 1.00057 0.95812 1.22603 0.94376 0.99430 0.97221 0.85888 1.21472 0.99656 0.99911 0.78964 1.45575 1.35795 1.46337 1.08501 1.20419 0.81545 0.79610 0.89191 1.90878 1.35123 1.45633 1.72905 1.23228 0.94199 0.96646 0.91903 1.86465 1.54737 1.61692 1.17295 1.18871 0.91606 0.90719 0.84166 1.20834 0.98515 1.07807 0.91894 1.43877 1.00776 0.99219 1.01662 1.94534 1.36216 1.34412 1.76850 1.94629 1.77595 1.68126 0.97349 1.20817 0.97568 0.95607 0.88742 1.19458 0.96856 0.99832 0.95188 1.25287 1.11776 0.88729 0.94699 1.86535 1.94864 1.23842 1.32134 0.94296 0.74062 0.85976 0.76409 1.21689 0.94005 0.91752 0.95023 1.21800 1.00710 1.04257 0.93442 1.23518 0.93006 1.06089 0.95400 0.85898 0.85748 0.85914 0.86350 0.85562 0.85874 0.87316 0.87233 0.93069 0.91572 0.73740 0.83914 0.83800 0.83666 0.88641 0.74989 1.20175 1.22534 0.79569 0.76925 0.87984 0.87233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.96 9.15 127.69 1.17 4.13 16 2 N -0.37 24.14 0.62 -920.18 -0.57 23.57 16 3 H 0.43 -29.46 8.19 -89.69 -0.73 -30.19 16 4 C -0.05 3.08 8.99 127.69 1.15 4.23 16 5 C 0.02 -1.33 2.92 45.44 0.13 -1.20 16 6 H 0.18 -11.09 8.11 -2.38 -0.02 -11.11 16 7 C -0.14 7.90 7.12 31.12 0.22 8.13 16 8 C -0.12 5.77 3.75 -10.27 -0.04 5.74 16 9 H 0.12 -6.14 8.14 -2.39 -0.02 -6.16 16 10 C 0.12 -4.55 5.51 86.38 0.48 -4.07 16 11 N -0.71 24.43 5.56 -463.05 -2.57 21.86 16 12 C 0.51 -11.26 7.91 87.66 0.69 -10.57 16 13 O -0.57 4.09 16.50 16.01 0.26 4.35 16 14 C 0.02 -0.46 5.22 71.24 0.37 -0.09 16 15 O -0.29 3.63 7.68 -63.42 -0.49 3.14 16 16 C 0.20 -2.71 6.67 22.51 0.15 -2.56 16 17 C -0.11 0.55 6.87 36.47 0.25 0.80 16 18 N 0.03 0.14 4.45 -46.24 -0.21 -0.06 16 19 O -0.22 -1.62 18.45 18.89 0.35 -1.27 16 20 O -0.16 -1.17 17.24 25.61 0.44 -0.73 16 21 C -0.01 0.07 9.11 22.25 0.20 0.27 16 22 C -0.11 1.74 5.42 -19.85 -0.11 1.63 16 23 C -0.10 1.67 2.81 71.24 0.20 1.87 16 24 O -0.56 6.71 12.74 -148.98 -1.90 4.81 16 25 Si 0.79 -16.54 29.78 68.60 2.04 -14.50 16 26 C -0.01 0.17 8.66 22.25 0.19 0.36 16 27 C -0.18 4.57 9.04 22.37 0.20 4.77 16 28 C -0.14 7.68 6.15 31.12 0.19 7.88 16 29 H 0.12 -7.80 8.13 -2.39 -0.02 -7.82 16 30 H 0.12 -7.85 8.14 -2.39 -0.02 -7.87 16 31 H 0.12 -7.78 8.00 -2.39 -0.02 -7.79 16 32 H 0.12 -7.24 7.13 -2.39 -0.02 -7.26 16 33 H 0.13 -7.88 8.14 -2.39 -0.02 -7.90 16 34 H 0.12 -7.67 8.14 -2.39 -0.02 -7.69 16 35 H 0.11 -6.06 7.70 -2.38 -0.02 -6.08 16 36 H 0.11 -6.13 8.14 -2.39 -0.02 -6.15 16 37 H 0.05 -1.55 8.14 -2.39 -0.02 -1.57 16 38 H 0.07 -2.30 7.84 -2.39 -0.02 -2.32 16 39 H 0.42 -18.40 8.47 -92.71 -0.79 -19.18 16 40 H 0.14 -5.13 7.66 -2.39 -0.02 -5.15 16 41 H 0.14 -5.14 7.66 -2.39 -0.02 -5.16 16 42 H 0.15 -0.85 7.61 -2.91 -0.02 -0.87 16 43 H 0.10 -1.85 7.96 -2.38 -0.02 -1.87 16 44 H 0.40 -7.58 8.74 -74.06 -0.65 -8.23 16 45 H -0.28 4.63 7.11 99.48 0.71 5.33 16 46 H -0.30 4.01 7.11 99.48 0.71 4.71 16 47 H 0.19 -5.70 4.88 -2.91 -0.01 -5.71 16 48 H 0.21 -7.88 6.30 -2.91 -0.02 -7.90 16 49 H 0.10 -5.32 8.14 -2.39 -0.02 -5.33 16 50 H 0.11 -5.92 8.00 -2.39 -0.02 -5.94 16 Total: 1.00 -104.39 411.93 1.69 -102.70 By element: Atomic # 1 Polarization: -164.06 SS G_CDS: -1.13 Total: -165.19 kcal Atomic # 6 Polarization: 15.87 SS G_CDS: 5.45 Total: 21.32 kcal Atomic # 7 Polarization: 48.71 SS G_CDS: -3.35 Total: 45.36 kcal Atomic # 8 Polarization: 11.64 SS G_CDS: -1.33 Total: 10.31 kcal Atomic # 14 Polarization: -16.54 SS G_CDS: 2.04 Total: -14.50 kcal Total: -104.39 1.69 -102.70 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11760412_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 164.210 kcal (2) G-P(sol) polarization free energy of solvation -104.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.820 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -102.703 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds