Wall clock time and date at job start Sat Mar 6 2021 16:06:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35982 * 117.00132 * 2 1 4 4 C 1.38682 * 120.00190 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.99798 * 180.02562 * 4 3 2 6 6 C 1.50705 * 120.00055 * 179.97438 * 5 4 3 7 7 O 1.42908 * 109.46603 * 255.00069 * 6 5 4 8 8 Si 1.86298 * 109.46780 * 14.99368 * 6 5 4 9 9 C 1.38684 * 120.00226 * 0.25280 * 5 4 3 10 10 O 1.35986 * 119.99743 * 179.72718 * 9 5 4 11 11 C 1.42905 * 116.99449 * 180.02562 * 10 9 5 12 12 C 1.50702 * 109.46779 * 180.02562 * 11 10 9 13 13 O 1.21281 * 119.99904 * 0.02562 * 12 11 10 14 14 N 1.34780 * 119.99678 * 180.02562 * 12 11 10 15 15 C 1.46496 * 119.99696 * 180.02562 * 14 12 11 16 16 C 1.53001 * 109.47087 * 179.97438 * 15 14 12 17 17 H 1.09005 * 112.84740 * 43.79967 * 16 15 14 18 18 C 1.53784 * 113.61498 * 174.99703 * 16 15 14 19 19 C 1.53780 * 87.07936 * 139.97978 * 18 16 15 20 20 H 1.08994 * 113.61573 * 89.20096 * 19 18 16 21 21 N 1.46908 * 113.61261 * 220.02053 * 19 18 16 22 22 H 1.00895 * 109.47153 * 59.99827 * 21 19 18 23 23 C 1.46897 * 109.46859 * 179.97438 * 21 19 18 24 24 C 1.46899 * 109.46591 * 299.99965 * 21 19 18 25 25 C 1.53780 * 113.61012 * 272.49206 * 16 15 14 26 26 C 1.38719 * 119.99786 * 359.47418 * 9 5 4 27 27 C 1.38112 * 119.99801 * 0.54476 * 26 9 5 28 28 H 1.09006 * 109.46831 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47131 * 299.99574 * 1 2 3 30 30 H 1.08996 * 109.46980 * 60.00055 * 1 2 3 31 31 H 1.07995 * 120.00037 * 0.04400 * 4 3 2 32 32 H 1.08991 * 109.47403 * 134.99585 * 6 5 4 33 33 H 0.96700 * 113.99903 * 299.99099 * 7 6 5 34 34 H 1.48506 * 109.99834 * 60.00830 * 8 6 5 35 35 H 1.48502 * 110.00011 * 181.32094 * 8 6 5 36 36 H 1.09002 * 109.47042 * 300.00175 * 11 10 9 37 37 H 1.09002 * 109.47314 * 60.00028 * 11 10 9 38 38 H 0.96993 * 120.00050 * 359.97438 * 14 12 11 39 39 H 1.09002 * 109.47151 * 299.99528 * 15 14 12 40 40 H 1.09002 * 109.47482 * 59.99551 * 15 14 12 41 41 H 1.08995 * 113.61060 * 254.52924 * 18 16 15 42 42 H 1.09003 * 113.61313 * 25.43314 * 18 16 15 43 43 H 1.09003 * 109.46953 * 60.00246 * 23 21 19 44 44 H 1.09000 * 109.46865 * 179.97438 * 23 21 19 45 45 H 1.08996 * 109.47220 * 299.99754 * 23 21 19 46 46 H 1.08996 * 109.47597 * 60.00102 * 24 21 19 47 47 H 1.09000 * 109.46703 * 180.02562 * 24 21 19 48 48 H 1.08999 * 109.47304 * 299.99685 * 24 21 19 49 49 H 1.08997 * 113.61788 * 334.57122 * 25 16 15 50 50 H 1.09004 * 113.61182 * 105.47115 * 25 16 15 51 51 H 1.07997 * 120.00252 * 180.27705 * 26 9 5 52 52 H 1.08005 * 119.99671 * 179.72643 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5151 0.0000 6 6 5.5633 2.5941 0.0000 7 8 6.0207 2.9667 1.3016 8 14 6.2723 0.9325 -0.4552 9 6 3.3030 3.6782 0.0064 10 8 3.9205 4.8898 0.0125 11 6 3.0804 6.0459 0.0194 12 6 3.9347 7.2874 0.0249 13 8 5.1437 7.1916 0.0226 14 7 3.3550 8.5041 0.0324 15 6 4.1854 9.7110 0.0372 16 6 3.2860 10.9488 0.0447 17 1 2.4518 10.8616 0.7408 18 6 4.0597 12.2716 0.1730 19 6 3.0753 12.8559 -0.8538 20 1 2.1833 13.2920 -0.4043 21 7 3.7095 13.7425 -1.8386 22 1 4.4101 13.2287 -2.3517 23 6 2.6920 14.2464 -2.7706 24 6 4.3413 14.8726 -1.1447 25 6 2.8723 11.4181 -1.3601 26 6 1.9178 3.6056 0.0012 27 6 1.2908 2.3750 0.0010 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5137 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 4.0194 0.3785 -0.0017 32 1 5.8881 3.3390 -0.7263 33 1 5.6901 3.8235 1.6043 34 1 5.8041 0.5336 -1.8069 35 1 7.7560 0.9885 -0.4277 36 1 2.4505 6.0426 -0.8701 37 1 2.4518 6.0329 0.9098 38 1 2.3881 8.5807 0.0339 39 1 4.8163 9.7145 0.9260 40 1 4.8130 9.7238 -0.8539 41 1 3.9834 12.7280 1.1599 42 1 5.0860 12.2141 -0.1897 43 1 1.9349 14.8014 -2.2165 44 1 3.1625 14.9046 -3.5010 45 1 2.2236 13.4076 -3.2854 46 1 5.0964 14.4984 -0.4534 47 1 4.8115 15.5307 -1.8754 48 1 3.5845 15.4277 -0.5904 49 1 3.5739 11.1272 -2.1419 50 1 1.8373 11.1856 -1.6109 51 1 1.3295 4.5113 0.0016 52 1 0.2122 2.3185 0.0015 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11760412_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:06:34 Heat of formation + Delta-G solvation = 20.211072 kcal Electronic energy + Delta-G solvation = -31082.876601 eV Core-core repulsion = 26748.501697 eV Total energy + Delta-G solvation = -4334.374904 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.61219 -41.84793 -40.88925 -39.88191 -38.51383 -38.10066 -36.97153 -35.50460 -32.85587 -31.37206 -30.31690 -29.65815 -28.56485 -27.93480 -26.64555 -26.62187 -26.33077 -24.06131 -23.40317 -22.45119 -21.93686 -21.16222 -19.57561 -18.85112 -18.76713 -18.54066 -18.13426 -17.75331 -17.55389 -17.41083 -17.15425 -16.91702 -16.66611 -16.44013 -16.13218 -15.79976 -15.62245 -15.47869 -15.16666 -14.63236 -14.48943 -14.18798 -14.14123 -13.91615 -13.85469 -13.68112 -13.57333 -13.54605 -13.45620 -13.25728 -13.15864 -13.07399 -12.86777 -12.53848 -12.35439 -12.20099 -12.07290 -11.91982 -11.57333 -11.47590 -11.35246 -11.27080 -11.04029 -10.26418 -10.12895 -8.85318 -4.96428 0.03311 0.30258 0.97448 1.29582 1.38449 1.43439 1.53911 1.86668 2.32541 2.49201 2.52111 2.60520 2.88346 2.95856 3.36298 3.40527 3.48093 3.54990 3.59505 3.67443 3.72485 3.82046 3.93505 4.03670 4.05404 4.06763 4.10329 4.17124 4.18550 4.23613 4.24042 4.29790 4.36629 4.41742 4.41924 4.42256 4.52787 4.65413 4.67577 4.73075 4.75551 4.77527 4.81277 4.83659 4.87594 4.93633 4.97647 5.07734 5.17960 5.18309 5.32992 5.39182 6.09597 6.36213 6.43072 6.50369 7.07080 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.015812 B = 0.001916 C = 0.001766 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1770.369078 B =14612.452435 C =15853.692066 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.336 6.336 3 C 0.089 3.911 4 C -0.122 4.122 5 C -0.119 4.119 6 C -0.073 4.073 7 O -0.545 6.545 8 Si 0.797 3.203 9 C 0.093 3.907 10 O -0.317 6.317 11 C 0.031 3.969 12 C 0.512 3.488 13 O -0.572 6.572 14 N -0.709 5.709 15 C 0.124 3.876 16 C -0.119 4.119 17 H 0.121 0.879 18 C -0.140 4.140 19 C 0.022 3.978 20 H 0.174 0.826 21 N -0.368 5.368 22 H 0.434 0.566 23 C -0.046 4.046 24 C -0.049 4.049 25 C -0.142 4.142 26 C -0.156 4.156 27 C -0.162 4.162 28 H 0.111 0.889 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.147 0.853 32 H 0.067 0.933 33 H 0.372 0.628 34 H -0.266 1.266 35 H -0.295 1.295 36 H 0.123 0.877 37 H 0.123 0.877 38 H 0.422 0.578 39 H 0.053 0.947 40 H 0.067 0.933 41 H 0.102 0.898 42 H 0.111 0.889 43 H 0.122 0.878 44 H 0.125 0.875 45 H 0.122 0.878 46 H 0.119 0.881 47 H 0.127 0.873 48 H 0.122 0.878 49 H 0.110 0.890 50 H 0.107 0.893 51 H 0.172 0.828 52 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.962 39.814 -6.767 41.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.250 6.250 3 C 0.043 3.957 4 C -0.140 4.140 5 C -0.120 4.120 6 C -0.181 4.181 7 O -0.351 6.351 8 Si 0.700 3.300 9 C 0.048 3.952 10 O -0.230 6.230 11 C -0.047 4.047 12 C 0.298 3.702 13 O -0.451 6.451 14 N -0.364 5.364 15 C 0.001 3.999 16 C -0.138 4.138 17 H 0.139 0.861 18 C -0.178 4.178 19 C -0.081 4.081 20 H 0.192 0.808 21 N 0.055 4.945 22 H 0.271 0.729 23 C -0.188 4.188 24 C -0.191 4.191 25 C -0.179 4.179 26 C -0.174 4.174 27 C -0.181 4.181 28 H 0.130 0.870 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.165 0.835 32 H 0.084 0.916 33 H 0.221 0.779 34 H -0.191 1.191 35 H -0.223 1.223 36 H 0.141 0.859 37 H 0.141 0.859 38 H 0.260 0.740 39 H 0.071 0.929 40 H 0.086 0.914 41 H 0.120 0.880 42 H 0.129 0.871 43 H 0.141 0.859 44 H 0.143 0.857 45 H 0.140 0.860 46 H 0.137 0.863 47 H 0.145 0.855 48 H 0.141 0.859 49 H 0.128 0.872 50 H 0.126 0.874 51 H 0.190 0.810 52 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -9.224 38.769 -7.237 40.503 hybrid contribution -0.491 1.294 -0.354 1.429 sum -9.715 40.063 -7.591 41.917 Atomic orbital electron populations 1.23348 0.76349 1.05559 1.02413 1.86097 1.23428 1.26588 1.88913 1.19034 0.91976 0.85453 0.99192 1.20201 0.92487 0.96942 1.04378 1.19428 0.95953 0.91061 1.05535 1.25333 0.92778 1.11898 0.88069 1.86695 1.74164 1.42291 1.31972 0.92129 0.76472 0.79745 0.81697 1.18701 0.91593 0.84200 1.00742 1.86085 1.35576 1.11913 1.89469 1.22806 0.92946 0.82192 1.06742 1.20433 0.88114 0.85752 0.75897 1.90803 1.16836 1.87475 1.49953 1.45627 1.11669 1.04112 1.74956 1.21481 0.93586 0.82848 1.02019 1.22610 0.99530 0.92236 0.99452 0.86143 1.23513 0.99238 0.94110 1.00987 1.24950 1.00846 0.91088 0.91169 0.80828 1.45054 1.17401 1.16244 1.15814 0.72882 1.24101 0.93745 1.05490 0.95483 1.24101 1.03037 0.89545 1.02429 1.23660 1.06020 0.91150 0.97083 1.21365 0.91978 0.99884 1.04209 1.21441 1.01597 0.91009 1.04046 0.87049 0.91312 0.91379 0.83544 0.91566 0.77916 1.19121 1.22287 0.85897 0.85911 0.73985 0.92906 0.91424 0.87961 0.87060 0.85938 0.85661 0.85972 0.86297 0.85486 0.85917 0.87201 0.87449 0.81029 0.82159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.29 9.81 113.37 1.11 0.82 16 2 O -0.34 2.99 10.50 -93.34 -0.98 2.01 16 3 C 0.09 -0.85 6.69 22.49 0.15 -0.70 16 4 C -0.12 0.95 8.59 22.35 0.19 1.15 16 5 C -0.12 0.92 5.28 -19.78 -0.10 0.82 16 6 C -0.07 0.39 2.33 71.24 0.17 0.56 16 7 O -0.54 2.03 12.65 -148.98 -1.89 0.14 16 8 Si 0.80 -4.84 30.17 68.60 2.07 -2.77 16 9 C 0.09 -1.13 6.61 22.49 0.15 -0.98 16 10 O -0.32 4.15 8.54 -74.35 -0.64 3.51 16 11 C 0.03 -0.75 5.22 71.24 0.37 -0.38 16 12 C 0.51 -11.15 7.91 87.66 0.69 -10.46 16 13 O -0.57 5.18 16.50 16.01 0.26 5.44 16 14 N -0.71 23.68 5.56 -463.06 -2.57 21.10 16 15 C 0.12 -4.54 5.51 86.38 0.48 -4.07 16 16 C -0.12 5.80 3.75 -10.27 -0.04 5.76 16 17 H 0.12 -5.87 8.14 -2.38 -0.02 -5.89 16 18 C -0.14 7.57 6.15 31.12 0.19 7.76 16 19 C 0.02 -1.34 2.92 45.44 0.13 -1.20 16 20 H 0.17 -10.93 8.11 -2.39 -0.02 -10.95 16 21 N -0.37 24.07 0.62 -920.17 -0.57 23.50 16 22 H 0.43 -29.51 8.19 -89.70 -0.73 -30.24 16 23 C -0.05 2.95 9.15 127.69 1.17 4.12 16 24 C -0.05 3.09 8.99 127.69 1.15 4.24 16 25 C -0.14 7.84 7.11 31.12 0.22 8.06 16 26 C -0.16 2.79 9.03 22.35 0.20 2.99 16 27 C -0.16 2.52 9.03 22.35 0.20 2.73 16 28 H 0.11 -2.06 8.14 -2.38 -0.02 -2.08 16 29 H 0.07 -1.33 7.66 -2.39 -0.02 -1.35 16 30 H 0.07 -1.32 7.66 -2.39 -0.02 -1.34 16 31 H 0.15 -1.39 5.13 -2.91 -0.01 -1.41 16 32 H 0.07 -0.28 7.83 -2.39 -0.02 -0.30 16 33 H 0.37 -2.72 8.56 -74.06 -0.63 -3.36 16 34 H -0.27 1.01 7.11 99.48 0.71 1.72 16 35 H -0.30 -0.18 7.11 99.48 0.71 0.53 16 36 H 0.12 -3.78 7.65 -2.39 -0.02 -3.80 16 37 H 0.12 -3.71 7.67 -2.39 -0.02 -3.73 16 38 H 0.42 -17.32 8.47 -92.71 -0.79 -18.11 16 39 H 0.05 -1.61 8.14 -2.39 -0.02 -1.63 16 40 H 0.07 -2.37 7.84 -2.39 -0.02 -2.39 16 41 H 0.10 -5.31 8.14 -2.39 -0.02 -5.33 16 42 H 0.11 -6.04 8.00 -2.39 -0.02 -6.06 16 43 H 0.12 -7.73 8.13 -2.39 -0.02 -7.75 16 44 H 0.12 -7.90 8.14 -2.39 -0.02 -7.92 16 45 H 0.12 -7.70 8.00 -2.39 -0.02 -7.71 16 46 H 0.12 -7.29 7.13 -2.39 -0.02 -7.31 16 47 H 0.13 -7.94 8.14 -2.39 -0.02 -7.96 16 48 H 0.12 -7.63 8.14 -2.39 -0.02 -7.65 16 49 H 0.11 -6.09 7.69 -2.39 -0.02 -6.11 16 50 H 0.11 -5.89 8.14 -2.38 -0.02 -5.91 16 51 H 0.17 -4.65 6.29 -2.91 -0.02 -4.66 16 52 H 0.16 -3.39 6.29 -2.91 -0.02 -3.41 16 Total: 1.00 -88.91 414.30 0.95 -87.95 By element: Atomic # 1 Polarization: -160.93 SS G_CDS: -1.17 Total: -162.10 kcal Atomic # 6 Polarization: 14.78 SS G_CDS: 6.43 Total: 21.21 kcal Atomic # 7 Polarization: 47.74 SS G_CDS: -3.14 Total: 44.60 kcal Atomic # 8 Polarization: 14.34 SS G_CDS: -3.24 Total: 11.10 kcal Atomic # 14 Polarization: -4.84 SS G_CDS: 2.07 Total: -2.77 kcal Total: -88.91 0.95 -87.95 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11760412_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.163 kcal (2) G-P(sol) polarization free energy of solvation -88.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds