Wall clock time and date at job start Sat Mar 6 2021 16:07:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 H 1.00892 * 109.47336 * 2 1 4 4 C 1.46899 * 109.46950 * 120.00676 * 2 1 3 5 5 C 1.46903 * 109.47107 * 239.99912 * 2 1 3 6 6 H 1.08997 * 112.85060 * 311.20164 * 5 2 1 7 7 C 1.53788 * 113.61071 * 82.50342 * 5 2 1 8 8 C 1.53783 * 87.07611 * 139.98528 * 7 5 2 9 9 H 1.09002 * 113.69351 * 89.12950 * 8 7 5 10 10 C 1.53002 * 113.61212 * 220.02132 * 8 7 5 11 11 N 1.46504 * 109.46984 * 272.49675 * 10 8 7 12 12 C 1.34775 * 120.00056 * 179.97438 * 11 10 8 13 13 O 1.21282 * 119.99996 * 0.02562 * 12 11 10 14 14 C 1.50703 * 120.00333 * 179.97438 * 12 11 10 15 15 N 1.46499 * 109.47311 * 180.02562 * 14 12 11 16 16 C 1.36833 * 125.06197 * 265.00128 * 15 14 12 17 17 C 1.34232 * 109.93890 * 180.02562 * 16 15 14 18 18 C 1.50701 * 126.50328 * 179.97438 * 17 16 15 19 19 O 1.42896 * 109.46924 * 104.97222 * 18 17 16 20 20 Si 1.86305 * 109.46849 * 344.97607 * 18 17 16 21 21 C 1.46497 * 106.99890 * 359.97438 * 17 16 15 22 22 C 1.39586 * 134.03413 * 180.02562 * 21 17 16 23 23 C 1.36664 * 119.76595 * 180.02562 * 22 21 17 24 24 C 1.38793 * 120.52328 * 359.75017 * 23 22 21 25 25 C 1.37789 * 120.66875 * 0.51110 * 24 23 22 26 26 C 1.37685 * 125.06264 * 85.00489 * 15 14 12 27 27 C 1.53780 * 113.61607 * 180.02562 * 5 2 1 28 28 H 1.08993 * 109.47639 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.46692 * 300.00294 * 1 2 3 30 30 H 1.09002 * 109.46758 * 59.99659 * 1 2 3 31 31 H 1.08999 * 109.47752 * 59.99142 * 4 2 1 32 32 H 1.09000 * 109.47321 * 179.97438 * 4 2 1 33 33 H 1.09004 * 109.47201 * 299.99329 * 4 2 1 34 34 H 1.08995 * 113.61205 * 25.43724 * 7 5 2 35 35 H 1.09003 * 113.61289 * 254.52836 * 7 5 2 36 36 H 1.08997 * 109.47194 * 152.49593 * 10 8 7 37 37 H 1.08999 * 109.47063 * 32.49302 * 10 8 7 38 38 H 0.97001 * 119.99810 * 359.97438 * 11 10 8 39 39 H 1.09007 * 109.46594 * 59.99845 * 14 12 11 40 40 H 1.09004 * 109.47117 * 300.01111 * 14 12 11 41 41 H 1.07998 * 125.02824 * 359.97438 * 16 15 14 42 42 H 1.08995 * 109.47104 * 224.97694 * 18 17 16 43 43 H 0.96704 * 113.99996 * 179.97438 * 19 18 17 44 44 H 1.48491 * 109.99930 * 59.99859 * 20 18 17 45 45 H 1.48502 * 109.99673 * 181.31874 * 20 18 17 46 46 H 1.08001 * 120.12049 * 0.02562 * 22 21 17 47 47 H 1.07992 * 119.73997 * 179.97438 * 23 22 21 48 48 H 1.08000 * 119.66793 * 180.25694 * 24 23 22 49 49 H 1.08002 * 120.11439 * 179.77306 * 25 24 23 50 50 H 1.08995 * 113.61545 * 105.47369 * 27 5 2 51 51 H 1.08993 * 113.61204 * 334.56710 * 27 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9512 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9587 -0.6925 -1.1994 6 1 1.4760 -1.6568 -1.3582 7 6 1.9907 0.1964 -2.4540 8 6 3.3293 -0.4766 -2.8005 9 1 3.2228 -1.3816 -3.3985 10 6 4.3727 0.4894 -3.3655 11 7 4.2089 0.5904 -4.8178 12 6 5.0235 1.3904 -5.5339 13 8 5.8926 2.0264 -4.9760 14 6 4.8554 1.4938 -7.0280 15 7 5.8544 2.4188 -7.5689 16 6 5.6444 3.7492 -7.8103 17 6 6.7611 4.3065 -8.3046 18 6 6.9435 5.7491 -8.7008 19 8 7.7242 6.4201 -7.7097 20 14 5.2769 6.5703 -8.8394 21 6 7.7690 3.2465 -8.3860 22 6 9.0985 3.2022 -8.8089 23 6 9.7873 2.0229 -8.7591 24 6 9.1770 0.8694 -8.2864 25 6 7.8640 0.8895 -7.8690 26 6 7.1442 2.0790 -7.9102 27 6 3.4925 -0.7486 -1.2954 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3632 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 1.5952 -1.7203 1.1994 32 1 3.0486 -0.6931 1.1992 33 1 1.5954 -0.1788 2.0894 34 1 2.0808 1.2599 -2.2333 35 1 1.1945 -0.0235 -3.1653 36 1 5.3721 0.1189 -3.1375 37 1 4.2384 1.4731 -2.9155 38 1 3.5140 0.0814 -5.2640 39 1 3.8558 1.8637 -7.2563 40 1 4.9902 0.5101 -7.4777 41 1 4.7173 4.2731 -7.6306 42 1 7.4547 5.8000 -9.6620 43 1 7.8822 7.3550 -7.9000 44 1 4.5697 6.5075 -7.5352 45 1 5.4414 7.9849 -9.2604 46 1 9.5811 4.0966 -9.1741 47 1 10.8158 1.9890 -9.0867 48 1 9.7356 -0.0541 -8.2492 49 1 7.3969 -0.0142 -7.5062 50 1 3.9083 -1.7310 -1.0717 51 1 3.9933 0.0565 -0.7579 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11760412_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:07:15 Heat of formation + Delta-G solvation = 135.433701 kcal Electronic energy + Delta-G solvation = -30034.605850 eV Core-core repulsion = 26020.713566 eV Total energy + Delta-G solvation = -4013.892284 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.197 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.64286 -42.52134 -40.67934 -38.50509 -38.12011 -37.73812 -35.48214 -34.22742 -31.63512 -30.34280 -30.03437 -29.66311 -28.46434 -26.68515 -26.46612 -25.56763 -23.93940 -23.58931 -22.66640 -21.88522 -21.17059 -20.56354 -18.77199 -18.56909 -18.53222 -18.20634 -17.76123 -17.67007 -17.16916 -16.94866 -16.54679 -16.47956 -16.22989 -15.85762 -15.51341 -15.10245 -14.88064 -14.79994 -14.60338 -14.42928 -14.14904 -13.92418 -13.86575 -13.69602 -13.56454 -13.54955 -13.33461 -13.21639 -13.15330 -12.86206 -12.75232 -12.60975 -12.55567 -12.20643 -12.13417 -11.93127 -11.75752 -11.57578 -11.18568 -10.58137 -10.38222 -10.24131 -9.19402 -8.66318 -4.93114 0.10103 0.59796 0.97049 1.29012 1.36695 1.41968 1.58945 1.69142 1.93630 2.15544 2.56528 2.87570 2.89812 2.95383 3.36877 3.41983 3.51719 3.55461 3.59413 3.67232 3.75436 3.76866 3.80840 3.99345 4.05809 4.13848 4.18074 4.19526 4.22639 4.24373 4.28799 4.36310 4.37446 4.41446 4.51843 4.53019 4.64574 4.67418 4.72356 4.74706 4.76200 4.80380 4.83331 4.86654 4.87574 4.97040 5.10897 5.18870 5.35255 5.47051 5.62311 5.68278 5.71419 6.14293 6.20540 6.43264 6.62318 7.11009 Molecular weight = 345.20amu Principal moments of inertia in cm(-1) A = 0.013514 B = 0.002380 C = 0.002136 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2071.423507 B =11763.928465 C =13108.050686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.368 5.368 3 H 0.434 0.566 4 C -0.049 4.049 5 C 0.022 3.978 6 H 0.175 0.825 7 C -0.140 4.140 8 C -0.118 4.118 9 H 0.121 0.879 10 C 0.125 3.875 11 N -0.710 5.710 12 C 0.488 3.512 13 O -0.577 6.577 14 C 0.084 3.916 15 N -0.466 5.466 16 C 0.078 3.922 17 C -0.184 4.184 18 C -0.063 4.063 19 O -0.565 6.565 20 Si 0.786 3.214 21 C -0.120 4.120 22 C -0.090 4.090 23 C -0.155 4.155 24 C -0.108 4.108 25 C -0.130 4.130 26 C 0.092 3.908 27 C -0.142 4.142 28 H 0.122 0.878 29 H 0.125 0.875 30 H 0.123 0.877 31 H 0.123 0.877 32 H 0.117 0.883 33 H 0.127 0.873 34 H 0.109 0.891 35 H 0.109 0.891 36 H 0.046 0.954 37 H 0.064 0.936 38 H 0.423 0.577 39 H 0.167 0.833 40 H 0.145 0.855 41 H 0.198 0.802 42 H 0.072 0.928 43 H 0.389 0.611 44 H -0.280 1.280 45 H -0.294 1.294 46 H 0.116 0.884 47 H 0.133 0.867 48 H 0.146 0.854 49 H 0.139 0.861 50 H 0.101 0.899 51 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.571 -15.945 23.675 38.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.055 4.945 3 H 0.271 0.729 4 C -0.191 4.191 5 C -0.080 4.080 6 H 0.192 0.808 7 C -0.177 4.177 8 C -0.137 4.137 9 H 0.139 0.861 10 C 0.001 3.999 11 N -0.364 5.364 12 C 0.274 3.726 13 O -0.455 6.455 14 C -0.040 4.040 15 N -0.149 5.149 16 C -0.047 4.047 17 C -0.191 4.191 18 C -0.170 4.170 19 O -0.375 6.375 20 Si 0.689 3.311 21 C -0.124 4.124 22 C -0.109 4.109 23 C -0.174 4.174 24 C -0.128 4.128 25 C -0.151 4.151 26 C -0.013 4.013 27 C -0.180 4.180 28 H 0.141 0.859 29 H 0.143 0.857 30 H 0.141 0.859 31 H 0.141 0.859 32 H 0.136 0.864 33 H 0.145 0.855 34 H 0.127 0.873 35 H 0.128 0.872 36 H 0.065 0.935 37 H 0.082 0.918 38 H 0.261 0.739 39 H 0.184 0.816 40 H 0.163 0.837 41 H 0.215 0.785 42 H 0.090 0.910 43 H 0.238 0.762 44 H -0.206 1.206 45 H -0.221 1.221 46 H 0.134 0.866 47 H 0.151 0.849 48 H 0.164 0.836 49 H 0.157 0.843 50 H 0.120 0.880 51 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -26.837 -15.928 24.778 39.848 hybrid contribution 1.662 1.183 0.148 2.045 sum -25.175 -14.745 24.926 38.373 Atomic orbital electron populations 1.24106 0.75489 1.09674 1.09539 1.45055 1.16241 1.18877 1.14344 0.72922 1.24095 1.05526 1.02712 0.86765 1.24955 0.97742 1.01208 0.84119 0.80753 1.23647 0.98267 1.00019 0.95808 1.22608 0.94508 0.99414 0.97207 0.86118 1.21414 0.99344 0.99665 0.79477 1.45752 1.35858 1.46320 1.08469 1.21421 0.81261 0.79250 0.90699 1.90847 1.35394 1.46277 1.73027 1.22073 0.94682 0.97254 0.90041 1.43380 1.09317 1.08168 1.53992 1.21909 1.00220 0.83260 0.99349 1.19768 0.93926 0.93489 1.11966 1.24541 1.07620 0.92306 0.92567 1.86605 1.73594 1.28091 1.49186 0.94206 0.76043 0.78705 0.82147 1.19386 0.94782 0.93615 1.04658 1.20443 0.92742 0.98442 0.99285 1.20922 1.00928 0.92804 1.02786 1.21150 0.94269 0.99018 0.98314 1.20233 0.94667 0.95405 1.04746 1.18366 0.85631 0.95606 1.01662 1.23520 0.93086 1.06026 0.95394 0.85898 0.85685 0.85896 0.85870 0.86426 0.85492 0.87303 0.87236 0.93507 0.91796 0.73904 0.81576 0.83720 0.78512 0.90970 0.76162 1.20647 1.22131 0.86642 0.84869 0.83629 0.84317 0.88035 0.87288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.94 9.15 127.69 1.17 4.11 16 2 N -0.37 23.96 0.62 -920.15 -0.57 23.39 16 3 H 0.43 -29.31 8.19 -89.70 -0.73 -30.04 16 4 C -0.05 3.06 8.99 127.69 1.15 4.21 16 5 C 0.02 -1.35 2.92 45.44 0.13 -1.21 16 6 H 0.18 -10.95 8.11 -2.39 -0.02 -10.97 16 7 C -0.14 7.73 7.12 31.12 0.22 7.95 16 8 C -0.12 5.71 3.75 -10.25 -0.04 5.67 16 9 H 0.12 -5.85 8.14 -2.39 -0.02 -5.87 16 10 C 0.12 -4.50 5.51 86.38 0.48 -4.02 16 11 N -0.71 23.92 5.56 -463.05 -2.57 21.35 16 12 C 0.49 -10.92 7.90 87.66 0.69 -10.23 16 13 O -0.58 4.85 16.42 -3.04 -0.05 4.80 16 14 C 0.08 -2.16 6.48 85.63 0.55 -1.60 16 15 N -0.47 6.32 2.27 -519.98 -1.18 5.14 16 16 C 0.08 -0.94 9.89 83.00 0.82 -0.12 16 17 C -0.18 1.07 5.61 -18.62 -0.10 0.97 16 18 C -0.06 0.52 3.05 71.24 0.22 0.74 16 19 O -0.57 2.32 12.86 -148.98 -1.92 0.40 16 20 Si 0.79 -11.12 30.79 68.60 2.11 -9.00 16 21 C -0.12 0.27 6.35 -20.20 -0.13 0.14 16 22 C -0.09 0.19 10.05 22.23 0.22 0.41 16 23 C -0.16 0.80 9.97 22.03 0.22 1.02 16 24 C -0.11 0.88 10.01 22.30 0.22 1.10 16 25 C -0.13 1.20 10.00 22.37 0.22 1.43 16 26 C 0.09 -0.62 6.80 39.03 0.27 -0.36 16 27 C -0.14 7.58 6.15 31.13 0.19 7.77 16 28 H 0.12 -7.75 8.13 -2.39 -0.02 -7.77 16 29 H 0.12 -7.86 8.14 -2.39 -0.02 -7.88 16 30 H 0.12 -7.75 8.00 -2.39 -0.02 -7.77 16 31 H 0.12 -7.62 8.14 -2.39 -0.02 -7.64 16 32 H 0.12 -7.14 7.13 -2.39 -0.02 -7.16 16 33 H 0.13 -7.89 8.14 -2.39 -0.02 -7.91 16 34 H 0.11 -6.01 7.69 -2.39 -0.02 -6.02 16 35 H 0.11 -6.03 8.14 -2.39 -0.02 -6.05 16 36 H 0.05 -1.36 8.14 -2.39 -0.02 -1.38 16 37 H 0.06 -2.18 7.84 -2.39 -0.02 -2.20 16 38 H 0.42 -17.58 8.47 -92.71 -0.79 -18.37 16 39 H 0.17 -5.78 8.12 -2.38 -0.02 -5.80 16 40 H 0.15 -4.47 8.14 -2.38 -0.02 -4.49 16 41 H 0.20 -3.80 6.30 -2.91 -0.02 -3.82 16 42 H 0.07 -0.69 7.96 -2.39 -0.02 -0.71 16 43 H 0.39 -4.80 8.74 -74.05 -0.65 -5.45 16 44 H -0.28 2.99 7.04 99.48 0.70 3.69 16 45 H -0.29 2.50 7.11 99.48 0.71 3.21 16 46 H 0.12 -0.33 8.06 -2.91 -0.02 -0.35 16 47 H 0.13 -1.14 8.06 -2.91 -0.02 -1.17 16 48 H 0.15 -1.93 8.06 -2.91 -0.02 -1.95 16 49 H 0.14 -2.17 8.06 -2.91 -0.02 -2.20 16 50 H 0.10 -5.20 8.14 -2.39 -0.02 -5.22 16 51 H 0.11 -5.81 8.00 -2.39 -0.02 -5.83 16 Total: 1.00 -94.19 412.44 1.14 -93.06 By element: Atomic # 1 Polarization: -155.91 SS G_CDS: -1.20 Total: -157.11 kcal Atomic # 6 Polarization: 11.46 SS G_CDS: 6.51 Total: 17.97 kcal Atomic # 7 Polarization: 54.20 SS G_CDS: -4.32 Total: 49.88 kcal Atomic # 8 Polarization: 7.17 SS G_CDS: -1.97 Total: 5.21 kcal Atomic # 14 Polarization: -11.12 SS G_CDS: 2.11 Total: -9.00 kcal Total: -94.19 1.14 -93.06 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11760412_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 228.489 kcal (2) G-P(sol) polarization free energy of solvation -94.192 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 134.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.056 kcal (6) G-S(sol) free energy of system = (1) + (5) 135.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds