Wall clock time and date at job start Sat Mar 6 2021 20:48:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42906 * 109.47316 * 2 1 4 4 C 1.42898 * 113.99576 * 180.02562 * 3 2 1 5 5 H 1.08993 * 112.85430 * 341.19621 * 4 3 2 6 6 C 1.53784 * 113.61570 * 112.50456 * 4 3 2 7 7 C 1.53778 * 87.08069 * 139.97420 * 6 4 3 8 8 H 1.08999 * 113.68830 * 220.00552 * 7 6 4 9 9 N 1.46500 * 113.61406 * 89.11913 * 7 6 4 10 10 C 1.34777 * 120.00075 * 107.49715 * 9 7 6 11 11 O 1.21593 * 120.00255 * 0.02562 * 10 9 7 12 12 C 1.47564 * 119.99806 * 180.02562 * 10 9 7 13 13 C 1.39832 * 119.99702 * 179.97438 * 12 10 9 14 14 C 1.36570 * 119.99525 * 179.74427 * 13 12 10 15 15 C 1.39815 * 119.99954 * 0.25927 * 14 13 12 16 16 C 1.47566 * 119.99637 * 180.02562 * 15 14 13 17 17 C 1.34977 * 125.27519 * 179.97438 * 16 15 14 18 18 C 1.37802 * 114.70100 * 179.97438 * 17 16 15 19 19 C 1.33736 * 115.07735 * 0.02562 * 18 17 16 20 20 C 1.50701 * 125.11427 * 179.97438 * 19 18 17 21 21 O 1.42901 * 109.47364 * 300.00038 * 20 19 18 22 22 Si 1.86306 * 109.47112 * 180.02562 * 20 19 18 23 23 S 1.75857 * 109.76499 * 359.77316 * 19 18 17 24 24 C 1.39828 * 120.00691 * 359.97438 * 15 14 13 25 25 C 1.36565 * 119.99715 * 0.02562 * 24 15 14 26 26 C 1.53778 * 87.08520 * 334.56554 * 7 6 4 27 27 H 1.09003 * 109.46765 * 59.99430 * 1 2 3 28 28 H 1.08994 * 109.47310 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.46849 * 300.00031 * 1 2 3 30 30 H 1.09000 * 109.46849 * 239.99969 * 2 1 3 31 31 H 1.09000 * 109.47459 * 119.99960 * 2 1 3 32 32 H 1.08999 * 113.61129 * 25.42726 * 6 4 3 33 33 H 1.08995 * 113.61412 * 254.53003 * 6 4 3 34 34 H 0.97000 * 120.00039 * 287.50668 * 9 7 6 35 35 H 1.08002 * 120.00604 * 0.03039 * 13 12 10 36 36 H 1.07999 * 119.99944 * 180.27811 * 14 13 12 37 37 H 1.08003 * 122.65078 * 359.94372 * 17 16 15 38 38 H 1.08003 * 122.45932 * 179.97438 * 18 17 16 39 39 H 1.09008 * 109.47220 * 60.00261 * 20 19 18 40 40 H 0.96696 * 113.99998 * 300.00135 * 21 20 19 41 41 H 1.48503 * 109.99751 * 58.68223 * 22 20 19 42 42 H 1.48501 * 110.00050 * 180.02562 * 22 20 19 43 43 H 1.07991 * 119.99782 * 179.97438 * 24 15 14 44 44 H 1.07995 * 119.99582 * 180.02562 * 25 24 15 45 45 H 1.09008 * 113.61137 * 139.97471 * 26 7 6 46 46 H 1.08994 * 113.61545 * 270.88439 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4600 -0.0006 5 1 3.9280 0.5455 0.3228 6 6 4.0020 2.0464 -1.3025 7 6 4.9897 2.8313 -0.4232 8 1 5.1626 3.8524 -0.7630 9 7 6.2320 2.1063 -0.1452 10 6 7.3808 2.4852 -0.7394 11 8 7.3863 3.4291 -1.5060 12 6 8.6320 1.7545 -0.4598 13 6 9.8238 2.1473 -1.0768 14 6 10.9827 1.4743 -0.8139 15 6 10.9765 0.3893 0.0678 16 6 12.2289 -0.3375 0.3522 17 6 12.3449 -1.3952 1.1826 18 6 13.6197 -1.9081 1.2871 19 6 14.5449 -1.2813 0.5525 20 6 16.0046 -1.6516 0.4969 21 8 16.5724 -1.5485 1.8042 22 14 16.8954 -0.4937 -0.6593 23 16 13.8006 0.0364 -0.3431 24 6 9.7838 -0.0066 0.6810 25 6 8.6249 0.6663 0.4182 26 6 3.9490 2.7251 0.7039 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 3.2980 2.6806 -1.8413 33 1 4.4806 1.3050 -1.9422 34 1 6.2277 1.3534 0.4665 35 1 9.8287 2.9857 -1.7576 36 1 11.9041 1.7804 -1.2870 37 1 11.5052 -1.8068 1.7229 38 1 13.8545 -2.7536 1.9167 39 1 16.1064 -2.6752 0.1362 40 1 16.5171 -0.6628 2.1883 41 1 16.7374 0.9081 -0.1955 42 1 18.3359 -0.8488 -0.7235 43 1 9.7790 -0.8450 1.3617 44 1 7.7038 0.3608 0.8922 45 1 4.3851 2.5314 1.6840 46 1 3.2306 3.5447 0.7135 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11974784_13308390.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:55 Heat of formation + Delta-G solvation = -23.832757 kcal Electronic energy + Delta-G solvation = -27823.486966 eV Core-core repulsion = 23772.288943 eV Total energy + Delta-G solvation = -4051.198023 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.64710 -40.58893 -39.62848 -39.01116 -37.61302 -37.43635 -34.48462 -33.33869 -32.31070 -31.75210 -30.48845 -27.43153 -26.84326 -25.63659 -24.58336 -23.99920 -23.77397 -23.43213 -21.88419 -20.67905 -20.34564 -19.26809 -18.76974 -18.02351 -17.72719 -17.01545 -16.76534 -16.62530 -16.45177 -16.36561 -16.24222 -16.04665 -15.76448 -15.53221 -15.06435 -14.69417 -14.52840 -14.37749 -14.18815 -13.96316 -13.86115 -13.80085 -13.67313 -13.56629 -13.31665 -13.16187 -12.95937 -12.71617 -12.58874 -12.37402 -12.17483 -12.14433 -11.84952 -11.58633 -11.54144 -11.01094 -10.90732 -10.68147 -10.45453 -10.26525 -10.14980 -9.60681 -9.08671 -5.14196 -0.93824 0.20425 0.27262 0.33218 0.70068 1.14499 1.49751 1.52473 1.83434 1.95613 1.96622 2.67699 2.78905 3.19799 3.33740 3.37779 3.46919 3.55984 3.61260 3.65904 3.73616 3.77994 3.80684 4.09211 4.10051 4.22050 4.22836 4.30487 4.33508 4.38692 4.41949 4.46181 4.53563 4.68482 4.72888 4.73613 4.81814 4.83215 4.88810 4.92357 4.95687 4.97959 5.03474 5.16408 5.18479 5.21263 5.24017 5.39971 5.44872 5.66082 6.23221 6.24459 6.36689 7.12830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.373 6.373 4 C 0.062 3.938 5 H 0.085 0.915 6 C -0.166 4.166 7 C 0.121 3.879 8 H 0.114 0.886 9 N -0.712 5.712 10 C 0.563 3.437 11 O -0.529 6.529 12 C -0.137 4.137 13 C -0.048 4.048 14 C -0.120 4.120 15 C 0.014 3.986 16 C -0.149 4.149 17 C -0.119 4.119 18 C -0.104 4.104 19 C -0.217 4.217 20 C -0.033 4.033 21 O -0.523 6.523 22 Si 0.648 3.352 23 S 0.135 5.865 24 C -0.110 4.110 25 C -0.078 4.078 26 C -0.142 4.142 27 H 0.064 0.936 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.048 0.952 31 H 0.048 0.952 32 H 0.102 0.898 33 H 0.074 0.926 34 H 0.400 0.600 35 H 0.142 0.858 36 H 0.131 0.869 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.128 0.872 40 H 0.378 0.622 41 H -0.240 1.240 42 H -0.234 1.234 43 H 0.134 0.866 44 H 0.129 0.871 45 H 0.079 0.921 46 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.097 -3.853 1.182 4.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.004 3.996 5 H 0.103 0.897 6 C -0.205 4.205 7 C 0.015 3.985 8 H 0.132 0.868 9 N -0.363 5.363 10 C 0.351 3.649 11 O -0.406 6.406 12 C -0.140 4.140 13 C -0.067 4.067 14 C -0.139 4.139 15 C 0.012 3.988 16 C -0.266 4.266 17 C -0.149 4.149 18 C -0.135 4.135 19 C -0.334 4.334 20 C -0.145 4.145 21 O -0.330 6.330 22 Si 0.547 3.453 23 S 0.402 5.598 24 C -0.130 4.130 25 C -0.097 4.097 26 C -0.180 4.180 27 H 0.083 0.917 28 H 0.090 0.910 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.066 0.934 32 H 0.120 0.880 33 H 0.092 0.908 34 H 0.235 0.765 35 H 0.160 0.840 36 H 0.149 0.851 37 H 0.162 0.838 38 H 0.163 0.837 39 H 0.146 0.854 40 H 0.226 0.774 41 H -0.164 1.164 42 H -0.157 1.157 43 H 0.152 0.848 44 H 0.147 0.853 45 H 0.097 0.903 46 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 0.122 -1.943 -0.591 2.035 hybrid contribution -0.473 -1.507 2.464 2.927 sum -0.350 -3.450 1.873 3.942 Atomic orbital electron populations 1.21759 0.93537 1.02475 1.03278 1.22540 0.95872 0.83702 1.00003 1.87974 1.20168 1.26532 1.94535 1.23766 0.81636 0.97609 0.96616 0.89736 1.23986 0.98348 1.00673 0.97475 1.21657 0.82457 0.97593 0.96784 0.86845 1.45608 1.07567 1.35138 1.48025 1.18210 0.83234 0.83439 0.80038 1.90817 1.86124 1.28295 1.35358 1.19985 0.94031 0.98448 1.01540 1.20956 0.90531 0.98432 0.96740 1.20984 0.98852 0.95504 0.98513 1.18300 0.90653 0.94063 0.95804 1.23090 0.96563 1.02041 1.04889 1.20389 0.98392 0.96189 0.99976 1.20002 0.91414 1.01481 1.00559 1.25043 1.00732 1.02045 1.05622 1.24379 0.89461 1.09412 0.91261 1.86628 1.80979 1.35663 1.29718 0.95227 0.84162 0.78714 0.87213 1.84173 0.99243 1.31226 1.45135 1.20867 0.91192 1.00586 1.00324 1.20944 0.98451 0.94088 0.96228 1.23630 0.97395 0.98936 0.98060 0.91733 0.90981 0.91769 0.93327 0.93359 0.87959 0.90758 0.76466 0.83987 0.85088 0.83772 0.83650 0.85423 0.77391 1.16378 1.15689 0.84802 0.85318 0.90264 0.87419 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 10.28 37.16 0.38 0.51 16 2 C 0.06 -0.03 6.50 37.16 0.24 0.21 16 3 O -0.37 -0.48 10.35 -35.23 -0.36 -0.84 16 4 C 0.06 -0.05 4.19 -25.91 -0.11 -0.16 16 5 H 0.08 -0.21 7.87 -51.93 -0.41 -0.61 16 6 C -0.17 0.04 7.71 -25.92 -0.20 -0.16 16 7 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 8 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 9 N -0.71 0.49 5.21 -54.05 -0.28 0.21 16 10 C 0.56 1.19 7.76 -12.46 -0.10 1.10 16 11 O -0.53 -3.13 15.93 5.28 0.08 -3.05 16 12 C -0.14 -0.09 5.88 -104.90 -0.62 -0.71 16 13 C -0.05 -0.05 9.53 -39.59 -0.38 -0.43 16 14 C -0.12 -0.03 9.54 -39.59 -0.38 -0.41 16 15 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 16 C -0.15 -0.01 6.37 -36.94 -0.24 -0.25 16 17 C -0.12 0.07 9.64 -40.90 -0.39 -0.32 16 18 C -0.10 0.04 10.00 -41.32 -0.41 -0.38 16 19 C -0.22 0.08 5.73 -35.89 -0.21 -0.13 16 20 C -0.03 0.03 2.96 36.01 0.11 0.13 16 21 O -0.52 -0.25 12.86 -35.23 -0.45 -0.70 16 22 Si 0.65 -0.70 30.96 -169.99 -5.26 -5.96 16 23 S 0.13 -0.05 19.46 -107.50 -2.09 -2.14 16 24 C -0.11 0.14 9.48 -39.59 -0.38 -0.23 16 25 C -0.08 0.12 9.48 -39.59 -0.38 -0.25 16 26 C -0.14 0.19 7.66 -25.92 -0.20 -0.01 16 27 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 29 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.10 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.40 -1.36 6.71 -40.82 -0.27 -1.63 16 35 H 0.14 0.15 7.64 -52.49 -0.40 -0.25 16 36 H 0.13 -0.13 7.26 -52.49 -0.38 -0.51 16 37 H 0.14 -0.37 6.88 -52.48 -0.36 -0.73 16 38 H 0.15 -0.17 8.06 -52.48 -0.42 -0.59 16 39 H 0.13 -0.22 7.96 -51.92 -0.41 -0.64 16 40 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 41 H -0.24 -0.19 7.11 56.52 0.40 0.21 16 42 H -0.23 -0.37 7.11 56.52 0.40 0.03 16 43 H 0.13 -0.45 6.74 -52.49 -0.35 -0.80 16 44 H 0.13 -0.58 6.38 -52.49 -0.34 -0.91 16 45 H 0.08 -0.18 8.14 -51.92 -0.42 -0.61 16 46 H 0.11 -0.10 8.14 -51.93 -0.42 -0.53 16 LS Contribution 396.83 15.07 5.98 5.98 Total: 0.00 -7.52 396.83 -12.88 -20.41 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -6.34 Total: -11.49 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.15 Total: -2.40 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -0.28 Total: 0.21 kcal Atomic # 8 Polarization: -3.86 SS G_CDS: -0.73 Total: -4.60 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.26 Total: -5.96 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.09 Total: -2.14 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -7.52 -12.88 -20.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11974784_13308390.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.427 kcal (2) G-P(sol) polarization free energy of solvation -7.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.405 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds