Wall clock time and date at job start Sat Mar 6 2021 20:50:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42899 * 109.47023 * 2 1 4 4 C 1.42907 * 113.99727 * 179.97438 * 3 2 1 5 5 H 1.08998 * 112.84721 * 18.79933 * 4 3 2 6 6 C 1.53778 * 113.61072 * 149.99531 * 4 3 2 7 7 C 1.53784 * 87.08343 * 89.11719 * 6 4 3 8 8 H 1.09000 * 113.61503 * 270.80175 * 7 6 4 9 9 N 1.46499 * 113.61758 * 139.97754 * 7 6 4 10 10 C 1.34777 * 119.99665 * 156.80808 * 9 7 6 11 11 O 1.21283 * 119.99990 * 359.71991 * 10 9 7 12 12 C 1.50698 * 119.99538 * 179.72653 * 10 9 7 13 13 O 1.42908 * 109.46887 * 180.02562 * 12 10 9 14 14 C 1.35921 * 116.99673 * 179.97438 * 13 12 10 15 15 C 1.38794 * 120.05491 * 179.97438 * 14 13 12 16 16 Br 1.89097 * 120.03659 * 0.02562 * 15 14 13 17 17 C 1.38233 * 119.92521 * 180.02562 * 15 14 13 18 18 C 1.38237 * 120.04884 * 0.02562 * 17 15 14 19 19 C 1.50696 * 119.94279 * 180.02562 * 18 17 15 20 20 O 1.42898 * 109.47542 * 64.99383 * 19 18 17 21 21 Si 1.86304 * 109.47375 * 184.99692 * 19 18 17 22 22 C 1.38284 * 120.11648 * 359.97200 * 18 17 15 23 23 C 1.38142 * 120.07227 * 359.77582 * 22 18 17 24 24 C 1.53790 * 87.17067 * 25.38813 * 7 6 4 25 25 H 1.08997 * 109.47434 * 300.00564 * 1 2 3 26 26 H 1.08998 * 109.47151 * 60.00247 * 1 2 3 27 27 H 1.08999 * 109.47610 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47434 * 239.99436 * 2 1 3 29 29 H 1.08999 * 109.46654 * 119.99570 * 2 1 3 30 30 H 1.09000 * 113.62078 * 334.56686 * 6 4 3 31 31 H 1.09009 * 113.68675 * 203.67192 * 6 4 3 32 32 H 0.97001 * 119.99790 * 336.52521 * 9 7 6 33 33 H 1.09003 * 109.47112 * 299.99065 * 12 10 9 34 34 H 1.08993 * 109.47916 * 59.99687 * 12 10 9 35 35 H 1.08008 * 119.97471 * 179.97438 * 17 15 14 36 36 H 1.09005 * 109.47030 * 304.99248 * 19 18 17 37 37 H 0.96699 * 114.00108 * 180.02562 * 20 19 18 38 38 H 1.48500 * 110.00013 * 299.99865 * 21 19 18 39 39 H 1.48505 * 109.99916 * 61.31674 * 21 19 18 40 40 H 1.08006 * 119.96171 * 180.02562 * 22 18 17 41 41 H 1.08003 * 120.02381 * 180.24865 * 23 22 18 42 42 H 1.08994 * 113.61490 * 89.16116 * 24 7 6 43 43 H 1.09000 * 113.61241 * 220.06259 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.4309 1.4601 0.0006 5 1 3.9280 0.5455 -0.3228 6 6 3.9489 2.7250 -0.7040 7 6 3.8391 3.4328 0.6568 8 1 2.8646 3.8873 0.8352 9 7 4.9515 4.3444 0.9357 10 6 4.7911 5.3546 1.8132 11 8 3.7242 5.5122 2.3682 12 6 5.9373 6.2886 2.1047 13 8 5.5230 7.2676 3.0598 14 6 6.4455 8.1927 3.4349 15 6 6.1108 9.1732 4.3585 16 35 4.3709 9.2233 5.0973 17 6 7.0509 10.1130 4.7376 18 6 8.3228 10.0769 4.1973 19 6 9.3459 11.1023 4.6127 20 8 9.6520 10.9356 5.9985 21 14 10.8955 10.8780 3.6031 22 6 8.6582 9.1008 3.2770 23 6 7.7242 8.1560 2.8985 24 6 4.0006 2.0474 1.3047 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 1.8934 -0.5139 -0.8899 29 1 1.8932 -0.5138 0.8900 30 1 3.2647 3.1170 -1.4565 31 1 4.9724 2.6354 -1.0682 32 1 5.8048 4.2183 0.4918 33 1 6.7755 5.7202 2.5079 34 1 6.2444 6.7854 1.1845 35 1 6.7912 10.8766 5.4560 36 1 8.9459 12.1027 4.4468 37 1 10.3053 11.5639 6.3355 38 1 11.4509 9.5180 3.8204 39 1 10.5969 11.0805 2.1625 40 1 9.6528 9.0747 2.8567 41 1 7.9882 7.3916 2.1827 42 1 5.0382 1.7710 1.4913 43 1 3.3579 1.8932 2.1715 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11974784_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:25 Heat of formation + Delta-G solvation = -81.526481 kcal Electronic energy + Delta-G solvation = -26424.852117 eV Core-core repulsion = 22291.942046 eV Total energy + Delta-G solvation = -4132.910071 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.061 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.83516 -41.17789 -40.05463 -39.04710 -37.46949 -37.23272 -34.50365 -33.75754 -32.15255 -31.76583 -30.65727 -29.73558 -26.81285 -26.45411 -25.37191 -24.00935 -23.80521 -22.38535 -21.78279 -20.96576 -19.73840 -18.59522 -18.34195 -18.01173 -17.60979 -17.43268 -17.03343 -16.75942 -16.57256 -16.15054 -15.93985 -15.68375 -15.54089 -15.19548 -14.72356 -14.48425 -14.28874 -14.10777 -14.00227 -13.90118 -13.63545 -13.59711 -13.50974 -12.85844 -12.69159 -12.64208 -12.37061 -12.31428 -12.19468 -12.02013 -11.92288 -11.86380 -11.47062 -11.30033 -11.04741 -10.50523 -10.30592 -10.18632 -10.10170 -9.44319 -4.89851 -0.23374 -0.01836 0.51578 1.31561 1.33417 1.36346 1.68585 1.96511 2.22330 2.43150 2.56481 3.29506 3.37727 3.42924 3.53383 3.54191 3.62199 3.75789 3.84135 3.92876 3.95703 3.97857 4.02389 4.14095 4.18873 4.21177 4.35500 4.42591 4.45152 4.52618 4.64650 4.70119 4.72164 4.78936 4.79920 4.89415 4.95112 4.99737 5.02396 5.08166 5.21556 5.31852 5.40471 5.92383 6.27185 6.39557 6.91842 7.08205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.053 3.947 3 O -0.395 6.395 4 C 0.062 3.938 5 H 0.105 0.895 6 C -0.130 4.130 7 C 0.123 3.877 8 H 0.080 0.920 9 N -0.698 5.698 10 C 0.511 3.489 11 O -0.570 6.570 12 C 0.032 3.968 13 O -0.302 6.302 14 C 0.149 3.851 15 C -0.141 4.141 16 Br -0.044 7.044 17 C -0.030 4.030 18 C -0.120 4.120 19 C -0.081 4.081 20 O -0.566 6.566 21 Si 0.776 3.224 22 C -0.076 4.076 23 C -0.190 4.190 24 C -0.168 4.168 25 H 0.051 0.949 26 H 0.058 0.942 27 H 0.089 0.911 28 H 0.065 0.935 29 H 0.055 0.945 30 H 0.077 0.923 31 H 0.133 0.867 32 H 0.423 0.577 33 H 0.130 0.870 34 H 0.131 0.869 35 H 0.148 0.852 36 H 0.093 0.907 37 H 0.404 0.596 38 H -0.288 1.288 39 H -0.282 1.282 40 H 0.140 0.860 41 H 0.177 0.823 42 H 0.117 0.883 43 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.129 -1.493 -5.393 11.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.023 4.023 3 O -0.315 6.315 4 C 0.003 3.997 5 H 0.123 0.877 6 C -0.168 4.168 7 C 0.018 3.982 8 H 0.099 0.901 9 N -0.352 5.352 10 C 0.297 3.703 11 O -0.448 6.448 12 C -0.046 4.046 13 O -0.215 6.215 14 C 0.101 3.899 15 C -0.221 4.221 16 Br 0.041 6.959 17 C -0.050 4.050 18 C -0.121 4.121 19 C -0.190 4.190 20 O -0.376 6.376 21 Si 0.681 3.319 22 C -0.094 4.094 23 C -0.209 4.209 24 C -0.207 4.207 25 H 0.070 0.930 26 H 0.077 0.923 27 H 0.107 0.893 28 H 0.083 0.917 29 H 0.073 0.927 30 H 0.096 0.904 31 H 0.151 0.849 32 H 0.262 0.738 33 H 0.148 0.852 34 H 0.149 0.851 35 H 0.166 0.834 36 H 0.111 0.889 37 H 0.255 0.745 38 H -0.215 1.215 39 H -0.208 1.208 40 H 0.157 0.843 41 H 0.194 0.806 42 H 0.135 0.865 43 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 8.325 -2.146 -5.344 10.122 hybrid contribution -0.168 -0.367 -0.031 0.405 sum 8.157 -2.513 -5.375 10.087 Atomic orbital electron populations 1.21790 0.93679 1.03288 1.02419 1.22691 0.95799 0.82755 1.01098 1.87895 1.20865 1.28101 1.94656 1.23000 0.81327 0.99164 0.96179 0.87746 1.23616 1.03919 0.93865 0.95414 1.22435 0.90349 0.88123 0.97312 0.90148 1.45664 1.16651 1.28973 1.43875 1.20544 0.88853 0.81642 0.79243 1.90792 1.29759 1.73035 1.51217 1.22881 0.96545 0.90212 0.94919 1.86259 1.37258 1.39372 1.58567 1.18742 0.88956 0.88758 0.93455 1.21335 0.94375 1.01713 1.04709 1.96761 1.17350 1.98573 1.83209 1.20957 0.91090 0.96118 0.96834 1.19656 0.94618 0.98592 0.99211 1.24892 1.05262 0.99068 0.89814 1.86452 1.66386 1.61917 1.22860 0.94015 0.79467 0.82534 0.75917 1.21082 0.99246 0.93081 0.95946 1.21459 0.91178 1.03286 1.04956 1.24043 1.02891 0.95664 0.98071 0.92988 0.92284 0.89274 0.91664 0.92711 0.90438 0.84885 0.73792 0.85227 0.85105 0.83426 0.88908 0.74473 1.21529 1.20844 0.84297 0.80577 0.86514 0.92669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.03 10.28 71.98 0.74 0.71 16 2 C 0.05 0.00 6.50 71.98 0.47 0.47 16 3 O -0.40 -1.77 10.27 -148.98 -1.53 -3.30 16 4 C 0.06 -0.11 4.38 31.18 0.14 0.03 16 5 H 0.10 -0.66 7.87 -2.39 -0.02 -0.68 16 6 C -0.13 0.59 7.66 31.12 0.24 0.82 16 7 C 0.12 0.14 4.14 45.52 0.19 0.33 16 8 H 0.08 0.79 7.50 -2.39 -0.02 0.78 16 9 N -0.70 2.03 5.36 -440.02 -2.36 -0.33 16 10 C 0.51 2.39 7.91 87.66 0.69 3.08 16 11 O -0.57 -9.99 16.12 16.00 0.26 -9.73 16 12 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 13 O -0.30 -2.43 9.01 -73.62 -0.66 -3.10 16 14 C 0.15 0.95 6.68 22.52 0.15 1.10 16 15 C -0.14 -1.27 6.24 22.40 0.14 -1.13 16 16 Br -0.04 -0.51 33.16 -20.37 -0.68 -1.18 16 17 C -0.03 -0.19 9.42 22.27 0.21 0.02 16 18 C -0.12 -0.43 5.38 -19.86 -0.11 -0.53 16 19 C -0.08 0.17 2.79 71.23 0.20 0.37 16 20 O -0.57 0.64 12.81 -148.98 -1.91 -1.27 16 21 Si 0.78 -3.93 29.85 68.60 2.05 -1.89 16 22 C -0.08 -0.13 8.66 22.26 0.19 0.06 16 23 C -0.19 -0.07 9.04 22.36 0.20 0.13 16 24 C -0.17 0.10 7.72 31.18 0.24 0.34 16 25 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 26 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 27 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 28 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 29 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 30 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 31 H 0.13 -1.53 8.11 -2.38 -0.02 -1.55 16 32 H 0.42 -5.10 8.71 -92.71 -0.81 -5.90 16 33 H 0.13 -1.15 7.65 -2.39 -0.02 -1.17 16 34 H 0.13 -1.19 7.67 -2.39 -0.02 -1.20 16 35 H 0.15 0.65 8.06 -2.91 -0.02 0.63 16 36 H 0.09 -0.52 7.96 -2.38 -0.02 -0.54 16 37 H 0.40 -4.71 8.74 -74.06 -0.65 -5.36 16 38 H -0.29 -0.34 7.05 99.48 0.70 0.36 16 39 H -0.28 0.13 7.11 99.48 0.71 0.84 16 40 H 0.14 -0.16 4.86 -2.91 -0.01 -0.17 16 41 H 0.18 -1.42 6.30 -2.91 -0.02 -1.44 16 42 H 0.12 -0.65 8.14 -2.39 -0.02 -0.67 16 43 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 Total: 0.00 -30.00 381.32 -1.14 -31.14 By element: Atomic # 1 Polarization: -16.10 SS G_CDS: -0.37 Total: -16.47 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: 4.06 Total: 6.12 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -2.36 Total: -0.33 kcal Atomic # 8 Polarization: -13.55 SS G_CDS: -3.84 Total: -17.40 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.05 Total: -1.89 kcal Atomic # 35 Polarization: -0.51 SS G_CDS: -0.68 Total: -1.18 kcal Total: -30.00 -1.14 -31.14 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11974784_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.389 kcal (2) G-P(sol) polarization free energy of solvation -30.000 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.389 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.137 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.137 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds