Wall clock time and date at job start Sat Mar 6 2021 20:50:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42896 * 109.47014 * 2 1 4 4 C 1.42905 * 114.00018 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.84941 * 18.79909 * 4 3 2 6 6 C 1.53780 * 113.61529 * 149.99738 * 4 3 2 7 7 C 1.53787 * 87.07999 * 89.19977 * 6 4 3 8 8 H 1.09003 * 113.61387 * 270.80293 * 7 6 4 9 9 N 1.46499 * 113.61414 * 139.98129 * 7 6 4 10 10 C 1.34777 * 120.00008 * 156.52917 * 9 7 6 11 11 O 1.21282 * 119.99968 * 0.02562 * 10 9 7 12 12 C 1.50700 * 120.00168 * 179.97438 * 10 9 7 13 13 N 1.46493 * 109.47142 * 179.97438 * 12 10 9 14 14 C 1.36833 * 125.06434 * 264.97481 * 13 12 10 15 15 C 1.34241 * 109.94223 * 180.02562 * 14 13 12 16 16 C 1.50699 * 126.50280 * 179.97438 * 15 14 13 17 17 O 1.42901 * 109.46830 * 105.02060 * 16 15 14 18 18 Si 1.86298 * 109.46950 * 345.02498 * 16 15 14 19 19 C 1.46492 * 106.99612 * 0.23816 * 15 14 13 20 20 C 1.39596 * 134.03578 * 180.42540 * 19 15 14 21 21 C 1.36658 * 119.76120 * 179.61734 * 20 19 15 22 22 C 1.38792 * 120.53247 * 359.76106 * 21 20 19 23 23 C 1.37790 * 120.66485 * 359.97438 * 22 21 20 24 24 C 1.37695 * 125.06380 * 84.98219 * 13 12 10 25 25 C 1.53782 * 87.17159 * 25.38797 * 7 6 4 26 26 H 1.08999 * 109.47318 * 59.99824 * 1 2 3 27 27 H 1.09005 * 109.47084 * 180.02562 * 1 2 3 28 28 H 1.09007 * 109.47180 * 299.99764 * 1 2 3 29 29 H 1.08996 * 109.47025 * 239.99740 * 2 1 3 30 30 H 1.08999 * 109.47318 * 120.00176 * 2 1 3 31 31 H 1.08995 * 113.61549 * 334.65505 * 6 4 3 32 32 H 1.08994 * 113.61245 * 203.74637 * 6 4 3 33 33 H 0.97000 * 120.00027 * 336.53000 * 9 7 6 34 34 H 1.09005 * 109.47036 * 60.00040 * 12 10 9 35 35 H 1.08994 * 109.47235 * 300.00401 * 12 10 9 36 36 H 1.08007 * 125.02962 * 359.97438 * 14 13 12 37 37 H 1.08991 * 109.47351 * 225.02208 * 16 15 14 38 38 H 0.96708 * 114.00246 * 299.99864 * 17 16 15 39 39 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 40 40 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 41 41 H 1.07995 * 120.11645 * 359.35831 * 20 19 15 42 42 H 1.08001 * 119.73457 * 179.73962 * 21 20 19 43 43 H 1.08004 * 119.66623 * 180.02562 * 22 21 20 44 44 H 1.07997 * 120.10669 * 179.97438 * 23 22 21 45 45 H 1.08998 * 113.61204 * 89.16447 * 25 7 6 46 46 H 1.09001 * 113.61302 * 220.05950 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4309 1.4601 -0.0006 5 1 3.9278 0.5457 -0.3246 6 6 3.9483 2.7253 -0.7052 7 6 3.8417 3.4320 0.6565 8 1 2.8678 3.8870 0.8372 9 7 4.9553 4.3426 0.9339 10 6 4.7956 5.3557 1.8083 11 8 3.7302 5.5131 2.3660 12 6 5.9413 6.2920 2.0941 13 7 5.5172 7.2991 3.0698 14 6 5.0433 8.5444 2.7587 15 6 4.7457 9.2151 3.8829 16 6 4.1985 10.6164 3.9725 17 8 2.8107 10.5652 4.3091 18 14 4.4082 11.4711 2.3305 19 6 5.0596 8.3287 5.0061 20 6 4.9622 8.4487 6.3935 21 6 5.3411 7.4069 7.1927 22 6 5.8176 6.2282 6.6361 23 6 5.9169 6.0864 5.2691 24 6 5.5362 7.1335 4.4367 25 6 4.0035 2.0460 1.3028 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8901 29 1 1.8933 -0.5139 -0.8899 30 1 1.8934 -0.5138 0.8899 31 1 3.2628 3.1183 -1.4559 32 1 4.9710 2.6340 -1.0708 33 1 5.8075 4.2164 0.4881 34 1 6.2456 6.7862 1.1714 35 1 6.7812 5.7262 2.4971 36 1 4.9268 8.9310 1.7569 37 1 4.7387 11.1688 4.7413 38 1 2.2676 10.0873 3.6672 39 1 3.8730 12.8543 2.4059 40 1 5.8443 11.5025 1.9540 41 1 4.5926 9.3629 6.8337 42 1 5.2695 7.5018 8.2662 43 1 6.1129 5.4136 7.2809 44 1 6.2893 5.1654 4.8456 45 1 5.0414 1.7688 1.4872 46 1 3.3625 1.8915 2.1708 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11974784_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:53 Heat of formation + Delta-G solvation = -12.524179 kcal Electronic energy + Delta-G solvation = -28075.941520 eV Core-core repulsion = 24127.107997 eV Total energy + Delta-G solvation = -3948.833523 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.45658 -41.23390 -39.88073 -37.97442 -37.61338 -37.28126 -34.50501 -33.85724 -31.80877 -31.27705 -30.09501 -28.98626 -26.91149 -26.12836 -24.97966 -23.84951 -23.56624 -22.56353 -21.69428 -21.04253 -20.52268 -18.62162 -18.44517 -18.06737 -17.57601 -17.22660 -16.89334 -16.63506 -16.41131 -16.28184 -15.93852 -15.79593 -15.35950 -15.24245 -14.72159 -14.57032 -14.49383 -14.36445 -14.11756 -13.91961 -13.78873 -13.66560 -13.54656 -13.28818 -12.91810 -12.68505 -12.57614 -12.42546 -12.37414 -12.08676 -11.98785 -11.90418 -11.65362 -11.52348 -11.03362 -10.54631 -10.38935 -10.18327 -10.15761 -8.99959 -8.50160 -4.98849 0.30148 0.81877 1.41182 1.41978 1.45396 1.70319 1.75835 2.05449 2.17054 2.46006 3.13649 3.32037 3.44448 3.51059 3.52391 3.68336 3.72381 3.79117 3.83570 3.88344 3.92655 4.08110 4.11170 4.15563 4.26629 4.33235 4.37865 4.39414 4.45971 4.60164 4.66186 4.70571 4.73407 4.81783 4.82052 4.91016 4.92661 4.95846 4.99118 5.01517 5.18186 5.27522 5.37087 5.66706 5.83088 5.88585 5.92258 6.18348 6.19868 6.34731 6.39799 6.80999 7.05001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.057 3.943 3 O -0.366 6.366 4 C 0.067 3.933 5 H 0.081 0.919 6 C -0.147 4.147 7 C 0.132 3.868 8 H 0.120 0.880 9 N -0.720 5.720 10 C 0.491 3.509 11 O -0.511 6.511 12 C 0.091 3.909 13 N -0.466 5.466 14 C 0.069 3.931 15 C -0.198 4.198 16 C -0.029 4.029 17 O -0.542 6.542 18 Si 0.683 3.317 19 C -0.087 4.087 20 C -0.066 4.066 21 C -0.146 4.146 22 C -0.097 4.097 23 C -0.128 4.128 24 C 0.109 3.891 25 C -0.172 4.172 26 H 0.064 0.936 27 H 0.073 0.927 28 H 0.064 0.936 29 H 0.050 0.950 30 H 0.050 0.950 31 H 0.086 0.914 32 H 0.098 0.902 33 H 0.401 0.599 34 H 0.123 0.877 35 H 0.117 0.883 36 H 0.171 0.829 37 H 0.110 0.890 38 H 0.378 0.622 39 H -0.254 1.254 40 H -0.256 1.256 41 H 0.122 0.878 42 H 0.122 0.878 43 H 0.124 0.876 44 H 0.114 0.886 45 H 0.092 0.908 46 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.702 -5.236 -6.058 8.821 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.019 4.019 3 O -0.285 6.285 4 C 0.008 3.992 5 H 0.099 0.901 6 C -0.185 4.185 7 C 0.027 3.973 8 H 0.138 0.862 9 N -0.373 5.373 10 C 0.275 3.725 11 O -0.384 6.384 12 C -0.036 4.036 13 N -0.149 5.149 14 C -0.056 4.056 15 C -0.206 4.206 16 C -0.141 4.141 17 O -0.347 6.347 18 Si 0.584 3.416 19 C -0.091 4.091 20 C -0.084 4.084 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.148 4.148 24 C 0.005 3.995 25 C -0.211 4.211 26 H 0.083 0.917 27 H 0.092 0.908 28 H 0.083 0.917 29 H 0.069 0.931 30 H 0.068 0.932 31 H 0.105 0.895 32 H 0.116 0.884 33 H 0.236 0.764 34 H 0.141 0.859 35 H 0.135 0.865 36 H 0.188 0.812 37 H 0.127 0.873 38 H 0.225 0.775 39 H -0.179 1.179 40 H -0.181 1.181 41 H 0.140 0.860 42 H 0.140 0.860 43 H 0.142 0.858 44 H 0.132 0.868 45 H 0.111 0.889 46 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 3.447 -4.126 -5.807 7.914 hybrid contribution 0.877 -0.702 0.271 1.155 sum 4.324 -4.828 -5.535 8.523 Atomic orbital electron populations 1.21766 0.93387 1.02568 1.03367 1.22573 0.95872 0.83253 1.00218 1.87914 1.19184 1.26927 1.94514 1.22811 0.82238 0.97778 0.96336 0.90097 1.23613 1.02238 0.95448 0.97172 1.22528 0.91595 0.87988 0.95169 0.86227 1.45988 1.15905 1.30309 1.45086 1.21030 0.90134 0.81660 0.79670 1.90820 1.27327 1.71668 1.48612 1.21604 0.96351 0.90864 0.94732 1.43201 1.56043 1.11948 1.03738 1.21508 1.00661 0.84558 0.98874 1.20645 1.10675 0.97727 0.91510 1.24327 0.84215 0.95236 1.10294 1.86489 1.16667 1.78691 1.52883 0.95233 0.82974 0.82107 0.81259 1.18952 1.03659 0.93364 0.93145 1.20306 0.98000 0.98951 0.91164 1.20666 1.02259 0.93765 0.99816 1.20821 0.99323 0.97834 0.93650 1.19947 1.05170 0.96829 0.92874 1.18162 1.02610 0.96535 0.82234 1.24017 1.01972 0.96290 0.98802 0.91706 0.90847 0.91683 0.93125 0.93178 0.89530 0.88386 0.76418 0.85918 0.86534 0.81212 0.87275 0.77530 1.17900 1.18059 0.85983 0.85952 0.85755 0.86781 0.88937 0.90174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 10.28 37.16 0.38 0.50 16 2 C 0.06 -0.03 6.50 37.16 0.24 0.21 16 3 O -0.37 -0.44 10.27 -35.23 -0.36 -0.80 16 4 C 0.07 -0.08 4.38 -25.83 -0.11 -0.20 16 5 H 0.08 -0.21 7.87 -51.93 -0.41 -0.62 16 6 C -0.15 0.37 7.66 -25.92 -0.20 0.17 16 7 C 0.13 -0.10 4.15 -67.11 -0.28 -0.38 16 8 H 0.12 0.28 7.50 -51.93 -0.39 -0.11 16 9 N -0.72 1.83 5.36 -53.01 -0.28 1.55 16 10 C 0.49 0.08 7.90 -10.99 -0.09 -0.01 16 11 O -0.51 -2.78 16.04 5.56 0.09 -2.69 16 12 C 0.09 -0.21 6.48 -5.20 -0.03 -0.25 16 13 N -0.47 -0.69 2.27 -115.71 -0.26 -0.95 16 14 C 0.07 0.07 9.89 -16.73 -0.17 -0.10 16 15 C -0.20 -0.55 5.58 -102.71 -0.57 -1.12 16 16 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 17 O -0.54 -1.47 12.88 -35.23 -0.45 -1.93 16 18 Si 0.68 -0.15 30.75 -169.99 -5.23 -5.37 16 19 C -0.09 -0.41 6.35 -105.13 -0.67 -1.08 16 20 C -0.07 -0.28 10.05 -39.65 -0.40 -0.68 16 21 C -0.15 -0.46 9.97 -39.95 -0.40 -0.86 16 22 C -0.10 -0.26 10.01 -39.54 -0.40 -0.65 16 23 C -0.13 -0.38 10.00 -39.43 -0.39 -0.78 16 24 C 0.11 0.42 6.80 -83.99 -0.57 -0.15 16 25 C -0.17 0.18 7.72 -25.83 -0.20 -0.02 16 26 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 32 H 0.10 -0.47 8.11 -51.93 -0.42 -0.89 16 33 H 0.40 -2.39 8.71 -40.82 -0.36 -2.75 16 34 H 0.12 -0.71 8.12 -51.93 -0.42 -1.13 16 35 H 0.12 -0.51 8.14 -51.93 -0.42 -0.94 16 36 H 0.17 -0.45 6.34 -52.48 -0.33 -0.78 16 37 H 0.11 0.26 7.96 -51.93 -0.41 -0.16 16 38 H 0.38 -0.27 8.70 45.56 0.40 0.13 16 39 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 40 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 41 H 0.12 0.41 8.06 -52.49 -0.42 -0.02 16 42 H 0.12 0.14 8.06 -52.49 -0.42 -0.28 16 43 H 0.12 0.05 8.06 -52.48 -0.42 -0.37 16 44 H 0.11 0.12 8.06 -52.49 -0.42 -0.31 16 45 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 LS Contribution 387.39 15.07 5.84 5.84 Total: 0.00 -10.88 387.39 -11.44 -22.33 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -7.04 Total: -12.65 kcal Atomic # 6 Polarization: -1.58 SS G_CDS: -3.74 Total: -5.32 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.55 Total: 0.59 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -0.73 Total: -5.41 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.23 Total: -5.37 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -10.88 -11.44 -22.33 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11974784_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.801 kcal (2) G-P(sol) polarization free energy of solvation -10.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.524 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds