Wall clock time and date at job start Sat Mar 6 2021 20:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42896 * 109.47014 * 2 1 4 4 C 1.42905 * 114.00018 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.84941 * 18.79909 * 4 3 2 6 6 C 1.53780 * 113.61529 * 149.99738 * 4 3 2 7 7 C 1.53787 * 87.07999 * 89.19977 * 6 4 3 8 8 H 1.09003 * 113.61387 * 270.80293 * 7 6 4 9 9 N 1.46499 * 113.61414 * 139.98129 * 7 6 4 10 10 C 1.34777 * 120.00008 * 156.52917 * 9 7 6 11 11 O 1.21282 * 119.99968 * 0.02562 * 10 9 7 12 12 C 1.50700 * 120.00168 * 179.97438 * 10 9 7 13 13 N 1.46493 * 109.47142 * 179.97438 * 12 10 9 14 14 C 1.36833 * 125.06434 * 264.97481 * 13 12 10 15 15 C 1.34241 * 109.94223 * 180.02562 * 14 13 12 16 16 C 1.50699 * 126.50280 * 179.97438 * 15 14 13 17 17 O 1.42901 * 109.46830 * 105.02060 * 16 15 14 18 18 Si 1.86298 * 109.46950 * 345.02498 * 16 15 14 19 19 C 1.46492 * 106.99612 * 0.23816 * 15 14 13 20 20 C 1.39596 * 134.03578 * 180.42540 * 19 15 14 21 21 C 1.36658 * 119.76120 * 179.61734 * 20 19 15 22 22 C 1.38792 * 120.53247 * 359.76106 * 21 20 19 23 23 C 1.37790 * 120.66485 * 359.97438 * 22 21 20 24 24 C 1.37695 * 125.06380 * 84.98219 * 13 12 10 25 25 C 1.53782 * 87.17159 * 25.38797 * 7 6 4 26 26 H 1.08999 * 109.47318 * 59.99824 * 1 2 3 27 27 H 1.09005 * 109.47084 * 180.02562 * 1 2 3 28 28 H 1.09007 * 109.47180 * 299.99764 * 1 2 3 29 29 H 1.08996 * 109.47025 * 239.99740 * 2 1 3 30 30 H 1.08999 * 109.47318 * 120.00176 * 2 1 3 31 31 H 1.08995 * 113.61549 * 334.65505 * 6 4 3 32 32 H 1.08994 * 113.61245 * 203.74637 * 6 4 3 33 33 H 0.97000 * 120.00027 * 336.53000 * 9 7 6 34 34 H 1.09005 * 109.47036 * 60.00040 * 12 10 9 35 35 H 1.08994 * 109.47235 * 300.00401 * 12 10 9 36 36 H 1.08007 * 125.02962 * 359.97438 * 14 13 12 37 37 H 1.08991 * 109.47351 * 225.02208 * 16 15 14 38 38 H 0.96708 * 114.00246 * 299.99864 * 17 16 15 39 39 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 40 40 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 41 41 H 1.07995 * 120.11645 * 359.35831 * 20 19 15 42 42 H 1.08001 * 119.73457 * 179.73962 * 21 20 19 43 43 H 1.08004 * 119.66623 * 180.02562 * 22 21 20 44 44 H 1.07997 * 120.10669 * 179.97438 * 23 22 21 45 45 H 1.08998 * 113.61204 * 89.16447 * 25 7 6 46 46 H 1.09001 * 113.61302 * 220.05950 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4309 1.4601 -0.0006 5 1 3.9278 0.5457 -0.3246 6 6 3.9483 2.7253 -0.7052 7 6 3.8417 3.4320 0.6565 8 1 2.8678 3.8870 0.8372 9 7 4.9553 4.3426 0.9339 10 6 4.7956 5.3557 1.8083 11 8 3.7302 5.5131 2.3660 12 6 5.9413 6.2920 2.0941 13 7 5.5172 7.2991 3.0698 14 6 5.0433 8.5444 2.7587 15 6 4.7457 9.2151 3.8829 16 6 4.1985 10.6164 3.9725 17 8 2.8107 10.5652 4.3091 18 14 4.4082 11.4711 2.3305 19 6 5.0596 8.3287 5.0061 20 6 4.9622 8.4487 6.3935 21 6 5.3411 7.4069 7.1927 22 6 5.8176 6.2282 6.6361 23 6 5.9169 6.0864 5.2691 24 6 5.5362 7.1335 4.4367 25 6 4.0035 2.0460 1.3028 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8901 29 1 1.8933 -0.5139 -0.8899 30 1 1.8934 -0.5138 0.8899 31 1 3.2628 3.1183 -1.4559 32 1 4.9710 2.6340 -1.0708 33 1 5.8075 4.2164 0.4881 34 1 6.2456 6.7862 1.1714 35 1 6.7812 5.7262 2.4971 36 1 4.9268 8.9310 1.7569 37 1 4.7387 11.1688 4.7413 38 1 2.2676 10.0873 3.6672 39 1 3.8730 12.8543 2.4059 40 1 5.8443 11.5025 1.9540 41 1 4.5926 9.3629 6.8337 42 1 5.2695 7.5018 8.2662 43 1 6.1129 5.4136 7.2809 44 1 6.2893 5.1654 4.8456 45 1 5.0414 1.7688 1.4872 46 1 3.3625 1.8915 2.1708 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11974784_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:52 Heat of formation + Delta-G solvation = -13.560491 kcal Electronic energy + Delta-G solvation = -28075.986457 eV Core-core repulsion = 24127.107997 eV Total energy + Delta-G solvation = -3948.878461 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.53550 -41.18449 -39.87877 -38.11721 -37.69064 -37.31943 -34.49905 -33.89142 -31.78251 -31.36964 -30.24482 -29.00683 -26.76916 -26.17282 -24.95746 -23.78631 -23.71058 -22.68696 -21.68275 -20.96976 -20.61288 -18.65123 -18.39842 -18.06458 -17.63019 -17.25230 -16.87198 -16.57788 -16.47227 -16.36228 -15.98738 -15.85459 -15.43252 -15.30227 -14.86155 -14.71542 -14.47090 -14.40060 -14.08232 -14.01772 -13.71453 -13.59583 -13.48968 -13.16089 -12.80625 -12.73449 -12.64308 -12.58031 -12.31646 -12.23976 -12.12386 -11.82607 -11.81944 -11.43102 -11.08932 -10.55999 -10.47206 -10.30744 -10.09053 -9.17051 -8.63523 -4.99481 0.12738 0.61741 1.36694 1.41676 1.47790 1.68944 1.71336 1.99810 2.25495 2.59224 2.92829 3.45697 3.57215 3.58130 3.67266 3.69020 3.74147 3.82667 3.88569 4.04782 4.06087 4.15794 4.16571 4.20109 4.24050 4.29062 4.38864 4.46686 4.46744 4.54806 4.68677 4.70407 4.75418 4.77436 4.82199 4.87056 4.94899 4.97606 5.03520 5.07600 5.11674 5.23407 5.48382 5.48801 5.63995 5.71850 5.74085 6.19376 6.23437 6.29673 6.52120 6.81004 7.18974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.053 3.947 3 O -0.394 6.394 4 C 0.060 3.940 5 H 0.101 0.899 6 C -0.130 4.130 7 C 0.126 3.874 8 H 0.080 0.920 9 N -0.700 5.700 10 C 0.491 3.509 11 O -0.573 6.573 12 C 0.088 3.912 13 N -0.467 5.467 14 C 0.079 3.921 15 C -0.226 4.226 16 C -0.048 4.048 17 O -0.565 6.565 18 Si 0.795 3.205 19 C -0.119 4.119 20 C -0.092 4.092 21 C -0.154 4.154 22 C -0.109 4.109 23 C -0.133 4.133 24 C 0.090 3.910 25 C -0.168 4.168 26 H 0.059 0.941 27 H 0.088 0.912 28 H 0.051 0.949 29 H 0.064 0.936 30 H 0.053 0.947 31 H 0.077 0.923 32 H 0.132 0.868 33 H 0.422 0.578 34 H 0.167 0.833 35 H 0.143 0.857 36 H 0.209 0.791 37 H 0.092 0.908 38 H 0.390 0.610 39 H -0.301 1.301 40 H -0.273 1.273 41 H 0.116 0.884 42 H 0.136 0.864 43 H 0.146 0.854 44 H 0.133 0.867 45 H 0.115 0.885 46 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.725 -6.503 -8.454 12.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.023 4.023 3 O -0.314 6.314 4 C 0.001 3.999 5 H 0.119 0.881 6 C -0.168 4.168 7 C 0.021 3.979 8 H 0.098 0.902 9 N -0.353 5.353 10 C 0.276 3.724 11 O -0.451 6.451 12 C -0.036 4.036 13 N -0.149 5.149 14 C -0.046 4.046 15 C -0.233 4.233 16 C -0.157 4.157 17 O -0.372 6.372 18 Si 0.698 3.302 19 C -0.123 4.123 20 C -0.110 4.110 21 C -0.173 4.173 22 C -0.128 4.128 23 C -0.154 4.154 24 C -0.015 4.015 25 C -0.207 4.207 26 H 0.078 0.922 27 H 0.106 0.894 28 H 0.070 0.930 29 H 0.083 0.917 30 H 0.072 0.928 31 H 0.096 0.904 32 H 0.150 0.850 33 H 0.261 0.739 34 H 0.185 0.815 35 H 0.161 0.839 36 H 0.226 0.774 37 H 0.109 0.891 38 H 0.239 0.761 39 H -0.229 1.229 40 H -0.199 1.199 41 H 0.134 0.866 42 H 0.154 0.846 43 H 0.163 0.837 44 H 0.151 0.849 45 H 0.133 0.867 46 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 5.507 -5.458 -8.223 11.302 hybrid contribution 0.220 -0.338 1.058 1.132 sum 5.726 -5.796 -7.165 10.850 Atomic orbital electron populations 1.21791 0.93667 1.03253 1.02456 1.22677 0.95799 0.82823 1.01006 1.87889 1.20887 1.27978 1.94665 1.23021 0.81281 0.99227 0.96375 0.88115 1.23596 1.03787 0.93789 0.95589 1.22333 0.90576 0.88148 0.96874 0.90225 1.45805 1.16333 1.29035 1.44151 1.21512 0.89889 0.81988 0.78982 1.90810 1.29902 1.73346 1.51090 1.22012 0.95511 0.90264 0.95839 1.43461 1.55293 1.12680 1.03471 1.22094 0.98449 0.84147 0.99902 1.20806 1.12448 0.98271 0.91782 1.24716 0.83501 0.95400 1.12043 1.86440 1.17522 1.79066 1.54176 0.93961 0.79985 0.78054 0.78162 1.19396 1.04352 0.94777 0.93789 1.20446 0.99386 0.99366 0.91817 1.20910 1.02034 0.93844 1.00527 1.21130 0.99312 0.98195 0.94171 1.20254 1.04728 0.97336 0.93057 1.18400 1.02966 0.96440 0.83713 1.24025 1.02653 0.96151 0.97893 0.92203 0.89372 0.92969 0.91739 0.92845 0.90429 0.85024 0.73896 0.81530 0.83944 0.77431 0.89068 0.76059 1.22870 1.19923 0.86619 0.84647 0.83661 0.84871 0.86715 0.92991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 10.28 71.98 0.74 0.86 16 2 C 0.05 -0.05 6.50 71.98 0.47 0.42 16 3 O -0.39 -1.25 10.27 -148.98 -1.53 -2.78 16 4 C 0.06 -0.19 4.38 31.18 0.14 -0.05 16 5 H 0.10 -0.73 7.87 -2.39 -0.02 -0.75 16 6 C -0.13 0.84 7.66 31.12 0.24 1.08 16 7 C 0.13 -0.20 4.15 45.52 0.19 -0.01 16 8 H 0.08 0.57 7.50 -2.39 -0.02 0.55 16 9 N -0.70 4.67 5.36 -440.02 -2.36 2.31 16 10 C 0.49 -0.28 7.90 87.66 0.69 0.41 16 11 O -0.57 -6.91 16.04 -3.04 -0.05 -6.96 16 12 C 0.09 -0.64 6.48 85.63 0.56 -0.08 16 13 N -0.47 -1.00 2.27 -520.00 -1.18 -2.18 16 14 C 0.08 0.10 9.89 83.00 0.82 0.92 16 15 C -0.23 -1.52 5.58 -18.62 -0.10 -1.62 16 16 C -0.05 -0.25 3.06 71.24 0.22 -0.03 16 17 O -0.56 -4.22 12.88 -148.98 -1.92 -6.14 16 18 Si 0.79 -0.54 30.75 68.60 2.11 1.57 16 19 C -0.12 -1.36 6.35 -20.20 -0.13 -1.49 16 20 C -0.09 -1.04 10.05 22.23 0.22 -0.82 16 21 C -0.15 -1.27 9.97 22.03 0.22 -1.05 16 22 C -0.11 -0.68 10.01 22.30 0.22 -0.45 16 23 C -0.13 -0.85 10.00 22.37 0.22 -0.63 16 24 C 0.09 0.76 6.80 39.03 0.27 1.02 16 25 C -0.17 0.38 7.72 31.18 0.24 0.62 16 26 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 27 H 0.09 -0.36 8.14 -2.38 -0.02 -0.38 16 28 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 29 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 30 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 31 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 32 H 0.13 -1.74 8.11 -2.39 -0.02 -1.76 16 33 H 0.42 -6.43 8.71 -92.71 -0.81 -7.24 16 34 H 0.17 -2.67 8.12 -2.38 -0.02 -2.69 16 35 H 0.14 -1.73 8.14 -2.39 -0.02 -1.75 16 36 H 0.21 -1.63 6.34 -2.91 -0.02 -1.65 16 37 H 0.09 0.69 7.96 -2.39 -0.02 0.67 16 38 H 0.39 0.06 8.70 -74.05 -0.64 -0.59 16 39 H -0.30 -2.09 7.11 99.48 0.71 -1.38 16 40 H -0.27 -0.60 7.11 99.48 0.71 0.10 16 41 H 0.12 1.24 8.06 -2.91 -0.02 1.22 16 42 H 0.14 0.55 8.06 -2.91 -0.02 0.53 16 43 H 0.15 0.13 8.06 -2.91 -0.02 0.10 16 44 H 0.13 0.18 8.06 -2.91 -0.02 0.15 16 45 H 0.11 -0.81 8.14 -2.39 -0.02 -0.82 16 46 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 Total: 0.00 -31.15 387.39 -0.13 -31.27 By element: Atomic # 1 Polarization: -15.77 SS G_CDS: -0.42 Total: -16.19 kcal Atomic # 6 Polarization: -6.12 SS G_CDS: 5.22 Total: -0.90 kcal Atomic # 7 Polarization: 3.67 SS G_CDS: -3.54 Total: 0.13 kcal Atomic # 8 Polarization: -12.38 SS G_CDS: -3.50 Total: -15.88 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: 2.11 Total: 1.57 kcal Total: -31.15 -0.13 -31.27 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11974784_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.711 kcal (2) G-P(sol) polarization free energy of solvation -31.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.435 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.271 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.560 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds