Wall clock time and date at job start Sat Mar 6 2021 20:48:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34223 * 116.99883 * 2 1 4 4 O 1.20822 * 120.00197 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99879 * 180.02562 * 3 2 1 6 6 N 1.46498 * 109.47361 * 34.99871 * 5 3 2 7 7 C 1.34777 * 119.99852 * 300.00660 * 6 5 3 8 8 O 1.21691 * 120.00254 * 354.52736 * 7 6 5 9 9 C 1.46684 * 119.99877 * 174.53366 * 7 6 5 10 10 C 1.37875 * 126.22904 * 4.99028 * 9 7 6 11 11 C 1.39840 * 107.08245 * 180.02562 * 10 9 7 12 12 C 1.35449 * 107.86424 * 359.97438 * 11 10 9 13 13 C 1.50701 * 125.56392 * 180.02562 * 12 11 10 14 14 O 1.42907 * 109.47209 * 149.97804 * 13 12 11 15 15 Si 1.86297 * 109.47021 * 29.97930 * 13 12 11 16 16 N 1.35539 * 108.87382 * 359.73565 * 12 11 10 17 17 C 1.46494 * 125.68076 * 180.30330 * 16 12 11 18 18 C 1.53001 * 109.46892 * 275.00156 * 5 3 2 19 19 C 1.52996 * 109.47070 * 179.97438 * 18 5 3 20 20 C 1.53005 * 109.47246 * 60.00438 * 19 18 5 21 21 H 1.08993 * 109.47077 * 180.02562 * 20 19 18 22 22 C 1.52999 * 109.47069 * 59.99472 * 20 19 18 23 23 C 1.53001 * 109.46406 * 299.99973 * 20 19 18 24 24 C 1.52996 * 109.47396 * 60.00119 * 23 20 19 25 25 H 1.09003 * 109.47122 * 299.99372 * 1 2 3 26 26 H 1.09001 * 109.47241 * 59.99736 * 1 2 3 27 27 H 1.08999 * 109.47134 * 179.97438 * 1 2 3 28 28 H 0.96998 * 119.99673 * 119.99766 * 6 5 3 29 29 H 1.07996 * 126.46039 * 359.95886 * 10 9 7 30 30 H 1.08000 * 126.06674 * 179.97438 * 11 10 9 31 31 H 1.09000 * 109.47248 * 269.97780 * 13 12 11 32 32 H 0.96703 * 113.99865 * 300.00290 * 14 13 12 33 33 H 1.48503 * 110.00091 * 58.68171 * 15 13 12 34 34 H 1.48501 * 110.00161 * 180.02562 * 15 13 12 35 35 H 1.09003 * 109.47067 * 275.30700 * 17 16 12 36 36 H 1.08999 * 109.47556 * 35.30436 * 17 16 12 37 37 H 1.09004 * 109.47318 * 155.30818 * 17 16 12 38 38 H 1.08999 * 109.47315 * 59.99826 * 18 5 3 39 39 H 1.09001 * 109.46987 * 299.99977 * 18 5 3 40 40 H 1.08991 * 109.47296 * 299.99898 * 19 18 5 41 41 H 1.09008 * 109.47143 * 179.97438 * 19 18 5 42 42 H 1.08998 * 109.47312 * 60.00635 * 22 20 19 43 43 H 1.08999 * 109.46626 * 180.02562 * 22 20 19 44 44 H 1.09001 * 109.47501 * 300.00512 * 22 20 19 45 45 H 1.08999 * 109.46992 * 180.02562 * 23 20 19 46 46 H 1.09001 * 109.47509 * 299.99830 * 23 20 19 47 47 H 1.09001 * 109.47288 * 59.99900 * 24 23 20 48 48 H 1.09008 * 109.47143 * 179.97438 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1129 0.1707 -0.7932 7 6 3.8538 -1.1043 -0.4414 8 8 3.2505 -1.3406 0.5887 9 6 4.2989 -2.2070 -1.3001 10 6 5.0702 -2.0940 -2.4374 11 6 5.2545 -3.3863 -2.9388 12 6 4.6076 -4.2471 -2.1171 13 6 4.5479 -5.7433 -2.2865 14 8 4.4355 -6.3639 -1.0042 15 14 6.1006 -6.3352 -3.1289 16 7 4.0280 -3.5437 -1.1139 17 6 3.2412 -4.1111 -0.0161 18 6 4.0827 1.1756 1.4362 19 6 5.6106 1.2550 1.4356 20 6 6.0519 2.5872 0.8260 21 1 7.1403 2.6436 0.8252 22 6 5.4815 3.7407 1.6537 23 6 5.5354 2.6864 -0.6108 24 6 4.0075 2.6070 -0.6102 25 1 -0.3633 0.5137 0.8901 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 4.6613 0.3573 -1.5713 29 1 5.4578 -1.1797 -2.8616 30 1 5.8135 -3.6511 -3.8241 31 1 3.6821 -6.0059 -2.8944 32 1 5.1734 -6.1733 -0.4090 33 1 7.2905 -5.9554 -2.3258 34 1 6.0539 -7.8093 -3.3025 35 1 2.2083 -4.2418 -0.3392 36 1 3.6580 -5.0773 0.2681 37 1 3.2716 -3.4364 0.8394 38 1 3.7688 0.2264 1.8705 39 1 3.6760 1.9971 2.0260 40 1 6.0169 0.4334 0.8460 41 1 5.9785 1.1848 2.4593 42 1 5.8493 3.6700 2.6773 43 1 5.7955 4.6897 1.2191 44 1 4.3929 3.6841 1.6542 45 1 5.8501 3.6352 -1.0453 46 1 5.9417 1.8646 -1.2005 47 1 3.6012 3.4287 -0.0205 48 1 3.6395 2.6780 -1.6338 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:48 Heat of formation + Delta-G solvation = -94.033657 kcal Electronic energy + Delta-G solvation = -32018.444968 eV Core-core repulsion = 27848.309399 eV Total energy + Delta-G solvation = -4170.135569 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.73501 -42.11970 -40.31252 -39.18757 -37.95491 -37.27054 -35.58009 -33.77923 -32.44552 -32.01260 -30.79841 -28.98938 -27.81204 -27.46134 -26.70033 -24.44529 -23.97722 -23.32563 -21.82712 -21.20373 -20.52283 -19.54420 -18.89719 -18.64371 -18.24818 -17.75423 -17.24655 -16.87307 -16.71348 -16.46211 -16.03026 -15.85584 -15.53922 -15.36338 -15.00103 -14.83609 -14.74255 -14.45482 -14.33479 -14.27693 -14.04586 -13.81929 -13.73200 -13.59435 -13.32474 -13.12933 -12.99710 -12.89438 -12.72881 -12.60527 -12.34339 -12.17996 -11.94945 -11.76664 -11.61309 -11.45813 -11.33392 -11.16752 -11.01382 -10.54897 -10.17984 -9.70825 -9.06638 -4.99799 0.44868 1.08988 1.14774 1.55191 1.65439 1.70313 1.79888 1.96102 2.33314 2.49592 3.05543 3.28008 3.53549 3.54219 3.64219 3.75907 3.92383 3.98533 4.02133 4.05400 4.19617 4.26041 4.34299 4.34477 4.36066 4.39670 4.41579 4.45173 4.53371 4.53507 4.67590 4.71568 4.76002 4.81924 4.84220 4.92357 5.00626 5.02002 5.06557 5.10739 5.16224 5.21027 5.28271 5.34918 5.44236 5.51855 5.70108 5.99802 6.14149 6.20453 6.43538 6.81264 7.22492 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.327 6.327 3 C 0.458 3.542 4 O -0.506 6.506 5 C 0.204 3.796 6 N -0.712 5.712 7 C 0.595 3.405 8 O -0.513 6.513 9 C -0.047 4.047 10 C -0.139 4.139 11 C -0.197 4.197 12 C 0.011 3.989 13 C -0.055 4.055 14 O -0.532 6.532 15 Si 0.718 3.282 16 N -0.390 5.390 17 C 0.052 3.948 18 C -0.133 4.133 19 C -0.106 4.106 20 C -0.095 4.095 21 H 0.076 0.924 22 C -0.155 4.155 23 C -0.113 4.113 24 C -0.117 4.117 25 H 0.062 0.938 26 H 0.060 0.940 27 H 0.099 0.901 28 H 0.407 0.593 29 H 0.145 0.855 30 H 0.153 0.847 31 H 0.123 0.877 32 H 0.378 0.622 33 H -0.257 1.257 34 H -0.255 1.255 35 H 0.072 0.928 36 H 0.099 0.901 37 H 0.105 0.895 38 H 0.098 0.902 39 H 0.080 0.920 40 H 0.066 0.934 41 H 0.070 0.930 42 H 0.056 0.944 43 H 0.056 0.944 44 H 0.060 0.940 45 H 0.076 0.924 46 H 0.066 0.934 47 H 0.099 0.901 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.590 -0.004 -3.310 4.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.241 6.241 3 C 0.299 3.701 4 O -0.393 6.393 5 C 0.116 3.884 6 N -0.367 5.367 7 C 0.383 3.617 8 O -0.389 6.389 9 C -0.162 4.162 10 C -0.165 4.165 11 C -0.221 4.221 12 C -0.107 4.107 13 C -0.164 4.164 14 O -0.338 6.338 15 Si 0.616 3.384 16 N -0.062 5.062 17 C -0.088 4.088 18 C -0.171 4.171 19 C -0.144 4.144 20 C -0.114 4.114 21 H 0.094 0.906 22 C -0.212 4.212 23 C -0.151 4.151 24 C -0.155 4.155 25 H 0.081 0.919 26 H 0.079 0.921 27 H 0.117 0.883 28 H 0.244 0.756 29 H 0.163 0.837 30 H 0.170 0.830 31 H 0.141 0.859 32 H 0.226 0.774 33 H -0.181 1.181 34 H -0.180 1.180 35 H 0.091 0.909 36 H 0.117 0.883 37 H 0.123 0.877 38 H 0.116 0.884 39 H 0.098 0.902 40 H 0.084 0.916 41 H 0.088 0.912 42 H 0.075 0.925 43 H 0.076 0.924 44 H 0.079 0.921 45 H 0.095 0.905 46 H 0.084 0.916 47 H 0.117 0.883 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.807 -0.761 -2.429 3.789 hybrid contribution -0.225 0.247 0.761 0.831 sum 2.582 -0.514 -1.667 3.116 Atomic orbital electron populations 1.23282 0.77002 1.03643 1.02278 1.86786 1.22643 1.31994 1.82716 1.24078 0.91861 0.81962 0.72227 1.90688 1.66651 1.36536 1.45392 1.20165 0.85057 0.88386 0.94831 1.45635 1.54862 1.04129 1.32102 1.16880 0.78587 0.81733 0.84494 1.90758 1.40018 1.83630 1.24525 1.19989 1.10531 0.84210 1.01445 1.21282 1.01545 0.98275 0.95414 1.20529 1.06893 0.92189 1.02456 1.21052 1.02291 0.94593 0.92747 1.24919 1.14357 0.87138 0.90020 1.86593 1.48697 1.73997 1.24550 0.94395 0.73877 0.81030 0.89088 1.43735 1.37617 1.04612 1.20266 1.22615 0.95692 1.01361 0.89162 1.22061 0.97125 1.05157 0.92792 1.21484 0.94068 0.97297 1.01543 1.21159 1.00397 0.95189 0.94615 0.90594 1.21976 1.01527 0.97813 0.99903 1.21597 0.93647 1.02748 0.97087 1.21820 0.97243 0.94208 1.02191 0.91912 0.92140 0.88270 0.75569 0.83699 0.82995 0.85923 0.77395 1.18107 1.17957 0.90901 0.88326 0.87669 0.88398 0.90176 0.91560 0.91172 0.92521 0.92447 0.92090 0.90515 0.91578 0.88287 0.90455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.33 -1.33 6.94 -47.16 -0.33 -1.66 16 3 C 0.46 1.72 6.71 36.01 0.24 1.97 16 4 O -0.51 -2.94 15.85 -18.75 -0.30 -3.24 16 5 C 0.20 0.15 0.63 -132.97 -0.08 0.07 16 6 N -0.71 0.20 4.01 -49.98 -0.20 0.00 16 7 C 0.59 1.18 6.59 -12.85 -0.08 1.10 16 8 O -0.51 -2.16 9.99 -18.73 -0.19 -2.35 16 9 C -0.05 -0.07 6.89 -81.98 -0.56 -0.64 16 10 C -0.14 0.05 10.36 -39.12 -0.41 -0.36 16 11 C -0.20 0.13 9.37 -39.98 -0.37 -0.25 16 12 C 0.01 0.00 6.15 -81.95 -0.50 -0.50 16 13 C -0.06 0.06 2.99 36.01 0.11 0.16 16 14 O -0.53 0.08 10.10 -35.23 -0.36 -0.27 16 15 Si 0.72 -1.43 31.10 -169.99 -5.29 -6.72 16 16 N -0.39 -0.61 3.16 -115.62 -0.37 -0.97 16 17 C 0.05 0.05 10.30 59.84 0.62 0.67 16 18 C -0.13 -0.11 4.22 -26.73 -0.11 -0.22 16 19 C -0.11 0.08 5.29 -26.73 -0.14 -0.06 16 20 C -0.10 0.17 3.20 -90.62 -0.29 -0.12 16 21 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 22 C -0.16 0.20 8.50 37.16 0.32 0.52 16 23 C -0.11 0.29 5.28 -26.73 -0.14 0.15 16 24 C -0.12 0.10 4.04 -26.73 -0.11 0.00 16 25 H 0.06 0.12 8.13 -51.93 -0.42 -0.31 16 26 H 0.06 0.10 8.13 -51.93 -0.42 -0.33 16 27 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.41 -1.07 6.22 -40.82 -0.25 -1.33 16 29 H 0.15 -0.45 7.45 -52.49 -0.39 -0.84 16 30 H 0.15 -0.52 6.85 -52.49 -0.36 -0.88 16 31 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 32 H 0.38 -0.94 8.30 45.56 0.38 -0.56 16 33 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 34 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 35 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 36 H 0.10 -0.03 5.21 -51.93 -0.27 -0.30 16 37 H 0.10 0.22 5.96 -51.93 -0.31 -0.09 16 38 H 0.10 0.28 5.99 -51.93 -0.31 -0.03 16 39 H 0.08 0.07 6.43 -51.93 -0.33 -0.26 16 40 H 0.07 -0.03 7.60 -51.93 -0.39 -0.42 16 41 H 0.07 -0.04 8.14 -51.92 -0.42 -0.47 16 42 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 43 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.06 -0.04 4.81 -51.93 -0.25 -0.29 16 45 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 46 H 0.07 -0.23 6.86 -51.93 -0.36 -0.59 16 47 H 0.10 0.01 6.16 -51.93 -0.32 -0.31 16 48 H 0.08 -0.09 8.14 -51.92 -0.42 -0.51 16 LS Contribution 363.64 15.07 5.48 5.48 Total: 0.00 -7.86 363.64 -9.01 -16.88 By element: Atomic # 1 Polarization: -3.73 SS G_CDS: -7.01 Total: -10.74 kcal Atomic # 6 Polarization: 4.05 SS G_CDS: -0.46 Total: 3.59 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.57 Total: -0.97 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -1.17 Total: -7.52 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.29 Total: -6.72 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -7.86 -9.01 -16.88 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.158 kcal (2) G-P(sol) polarization free energy of solvation -7.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.876 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds