Wall clock time and date at job start Sat Mar 6 2021 20:49:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34224 * 117.00077 * 2 1 4 4 O 1.20833 * 120.00103 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00302 * 180.02562 * 3 2 1 6 6 N 1.46498 * 109.47430 * 34.99471 * 5 3 2 7 7 C 1.34780 * 120.00096 * 300.00869 * 6 5 3 8 8 O 1.21288 * 119.99951 * 359.97438 * 7 6 5 9 9 C 1.50693 * 120.00003 * 179.97438 * 7 6 5 10 10 C 1.50704 * 109.46876 * 179.97438 * 9 7 6 11 11 C 1.38241 * 119.99938 * 269.72163 * 10 9 7 12 12 C 1.38227 * 119.99765 * 179.76850 * 11 10 9 13 13 C 1.38235 * 120.00542 * 0.50740 * 12 11 10 14 14 C 1.50696 * 120.00427 * 179.72696 * 13 12 11 15 15 O 1.42897 * 109.47226 * 120.02016 * 14 13 12 16 16 Si 1.86295 * 109.47024 * 0.02562 * 14 13 12 17 17 C 1.38237 * 119.99468 * 359.74566 * 13 12 11 18 18 C 1.38230 * 120.00327 * 0.02562 * 17 13 12 19 19 C 1.53005 * 109.46770 * 274.99933 * 5 3 2 20 20 C 1.53007 * 109.47204 * 180.02562 * 19 5 3 21 21 C 1.52997 * 109.46902 * 59.99672 * 20 19 5 22 22 H 1.09004 * 109.47007 * 180.02562 * 21 20 19 23 23 C 1.52998 * 109.47325 * 60.00492 * 21 20 19 24 24 C 1.53001 * 109.47286 * 299.99667 * 21 20 19 25 25 C 1.52996 * 109.47482 * 155.00122 * 5 3 2 26 26 H 1.09001 * 109.46626 * 60.00180 * 1 2 3 27 27 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47070 * 300.00162 * 1 2 3 29 29 H 0.96995 * 120.00152 * 119.99872 * 6 5 3 30 30 H 1.09002 * 109.47104 * 299.98922 * 9 7 6 31 31 H 1.08993 * 109.47880 * 59.99576 * 9 7 6 32 32 H 1.08000 * 119.99514 * 0.02562 * 11 10 9 33 33 H 1.08002 * 119.99932 * 180.23190 * 12 11 10 34 34 H 1.09001 * 109.47068 * 240.02164 * 14 13 12 35 35 H 0.96695 * 114.00164 * 299.99889 * 15 14 13 36 36 H 1.48499 * 110.00107 * 58.68482 * 16 14 13 37 37 H 1.48505 * 109.99892 * 180.02562 * 16 14 13 38 38 H 1.08008 * 119.99711 * 179.97438 * 17 13 12 39 39 H 1.08001 * 119.99957 * 179.97438 * 18 17 13 40 40 H 1.09004 * 109.46769 * 299.99453 * 19 5 3 41 41 H 1.08991 * 109.47381 * 59.99839 * 19 5 3 42 42 H 1.09003 * 109.46828 * 300.00177 * 20 19 5 43 43 H 1.08999 * 109.47150 * 179.97438 * 20 19 5 44 44 H 1.09003 * 109.46757 * 299.99494 * 23 21 20 45 45 H 1.08999 * 109.47152 * 59.99426 * 23 21 20 46 46 H 1.09007 * 109.46800 * 179.97438 * 23 21 20 47 47 H 1.08993 * 109.47708 * 300.00947 * 24 21 20 48 48 H 1.09000 * 109.47091 * 179.97438 * 24 21 20 49 49 H 1.08999 * 109.46979 * 299.99636 * 25 5 3 50 50 H 1.08997 * 109.47375 * 59.99543 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1130 0.1707 -0.7931 7 6 3.8539 -1.1043 -0.4413 8 8 3.1684 -1.3375 0.5318 9 6 4.4157 -2.2401 -1.2569 10 6 3.9822 -3.5524 -0.6560 11 6 4.7663 -4.1661 0.3030 12 6 4.3663 -5.3674 0.8575 13 6 3.1875 -5.9604 0.4456 14 6 2.7545 -7.2732 1.0457 15 8 1.4859 -7.1102 1.6831 16 14 4.0138 -7.8271 2.3018 17 6 2.4060 -5.3493 -0.5171 18 6 2.8036 -4.1456 -1.0683 19 6 4.0827 1.1757 1.4363 20 6 5.6106 1.2565 1.4359 21 6 6.0507 2.5891 0.8265 22 1 7.1392 2.6465 0.8258 23 6 5.4794 3.7419 1.6544 24 6 5.5344 2.6881 -0.6104 25 6 4.0070 2.6072 -0.6101 26 1 -0.3632 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 4.6613 0.3572 -1.5712 30 1 4.0474 -2.1694 -2.2803 31 1 5.5042 -2.1832 -1.2577 32 1 5.6893 -3.7048 0.6218 33 1 4.9769 -5.8450 1.6094 34 1 2.6720 -8.0228 0.2588 35 1 1.4849 -6.4566 2.3957 36 1 4.1586 -6.7989 3.3635 37 1 3.5986 -9.1211 2.9006 38 1 1.4852 -5.8128 -0.8393 39 1 2.1933 -3.6685 -1.8208 40 1 3.6760 1.9974 2.0260 41 1 3.7688 0.2266 1.8705 42 1 6.0177 0.4352 0.8460 43 1 5.9785 1.1863 2.4595 44 1 4.3908 3.6844 1.6547 45 1 5.8472 3.6713 2.6780 46 1 5.7933 4.6913 1.2204 47 1 5.9413 1.8669 -1.2002 48 1 5.8475 3.6377 -1.0443 49 1 3.6391 2.6778 -1.6337 50 1 3.6003 3.4287 -0.0204 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_12335836.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:49:08 Heat of formation + Delta-G solvation = -125.306623 kcal Electronic energy + Delta-G solvation = -32708.405709 eV Core-core repulsion = 28474.113813 eV Total energy + Delta-G solvation = -4234.291896 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.182 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.42184 -40.85882 -40.22640 -39.31774 -37.67590 -37.24083 -35.44151 -34.08780 -32.07673 -31.99910 -31.86913 -29.52268 -28.92967 -27.77655 -25.78976 -24.40201 -23.98508 -23.76556 -22.57230 -21.56376 -21.15054 -19.59474 -18.70178 -18.48132 -18.34091 -17.61023 -17.28966 -17.03601 -16.84460 -16.49282 -16.29728 -16.08258 -15.81926 -15.60351 -15.11985 -15.05339 -14.78817 -14.67309 -14.47799 -14.36139 -14.10491 -13.86028 -13.74661 -13.64063 -13.36571 -13.24667 -13.11535 -12.94184 -12.79757 -12.74080 -12.62448 -12.22133 -12.17498 -11.96129 -11.76670 -11.58401 -11.54987 -11.47308 -11.34726 -11.12802 -10.64608 -10.52781 -10.13930 -9.81231 -9.57027 -4.92754 0.28472 0.51746 1.17622 1.33371 1.64748 1.64976 1.89132 2.00648 2.06671 2.80473 3.29095 3.42060 3.51227 3.59587 3.62673 3.78948 3.84340 3.89008 3.90418 4.02249 4.05134 4.06639 4.17346 4.25994 4.28656 4.32821 4.36475 4.38396 4.41346 4.50861 4.51357 4.59817 4.68524 4.69790 4.73001 4.75162 4.79391 4.89467 4.98179 5.02891 5.03333 5.07567 5.11658 5.17599 5.25282 5.33425 5.41819 5.42968 5.53871 5.59208 5.63318 6.04562 6.41302 6.45541 6.84054 7.27347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.320 6.320 3 C 0.456 3.544 4 O -0.509 6.509 5 C 0.200 3.800 6 N -0.725 5.725 7 C 0.513 3.487 8 O -0.489 6.489 9 C -0.102 4.102 10 C -0.060 4.060 11 C -0.100 4.100 12 C -0.115 4.115 13 C -0.117 4.117 14 C -0.074 4.074 15 O -0.530 6.530 16 Si 0.683 3.317 17 C -0.091 4.091 18 C -0.101 4.101 19 C -0.132 4.132 20 C -0.106 4.106 21 C -0.095 4.095 22 H 0.075 0.925 23 C -0.155 4.155 24 C -0.112 4.112 25 C -0.117 4.117 26 H 0.058 0.942 27 H 0.100 0.900 28 H 0.061 0.939 29 H 0.405 0.595 30 H 0.103 0.897 31 H 0.104 0.896 32 H 0.124 0.876 33 H 0.126 0.874 34 H 0.117 0.883 35 H 0.377 0.623 36 H -0.261 1.261 37 H -0.258 1.258 38 H 0.124 0.876 39 H 0.121 0.879 40 H 0.079 0.921 41 H 0.094 0.906 42 H 0.065 0.935 43 H 0.069 0.931 44 H 0.060 0.940 45 H 0.056 0.944 46 H 0.056 0.944 47 H 0.065 0.935 48 H 0.075 0.925 49 H 0.075 0.925 50 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.116 0.557 -3.760 7.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.234 6.234 3 C 0.297 3.703 4 O -0.396 6.396 5 C 0.112 3.888 6 N -0.382 5.382 7 C 0.299 3.701 8 O -0.361 6.361 9 C -0.141 4.141 10 C -0.060 4.060 11 C -0.118 4.118 12 C -0.132 4.132 13 C -0.118 4.118 14 C -0.184 4.184 15 O -0.337 6.337 16 Si 0.584 3.416 17 C -0.109 4.109 18 C -0.119 4.119 19 C -0.170 4.170 20 C -0.143 4.143 21 C -0.114 4.114 22 H 0.094 0.906 23 C -0.213 4.213 24 C -0.150 4.150 25 C -0.154 4.154 26 H 0.077 0.923 27 H 0.118 0.882 28 H 0.079 0.921 29 H 0.241 0.759 30 H 0.121 0.879 31 H 0.122 0.878 32 H 0.141 0.859 33 H 0.143 0.857 34 H 0.135 0.865 35 H 0.224 0.776 36 H -0.185 1.185 37 H -0.183 1.183 38 H 0.142 0.858 39 H 0.139 0.861 40 H 0.097 0.903 41 H 0.113 0.887 42 H 0.084 0.916 43 H 0.088 0.912 44 H 0.079 0.921 45 H 0.075 0.925 46 H 0.075 0.925 47 H 0.084 0.916 48 H 0.094 0.906 49 H 0.094 0.906 50 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 5.333 -0.011 -2.626 5.944 hybrid contribution -1.015 0.962 -0.011 1.399 sum 4.318 0.952 -2.637 5.149 Atomic orbital electron populations 1.23284 0.77323 1.03651 1.02116 1.86875 1.22367 1.31636 1.82566 1.24141 0.91905 0.82033 0.72227 1.90688 1.66743 1.36652 1.45528 1.20119 0.85184 0.88732 0.94790 1.46096 1.55198 1.04863 1.32024 1.20530 0.80611 0.83141 0.85855 1.90757 1.35255 1.83611 1.26516 1.20668 1.02753 0.90602 1.00109 1.19236 0.95279 0.94475 0.97037 1.20887 0.99769 0.95100 0.96004 1.20922 0.96188 0.95978 1.00123 1.20253 0.95799 0.97381 0.98329 1.25018 0.92821 0.97219 1.03362 1.86583 1.29944 1.64298 1.52838 0.95100 0.85790 0.80122 0.80570 1.20943 0.99224 0.95120 0.95629 1.20992 0.95603 0.95325 0.99996 1.22006 0.97065 1.04927 0.92976 1.21481 0.94085 0.97233 1.01510 1.21160 1.00361 0.95222 0.94630 0.90617 1.21979 1.01538 0.97822 0.99916 1.21582 0.93732 1.02650 0.97035 1.21795 0.97148 0.94423 1.02071 0.92284 0.88202 0.92062 0.75931 0.87870 0.87758 0.85851 0.85692 0.86487 0.77579 1.18538 1.18345 0.85762 0.86103 0.90257 0.88745 0.91587 0.91182 0.92090 0.92505 0.92457 0.91616 0.90635 0.90615 0.88479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.32 -1.23 6.73 -47.35 -0.32 -1.55 16 3 C 0.46 1.62 6.71 36.00 0.24 1.86 16 4 O -0.51 -2.98 15.84 -18.76 -0.30 -3.28 16 5 C 0.20 0.04 0.63 -132.97 -0.08 -0.05 16 6 N -0.73 1.31 4.03 -48.69 -0.20 1.11 16 7 C 0.51 -0.05 6.76 -10.99 -0.07 -0.13 16 8 O -0.49 -1.78 11.28 -18.95 -0.21 -1.99 16 9 C -0.10 0.25 5.83 -29.04 -0.17 0.08 16 10 C -0.06 0.00 4.37 -104.62 -0.46 -0.46 16 11 C -0.10 -0.01 9.70 -39.58 -0.38 -0.39 16 12 C -0.11 -0.04 8.67 -39.59 -0.34 -0.38 16 13 C -0.12 -0.11 5.39 -104.62 -0.56 -0.67 16 14 C -0.07 -0.04 2.82 36.00 0.10 0.06 16 15 O -0.53 -1.17 12.77 -35.23 -0.45 -1.62 16 16 Si 0.68 -0.18 29.79 -169.99 -5.06 -5.24 16 17 C -0.09 -0.12 9.61 -39.58 -0.38 -0.50 16 18 C -0.10 -0.07 9.70 -39.58 -0.38 -0.46 16 19 C -0.13 -0.06 4.23 -26.72 -0.11 -0.17 16 20 C -0.11 0.15 5.29 -26.73 -0.14 0.01 16 21 C -0.10 0.21 3.19 -90.62 -0.29 -0.08 16 22 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 23 C -0.16 0.23 8.50 37.16 0.32 0.54 16 24 C -0.11 0.34 5.28 -26.75 -0.14 0.20 16 25 C -0.12 0.14 4.03 -26.76 -0.11 0.03 16 26 H 0.06 0.09 8.13 -51.93 -0.42 -0.33 16 27 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 29 H 0.40 -1.85 7.32 -40.82 -0.30 -2.15 16 30 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 31 H 0.10 -0.49 8.08 -51.93 -0.42 -0.91 16 32 H 0.12 -0.21 8.06 -52.49 -0.42 -0.64 16 33 H 0.13 -0.16 4.88 -52.49 -0.26 -0.42 16 34 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 35 H 0.38 -0.08 8.70 45.56 0.40 0.32 16 36 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 37 H -0.26 -0.78 7.11 56.52 0.40 -0.37 16 38 H 0.12 0.11 8.06 -52.48 -0.42 -0.31 16 39 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 40 H 0.08 0.07 6.43 -51.93 -0.33 -0.26 16 41 H 0.09 0.25 6.17 -51.93 -0.32 -0.07 16 42 H 0.07 -0.12 7.61 -51.93 -0.39 -0.51 16 43 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 44 H 0.06 -0.04 4.81 -51.93 -0.25 -0.29 16 45 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 46 H 0.06 -0.09 8.14 -51.92 -0.42 -0.52 16 47 H 0.07 -0.28 6.86 -51.93 -0.36 -0.64 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 49 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 50 H 0.10 0.01 6.16 -51.93 -0.32 -0.31 16 LS Contribution 386.44 15.07 5.82 5.82 Total: 0.00 -8.62 386.44 -10.28 -18.90 By element: Atomic # 1 Polarization: -5.13 SS G_CDS: -7.66 Total: -12.79 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -1.91 Total: 0.63 kcal Atomic # 7 Polarization: 1.31 SS G_CDS: -0.20 Total: 1.11 kcal Atomic # 8 Polarization: -7.16 SS G_CDS: -1.28 Total: -8.44 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.06 Total: -5.24 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -8.62 -10.28 -18.90 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_12335836.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.410 kcal (2) G-P(sol) polarization free energy of solvation -8.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.307 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds