Wall clock time and date at job start Sat Mar 6 2021 20:49:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34232 * 116.99454 * 2 1 4 4 O 1.20815 * 120.00498 * 0.02562 * 3 2 1 5 5 C 1.50706 * 119.99422 * 180.02562 * 3 2 1 6 6 N 1.46496 * 109.47106 * 35.00460 * 5 3 2 7 7 C 1.34774 * 120.00233 * 299.99439 * 6 5 3 8 8 O 1.21586 * 120.00058 * 0.02562 * 7 6 5 9 9 C 1.47579 * 120.00330 * 180.02562 * 7 6 5 10 10 C 1.40199 * 119.82902 * 359.72702 * 9 7 6 11 11 C 1.36237 * 120.38058 * 179.73529 * 10 9 7 12 12 C 1.39877 * 119.95407 * 0.55877 * 11 10 9 13 13 C 1.40932 * 120.16924 * 359.69820 * 12 11 10 14 14 C 1.38642 * 119.49006 * 0.02562 * 13 12 11 15 15 N 1.37821 * 107.13013 * 180.02562 * 13 12 11 16 16 C 1.36572 * 109.85875 * 0.02562 * 15 13 12 17 17 C 1.34448 * 109.98636 * 359.97438 * 16 15 13 18 18 C 1.50694 * 126.48378 * 179.97438 * 17 16 15 19 19 O 1.42906 * 109.47133 * 255.02176 * 18 17 16 20 20 Si 1.86306 * 109.47208 * 15.02165 * 18 17 16 21 21 C 1.52997 * 109.47103 * 275.00394 * 5 3 2 22 22 C 1.53006 * 109.46974 * 180.02562 * 21 5 3 23 23 C 1.52999 * 109.46997 * 59.99987 * 22 21 5 24 24 H 1.09002 * 109.46716 * 180.02562 * 23 22 21 25 25 C 1.52997 * 109.47317 * 60.00177 * 23 22 21 26 26 C 1.52992 * 109.46961 * 299.99715 * 23 22 21 27 27 C 1.52996 * 109.47224 * 60.00654 * 26 23 22 28 28 H 1.08999 * 109.47221 * 59.99551 * 1 2 3 29 29 H 1.09002 * 109.46372 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46826 * 299.99091 * 1 2 3 31 31 H 0.97004 * 119.99916 * 119.99737 * 6 5 3 32 32 H 1.08005 * 119.81181 * 359.97438 * 10 9 7 33 33 H 1.07992 * 120.02713 * 180.27888 * 11 10 9 34 34 H 1.08000 * 120.16940 * 180.02562 * 14 13 12 35 35 H 0.97002 * 125.07625 * 180.02562 * 15 13 12 36 36 H 1.08003 * 125.00488 * 179.97438 * 16 15 13 37 37 H 1.09007 * 109.47428 * 135.02119 * 18 17 16 38 38 H 0.96703 * 114.00012 * 179.97438 * 19 18 17 39 39 H 1.48500 * 110.00069 * 300.00305 * 20 18 17 40 40 H 1.48500 * 109.99448 * 61.32018 * 20 18 17 41 41 H 1.09000 * 109.47140 * 300.00046 * 21 5 3 42 42 H 1.09001 * 109.47375 * 60.00064 * 21 5 3 43 43 H 1.09000 * 109.46866 * 299.99774 * 22 21 5 44 44 H 1.09001 * 109.46611 * 179.97438 * 22 21 5 45 45 H 1.09002 * 109.47153 * 299.99641 * 25 23 22 46 46 H 1.09001 * 109.46832 * 179.97438 * 25 23 22 47 47 H 1.09004 * 109.47261 * 59.99813 * 25 23 22 48 48 H 1.09001 * 109.47066 * 180.02562 * 26 23 22 49 49 H 1.08996 * 109.47747 * 300.00196 * 26 23 22 50 50 H 1.09004 * 109.47552 * 59.99646 * 27 26 23 51 51 H 1.09004 * 109.47298 * 179.97438 * 27 26 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1129 0.1709 -0.7933 7 6 3.8539 -1.1041 -0.4415 8 8 3.1663 -1.3380 0.5335 9 6 4.4049 -2.2164 -1.2398 10 6 5.1927 -1.9426 -2.3668 11 6 5.7115 -2.9607 -3.1086 12 6 5.4490 -4.2879 -2.7534 13 6 4.6541 -4.5753 -1.6257 14 6 4.1349 -3.5330 -0.8731 15 7 4.5716 -5.9474 -1.5262 16 6 5.2787 -6.5294 -2.5393 17 6 5.8329 -5.5822 -3.3161 18 6 6.6886 -5.8108 -4.5352 19 8 8.0559 -5.5477 -4.2137 20 14 6.5116 -7.5787 -5.0956 21 6 4.0828 1.1757 1.4362 22 6 5.6107 1.2564 1.4356 23 6 6.0508 2.5891 0.8264 24 1 7.1393 2.6463 0.8256 25 6 5.4795 3.7418 1.6544 26 6 5.5343 2.6882 -0.6104 27 6 4.0065 2.6076 -0.6098 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3632 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8901 31 1 4.6612 0.3575 -1.5714 32 1 5.3926 -0.9186 -2.6463 33 1 6.3212 -2.7433 -3.9730 34 1 3.5247 -3.7407 -0.0065 35 1 4.0840 -6.4282 -0.8391 36 1 5.3781 -7.5937 -2.6938 37 1 6.3682 -5.1425 -5.3346 38 1 8.6655 -5.6753 -4.9534 39 1 6.9452 -8.5000 -4.0147 40 1 5.0998 -7.8559 -5.4633 41 1 3.6761 1.9972 2.0260 42 1 3.7689 0.2265 1.8704 43 1 6.0177 0.4351 0.8457 44 1 5.9786 1.1861 2.4593 45 1 4.3910 3.6844 1.6548 46 1 5.7935 4.6912 1.2206 47 1 5.8475 3.6711 2.6780 48 1 5.8482 3.6375 -1.0446 49 1 5.9413 1.8671 -1.2003 50 1 3.5994 3.4289 -0.0199 51 1 3.6385 2.6787 -1.6334 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_12335838.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:49:11 Heat of formation + Delta-G solvation = -82.432748 kcal Electronic energy + Delta-G solvation = -35679.697480 eV Core-core repulsion = 31125.386543 eV Total energy + Delta-G solvation = -4554.310937 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.57532 -42.24593 -40.44041 -39.49094 -37.80140 -37.47073 -37.17534 -35.45241 -33.35831 -32.24876 -31.98616 -30.75932 -30.16223 -28.90848 -27.73049 -26.48101 -25.03275 -24.16915 -23.88857 -23.60975 -21.83388 -21.13670 -20.60541 -19.56440 -19.29537 -18.66962 -18.37525 -18.26142 -17.67663 -17.29240 -17.16152 -16.67361 -16.37263 -15.83688 -15.64523 -15.54450 -15.44763 -15.07105 -14.97421 -14.89565 -14.75591 -14.71397 -14.49861 -14.34699 -14.01183 -13.79576 -13.68669 -13.56630 -13.29995 -13.20538 -12.90548 -12.69623 -12.65975 -12.57189 -12.54349 -12.13442 -12.07668 -11.90774 -11.70822 -11.53825 -11.41221 -11.28777 -11.08291 -10.74571 -10.62370 -10.23983 -10.10035 -9.34915 -8.81911 -5.05402 -0.24046 0.40446 1.21380 1.26271 1.33118 1.61913 1.80069 1.87680 1.92427 2.10977 2.19596 2.96262 3.32088 3.51718 3.57377 3.59800 3.68097 3.69975 3.78801 3.95495 3.99225 4.01044 4.08383 4.10544 4.22628 4.23556 4.32512 4.38072 4.39608 4.40479 4.43438 4.49775 4.56108 4.58529 4.73122 4.73661 4.75343 4.80048 4.85394 4.95396 4.99183 5.04356 5.09124 5.14557 5.23602 5.24866 5.31721 5.38465 5.43538 5.47457 5.49973 5.58315 5.60133 5.98304 6.34522 6.47468 6.68895 6.88624 7.30123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.320 6.320 3 C 0.457 3.543 4 O -0.508 6.508 5 C 0.200 3.800 6 N -0.718 5.718 7 C 0.564 3.436 8 O -0.500 6.500 9 C -0.116 4.116 10 C -0.115 4.115 11 C -0.069 4.069 12 C -0.063 4.063 13 C 0.083 3.917 14 C -0.055 4.055 15 N -0.583 5.583 16 C 0.071 3.929 17 C -0.163 4.163 18 C -0.033 4.033 19 O -0.547 6.547 20 Si 0.684 3.316 21 C -0.132 4.132 22 C -0.108 4.108 23 C -0.095 4.095 24 H 0.076 0.924 25 C -0.155 4.155 26 C -0.113 4.113 27 C -0.117 4.117 28 H 0.059 0.941 29 H 0.099 0.901 30 H 0.061 0.939 31 H 0.405 0.595 32 H 0.125 0.875 33 H 0.130 0.870 34 H 0.137 0.863 35 H 0.422 0.578 36 H 0.169 0.831 37 H 0.071 0.929 38 H 0.379 0.621 39 H -0.254 1.254 40 H -0.256 1.256 41 H 0.080 0.920 42 H 0.095 0.905 43 H 0.067 0.933 44 H 0.070 0.930 45 H 0.060 0.940 46 H 0.056 0.944 47 H 0.056 0.944 48 H 0.076 0.924 49 H 0.065 0.935 50 H 0.098 0.902 51 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.962 -2.376 -4.856 6.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.235 6.235 3 C 0.298 3.702 4 O -0.395 6.395 5 C 0.112 3.888 6 N -0.374 5.374 7 C 0.352 3.648 8 O -0.375 6.375 9 C -0.120 4.120 10 C -0.135 4.135 11 C -0.088 4.088 12 C -0.068 4.068 13 C -0.023 4.023 14 C -0.077 4.077 15 N -0.186 5.186 16 C -0.058 4.058 17 C -0.170 4.170 18 C -0.145 4.145 19 O -0.353 6.353 20 Si 0.585 3.415 21 C -0.170 4.170 22 C -0.145 4.145 23 C -0.113 4.113 24 H 0.094 0.906 25 C -0.212 4.212 26 C -0.151 4.151 27 C -0.154 4.154 28 H 0.077 0.923 29 H 0.118 0.882 30 H 0.080 0.920 31 H 0.242 0.758 32 H 0.143 0.857 33 H 0.148 0.852 34 H 0.155 0.845 35 H 0.260 0.740 36 H 0.186 0.814 37 H 0.089 0.911 38 H 0.226 0.774 39 H -0.178 1.178 40 H -0.181 1.181 41 H 0.099 0.901 42 H 0.113 0.887 43 H 0.085 0.915 44 H 0.089 0.911 45 H 0.079 0.921 46 H 0.075 0.925 47 H 0.075 0.925 48 H 0.094 0.906 49 H 0.084 0.916 50 H 0.117 0.883 51 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.484 -2.998 -3.314 5.113 hybrid contribution -0.515 0.254 0.170 0.598 sum 1.970 -2.745 -3.144 4.615 Atomic orbital electron populations 1.23286 0.77357 1.03623 1.02141 1.86885 1.22357 1.31660 1.82560 1.24108 0.91850 0.82024 0.72207 1.90678 1.66697 1.36611 1.45553 1.20157 0.85244 0.88605 0.94827 1.45936 1.54897 1.04682 1.31934 1.18072 0.79923 0.82281 0.84562 1.90790 1.36130 1.83874 1.26689 1.19396 1.02435 0.92431 0.97741 1.20680 0.98596 0.99137 0.95048 1.20166 0.98928 0.89945 0.99760 1.19144 0.99123 0.93227 0.95317 1.18078 1.02144 0.83652 0.98446 1.20049 0.99261 0.89234 0.99120 1.41672 1.45810 1.04611 1.26472 1.21642 0.96591 0.98129 0.89421 1.19612 1.06084 0.91231 1.00120 1.23932 0.83422 1.11351 0.95777 1.86542 1.15556 1.92563 1.40612 0.95094 0.84263 0.75418 0.86757 1.22018 0.97127 1.04988 0.92873 1.21499 0.94065 0.97338 1.01605 1.21153 1.00398 0.95197 0.94595 0.90584 1.21976 1.01531 0.97797 0.99901 1.21596 0.93707 1.02680 0.97109 1.21813 0.97181 0.94315 1.02134 0.92261 0.88248 0.92012 0.75757 0.85684 0.85181 0.84514 0.73995 0.81369 0.91119 0.77364 1.17803 1.18058 0.90110 0.88685 0.91464 0.91117 0.92077 0.92471 0.92515 0.90553 0.91648 0.88329 0.90542 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.14 16 2 O -0.32 -1.51 6.72 -47.37 -0.32 -1.83 16 3 C 0.46 1.99 6.71 36.01 0.24 2.23 16 4 O -0.51 -3.21 15.84 -18.74 -0.30 -3.51 16 5 C 0.20 0.27 0.63 -132.97 -0.08 0.18 16 6 N -0.72 -0.20 3.98 -49.70 -0.20 -0.40 16 7 C 0.56 1.42 6.69 -12.45 -0.08 1.34 16 8 O -0.50 -2.60 11.55 -19.22 -0.22 -2.82 16 9 C -0.12 -0.22 5.87 -104.95 -0.62 -0.84 16 10 C -0.11 -0.03 9.46 -39.57 -0.37 -0.41 16 11 C -0.07 -0.08 10.03 -39.69 -0.40 -0.48 16 12 C -0.06 -0.17 6.35 -105.04 -0.67 -0.84 16 13 C 0.08 0.20 7.26 -84.00 -0.61 -0.41 16 14 C -0.06 -0.13 9.61 -39.03 -0.37 -0.50 16 15 N -0.58 -0.29 6.07 -10.68 -0.06 -0.35 16 16 C 0.07 0.07 10.43 -16.78 -0.17 -0.11 16 17 C -0.16 -0.33 5.60 -102.74 -0.58 -0.91 16 18 C -0.03 0.01 3.05 36.00 0.11 0.12 16 19 O -0.55 0.02 12.86 -35.23 -0.45 -0.43 16 20 Si 0.68 -1.34 30.79 -169.99 -5.23 -6.57 16 21 C -0.13 -0.18 4.23 -26.73 -0.11 -0.29 16 22 C -0.11 0.03 5.29 -26.73 -0.14 -0.12 16 23 C -0.10 0.13 3.19 -90.63 -0.29 -0.16 16 24 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 25 C -0.15 0.14 8.50 37.16 0.32 0.46 16 26 C -0.11 0.23 5.28 -26.74 -0.14 0.09 16 27 C -0.12 0.04 4.04 -26.73 -0.11 -0.06 16 28 H 0.06 0.12 8.13 -51.93 -0.42 -0.30 16 29 H 0.10 0.06 8.14 -51.93 -0.42 -0.37 16 30 H 0.06 0.15 8.13 -51.93 -0.42 -0.28 16 31 H 0.40 -0.86 5.31 -40.82 -0.22 -1.08 16 32 H 0.13 -0.33 6.36 -52.48 -0.33 -0.67 16 33 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 34 H 0.14 0.27 7.62 -52.49 -0.40 -0.13 16 35 H 0.42 -1.02 8.96 -40.82 -0.37 -1.38 16 36 H 0.17 -0.17 6.30 -52.48 -0.33 -0.50 16 37 H 0.07 -0.12 7.96 -51.92 -0.41 -0.54 16 38 H 0.38 -1.94 8.74 45.56 0.40 -1.55 16 39 H -0.25 -0.17 7.04 56.52 0.40 0.23 16 40 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 41 H 0.08 0.11 6.43 -51.93 -0.33 -0.22 16 42 H 0.09 0.33 6.16 -51.93 -0.32 0.01 16 43 H 0.07 0.01 7.60 -51.93 -0.39 -0.39 16 44 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 45 H 0.06 -0.01 4.81 -51.93 -0.25 -0.26 16 46 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 47 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 48 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 49 H 0.06 -0.20 6.86 -51.93 -0.36 -0.56 16 50 H 0.10 0.05 6.16 -51.93 -0.32 -0.27 16 51 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 395.35 15.07 5.96 5.96 Total: 0.00 -10.15 395.35 -10.91 -21.06 By element: Atomic # 1 Polarization: -4.46 SS G_CDS: -7.06 Total: -11.53 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -3.02 Total: 0.42 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.26 Total: -0.75 kcal Atomic # 8 Polarization: -7.30 SS G_CDS: -1.29 Total: -8.59 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.23 Total: -6.57 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -10.15 -10.91 -21.06 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_12335838.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.371 kcal (2) G-P(sol) polarization free energy of solvation -10.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.912 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.062 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds