Wall clock time and date at job start Sat Mar 6 2021 20:49:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34231 * 117.00086 * 2 1 4 4 O 1.20825 * 119.99880 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99895 * 180.02562 * 3 2 1 6 6 N 1.46495 * 109.47330 * 34.99742 * 5 3 2 7 7 C 1.34780 * 120.00150 * 299.99890 * 6 5 3 8 8 O 1.21551 * 119.99619 * 0.02562 * 7 6 5 9 9 C 1.47841 * 119.99865 * 180.02562 * 7 6 5 10 10 C 1.39548 * 120.14349 * 0.02562 * 9 7 6 11 11 C 1.38075 * 119.84498 * 180.02562 * 10 9 7 12 12 Br 1.89100 * 119.93655 * 179.97438 * 11 10 9 13 13 C 1.38428 * 120.12181 * 0.25015 * 11 10 9 14 14 C 1.38362 * 120.28126 * 359.49368 * 13 11 10 15 15 C 1.50695 * 119.91964 * 180.26010 * 14 13 11 16 16 O 1.42905 * 109.47061 * 245.25134 * 15 14 13 17 17 Si 1.86304 * 109.47260 * 5.24779 * 15 14 13 18 18 C 1.37942 * 120.15609 * 0.50796 * 14 13 11 19 19 C 1.53002 * 109.47000 * 274.99556 * 5 3 2 20 20 C 1.52995 * 109.47070 * 180.02562 * 19 5 3 21 21 C 1.52999 * 109.47129 * 60.00850 * 20 19 5 22 22 H 1.09001 * 109.47382 * 179.97438 * 21 20 19 23 23 C 1.52995 * 109.47515 * 59.99410 * 21 20 19 24 24 C 1.53002 * 109.46764 * 299.99747 * 21 20 19 25 25 C 1.52999 * 109.46838 * 155.00229 * 5 3 2 26 26 H 1.08998 * 109.47217 * 60.00296 * 1 2 3 27 27 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.46837 * 299.99372 * 1 2 3 29 29 H 0.97006 * 120.00107 * 120.00502 * 6 5 3 30 30 H 1.08002 * 120.07377 * 359.97438 * 10 9 7 31 31 H 1.08001 * 119.85408 * 179.74659 * 13 11 10 32 32 H 1.09000 * 109.47846 * 125.25542 * 15 14 13 33 33 H 0.96701 * 113.99977 * 59.99505 * 16 15 14 34 34 H 1.48498 * 109.99864 * 58.68614 * 17 15 14 35 35 H 1.48506 * 109.99910 * 180.02562 * 17 15 14 36 36 H 1.08006 * 120.05648 * 179.72546 * 18 14 13 37 37 H 1.09000 * 109.47277 * 300.00899 * 19 5 3 38 38 H 1.09011 * 109.47057 * 60.00286 * 19 5 3 39 39 H 1.08994 * 109.47577 * 300.00163 * 20 19 5 40 40 H 1.09006 * 109.47096 * 179.97438 * 20 19 5 41 41 H 1.09009 * 109.47091 * 300.00348 * 23 21 20 42 42 H 1.08998 * 109.47502 * 60.00426 * 23 21 20 43 43 H 1.09004 * 109.47496 * 180.02562 * 23 21 20 44 44 H 1.09008 * 109.46812 * 299.99775 * 24 21 20 45 45 H 1.09003 * 109.47542 * 180.02562 * 24 21 20 46 46 H 1.08997 * 109.47151 * 299.99392 * 25 5 3 47 47 H 1.08994 * 109.47448 * 59.99928 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 7 4.1129 0.1707 -0.7932 7 6 3.8538 -1.1043 -0.4413 8 8 3.1663 -1.3380 0.5335 9 6 4.4059 -2.2186 -1.2408 10 6 5.1961 -1.9537 -2.3602 11 6 5.7081 -2.9990 -3.1028 12 35 6.7785 -2.6430 -4.6205 13 6 5.4345 -4.3071 -2.7417 14 6 4.6561 -4.5757 -1.6299 15 6 4.3683 -6.0029 -1.2408 16 8 2.9696 -6.2613 -1.3785 17 14 5.3246 -7.1540 -2.3504 18 6 4.1386 -3.5402 -0.8796 19 6 4.0828 1.1758 1.4362 20 6 5.6106 1.2564 1.4357 21 6 6.0507 2.5891 0.8265 22 1 7.1392 2.6468 0.8265 23 6 5.4794 3.7419 1.6544 24 6 5.5343 2.6882 -0.6103 25 6 4.0070 2.6072 -0.6101 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5137 0.8900 29 1 4.6614 0.3571 -1.5713 30 1 5.4059 -0.9333 -2.6453 31 1 5.8339 -5.1214 -3.3281 32 1 4.6673 -6.1646 -0.2052 33 1 2.6332 -6.1369 -2.2765 34 1 6.7788 -6.8740 -2.2403 35 1 5.0489 -8.5647 -1.9773 36 1 3.5275 -3.7517 -0.0146 37 1 3.6760 1.9972 2.0260 38 1 3.7688 0.2265 1.8706 39 1 6.0177 0.4352 0.8459 40 1 5.9785 1.1863 2.4594 41 1 4.3908 3.6844 1.6547 42 1 5.8472 3.6713 2.6780 43 1 5.7926 4.6913 1.2201 44 1 5.9414 1.8669 -1.2002 45 1 5.8482 3.6375 -1.0446 46 1 3.6391 2.6778 -1.6337 47 1 3.6003 3.4287 -0.0203 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:49:31 Heat of formation + Delta-G solvation = -109.726536 kcal Electronic energy + Delta-G solvation = -32950.666242 eV Core-core repulsion = 28532.769565 eV Total energy + Delta-G solvation = -4417.896677 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.076 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.63142 -41.22504 -40.29429 -39.26627 -37.66477 -37.51655 -35.63709 -33.58253 -33.45372 -32.00845 -31.45780 -30.41525 -29.08455 -27.77640 -26.99282 -25.53857 -24.38479 -23.91442 -22.77596 -22.00240 -21.27620 -19.72234 -19.15439 -18.84057 -18.11475 -17.79693 -17.53350 -17.37199 -16.98440 -16.68188 -16.33094 -16.13711 -15.68378 -15.47550 -15.32087 -15.07832 -14.95899 -14.86260 -14.53548 -14.29014 -14.10274 -14.01405 -13.78851 -13.66532 -13.35457 -13.22735 -13.10204 -12.94777 -12.71543 -12.63441 -12.21448 -12.13858 -11.95671 -11.92383 -11.84949 -11.83259 -11.46520 -11.36011 -11.26735 -11.17277 -10.89402 -10.53442 -10.34625 -10.16754 -9.87923 -5.04374 -0.46600 -0.12575 0.46759 0.90332 1.23013 1.51601 1.60271 1.72327 1.86730 1.96149 2.53231 3.18813 3.30113 3.43380 3.51388 3.58248 3.61089 3.81251 3.91132 3.96973 3.97690 4.01998 4.06032 4.16890 4.21372 4.22815 4.24666 4.32302 4.39040 4.44752 4.51367 4.56453 4.59881 4.77377 4.79395 4.83240 4.86761 4.96614 5.01354 5.04769 5.08485 5.11039 5.15081 5.24862 5.28653 5.33628 5.38193 5.41479 5.53916 6.32820 6.56872 6.73139 7.07758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.333 6.333 3 C 0.451 3.549 4 O -0.533 6.533 5 C 0.204 3.796 6 N -0.704 5.704 7 C 0.561 3.439 8 O -0.522 6.522 9 C -0.129 4.129 10 C -0.047 4.047 11 C -0.098 4.098 12 Br -0.029 7.029 13 C -0.061 4.061 14 C -0.117 4.117 15 C -0.072 4.072 16 O -0.552 6.552 17 Si 0.766 3.234 18 C -0.027 4.027 19 C -0.128 4.128 20 C -0.102 4.102 21 C -0.092 4.092 22 H 0.087 0.913 23 C -0.156 4.156 24 C -0.109 4.109 25 C -0.114 4.114 26 H 0.062 0.938 27 H 0.118 0.882 28 H 0.057 0.943 29 H 0.418 0.582 30 H 0.160 0.840 31 H 0.156 0.844 32 H 0.113 0.887 33 H 0.397 0.603 34 H -0.277 1.277 35 H -0.295 1.295 36 H 0.132 0.868 37 H 0.076 0.924 38 H 0.072 0.928 39 H 0.068 0.932 40 H 0.069 0.931 41 H 0.050 0.950 42 H 0.053 0.947 43 H 0.062 0.938 44 H 0.081 0.919 45 H 0.089 0.911 46 H 0.083 0.917 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.090 0.308 -5.404 6.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.247 6.247 3 C 0.293 3.707 4 O -0.422 6.422 5 C 0.116 3.884 6 N -0.361 5.361 7 C 0.348 3.652 8 O -0.398 6.398 9 C -0.133 4.133 10 C -0.067 4.067 11 C -0.178 4.178 12 Br 0.056 6.944 13 C -0.080 4.080 14 C -0.118 4.118 15 C -0.182 4.182 16 O -0.360 6.360 17 Si 0.671 3.329 18 C -0.046 4.046 19 C -0.166 4.166 20 C -0.140 4.140 21 C -0.110 4.110 22 H 0.105 0.895 23 C -0.213 4.213 24 C -0.147 4.147 25 C -0.151 4.151 26 H 0.081 0.919 27 H 0.136 0.864 28 H 0.076 0.924 29 H 0.258 0.742 30 H 0.178 0.822 31 H 0.173 0.827 32 H 0.130 0.870 33 H 0.247 0.753 34 H -0.204 1.204 35 H -0.222 1.222 36 H 0.150 0.850 37 H 0.094 0.906 38 H 0.091 0.909 39 H 0.087 0.913 40 H 0.088 0.912 41 H 0.069 0.931 42 H 0.072 0.928 43 H 0.081 0.919 44 H 0.100 0.900 45 H 0.107 0.893 46 H 0.102 0.898 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 4.407 -0.177 -4.700 6.445 hybrid contribution -0.731 0.344 0.916 1.221 sum 3.677 0.167 -3.783 5.278 Atomic orbital electron populations 1.23451 0.76413 1.04901 1.02128 1.86877 1.23512 1.31960 1.82375 1.24734 0.92997 0.81587 0.71368 1.90664 1.67504 1.37281 1.46771 1.20207 0.83452 0.89621 0.95108 1.45814 1.54372 1.03899 1.32047 1.18255 0.79730 0.82863 0.84322 1.90813 1.37099 1.84197 1.27737 1.19825 1.02268 0.93584 0.97644 1.21461 0.93372 0.99936 0.91935 1.21728 1.03017 0.95565 0.97467 1.96865 1.66610 1.95725 1.35156 1.21353 0.95494 0.95867 0.95297 1.20313 0.99098 0.96645 0.95761 1.25201 0.89239 0.95859 1.07911 1.86517 1.21338 1.91269 1.36896 0.93923 0.76863 0.75247 0.86840 1.21237 0.94707 0.90605 0.98064 1.21951 0.98434 1.03555 0.92707 1.21468 0.92499 0.98158 1.01832 1.21151 1.00956 0.94058 0.94863 0.89498 1.21978 1.00905 0.98403 1.00014 1.21615 0.92108 1.04109 0.96822 1.21819 0.98523 0.92685 1.02101 0.91880 0.86418 0.92430 0.74233 0.82249 0.82653 0.87004 0.75325 1.20350 1.22238 0.84994 0.90567 0.90939 0.91301 0.91222 0.93085 0.92799 0.91899 0.90008 0.89276 0.89819 0.89339 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.12 10.56 113.37 1.20 1.31 16 2 O -0.33 -3.02 6.72 -43.68 -0.29 -3.31 16 3 C 0.45 3.72 6.71 71.24 0.48 4.20 16 4 O -0.53 -6.78 15.84 21.97 0.35 -6.43 16 5 C 0.20 0.25 0.63 2.86 0.00 0.25 16 6 N -0.70 1.53 3.99 -429.18 -1.71 -0.18 16 7 C 0.56 1.41 6.71 86.78 0.58 2.00 16 8 O -0.52 -4.98 11.59 19.56 0.23 -4.75 16 9 C -0.13 0.07 5.87 -20.09 -0.12 -0.05 16 10 C -0.05 0.22 9.28 22.55 0.21 0.43 16 11 C -0.10 0.39 6.22 22.28 0.14 0.53 16 12 Br -0.03 0.12 33.69 -20.37 -0.69 -0.57 16 13 C -0.06 0.26 8.40 22.34 0.19 0.45 16 14 C -0.12 0.27 5.34 -19.91 -0.11 0.16 16 15 C -0.07 0.17 2.80 71.23 0.20 0.37 16 16 O -0.55 0.62 12.83 -148.98 -1.91 -1.29 16 17 Si 0.77 -3.15 29.79 68.60 2.04 -1.10 16 18 C -0.03 -0.02 9.23 22.53 0.21 0.18 16 19 C -0.13 -0.27 4.23 30.59 0.13 -0.14 16 20 C -0.10 0.23 5.29 30.59 0.16 0.40 16 21 C -0.09 0.47 3.19 -10.79 -0.03 0.43 16 22 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 23 C -0.16 0.48 8.50 71.98 0.61 1.10 16 24 C -0.11 0.79 5.28 30.58 0.16 0.95 16 25 C -0.11 0.31 4.03 30.58 0.12 0.43 16 26 H 0.06 0.23 8.13 -2.39 -0.02 0.22 16 27 H 0.12 0.08 8.14 -2.39 -0.02 0.06 16 28 H 0.06 0.31 8.13 -2.39 -0.02 0.29 16 29 H 0.42 -3.44 5.35 -92.70 -0.50 -3.94 16 30 H 0.16 -1.60 6.40 -2.91 -0.02 -1.62 16 31 H 0.16 -1.20 4.89 -2.91 -0.01 -1.21 16 32 H 0.11 -0.12 7.96 -2.39 -0.02 -0.14 16 33 H 0.40 -3.74 8.70 -74.06 -0.64 -4.39 16 34 H -0.28 -0.01 7.11 99.48 0.71 0.70 16 35 H -0.29 -1.09 7.11 99.48 0.71 -0.39 16 36 H 0.13 0.53 7.65 -2.91 -0.02 0.51 16 37 H 0.08 0.23 6.43 -2.39 -0.02 0.22 16 38 H 0.07 0.52 6.17 -2.38 -0.01 0.50 16 39 H 0.07 -0.19 7.60 -2.39 -0.02 -0.21 16 40 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 41 H 0.05 -0.04 4.81 -2.38 -0.01 -0.05 16 42 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 43 H 0.06 -0.25 8.14 -2.38 -0.02 -0.27 16 44 H 0.08 -0.86 6.86 -2.38 -0.02 -0.87 16 45 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 46 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 47 H 0.09 0.01 6.16 -2.39 -0.01 0.00 16 Total: 0.00 -19.31 383.20 2.08 -17.23 By element: Atomic # 1 Polarization: -12.53 SS G_CDS: -0.07 Total: -12.59 kcal Atomic # 6 Polarization: 8.87 SS G_CDS: 4.13 Total: 13.00 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -1.71 Total: -0.18 kcal Atomic # 8 Polarization: -14.15 SS G_CDS: -1.63 Total: -15.79 kcal Atomic # 14 Polarization: -3.15 SS G_CDS: 2.04 Total: -1.10 kcal Atomic # 35 Polarization: 0.12 SS G_CDS: -0.69 Total: -0.57 kcal Total: -19.31 2.08 -17.23 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.495 kcal (2) G-P(sol) polarization free energy of solvation -19.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.080 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.232 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.727 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds