Wall clock time and date at job start Sat Mar 6 2021 20:50:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34228 * 116.99743 * 2 1 4 4 O 1.20823 * 120.00603 * 359.97438 * 3 2 1 5 5 C 1.50706 * 119.99525 * 179.97438 * 3 2 1 6 6 N 1.46496 * 109.47106 * 34.99803 * 5 3 2 7 7 C 1.34774 * 120.00233 * 299.99439 * 6 5 3 8 8 O 1.21645 * 119.99682 * 0.02562 * 7 6 5 9 9 C 1.47062 * 120.00074 * 179.97438 * 7 6 5 10 10 C 1.35867 * 125.42572 * 179.69135 * 9 7 6 11 11 C 1.41590 * 107.72711 * 179.88419 * 10 9 7 12 12 C 1.40057 * 133.37843 * 180.08243 * 11 10 9 13 13 C 1.36479 * 119.82989 * 180.33028 * 12 11 10 14 14 C 1.38897 * 120.61409 * 359.97438 * 13 12 11 15 15 C 1.50696 * 119.67861 * 180.02562 * 14 13 12 16 16 O 1.42901 * 109.47386 * 120.00282 * 15 14 13 17 17 Si 1.86299 * 109.46857 * 0.02562 * 15 14 13 18 18 C 1.37714 * 120.64828 * 359.97438 * 14 13 12 19 19 C 1.39189 * 119.81015 * 0.02758 * 18 14 13 20 20 N 1.37478 * 133.18891 * 179.97438 * 19 18 14 21 21 C 1.52997 * 109.47103 * 274.99736 * 5 3 2 22 22 C 1.52996 * 109.46975 * 180.02562 * 21 5 3 23 23 C 1.53002 * 109.47343 * 59.99992 * 22 21 5 24 24 H 1.09002 * 109.47067 * 180.02562 * 23 22 21 25 25 C 1.52997 * 109.47143 * 60.00066 * 23 22 21 26 26 C 1.53005 * 109.46982 * 299.99735 * 23 22 21 27 27 C 1.52996 * 109.46543 * 60.00174 * 26 23 22 28 28 H 1.09001 * 109.47189 * 300.00147 * 1 2 3 29 29 H 1.08999 * 109.46673 * 60.00494 * 1 2 3 30 30 H 1.08998 * 109.47228 * 180.02562 * 1 2 3 31 31 H 0.97004 * 119.99916 * 119.99737 * 6 5 3 32 32 H 1.07998 * 126.13383 * 0.03058 * 10 9 7 33 33 H 1.07996 * 120.08979 * 0.35236 * 12 11 10 34 34 H 1.07995 * 119.69341 * 180.02562 * 13 12 11 35 35 H 1.09000 * 109.47287 * 240.00317 * 15 14 13 36 36 H 0.96696 * 113.99850 * 299.99930 * 16 15 14 37 37 H 1.48507 * 109.99821 * 180.02562 * 17 15 14 38 38 H 1.48494 * 110.00331 * 301.31829 * 17 15 14 39 39 H 1.08002 * 120.09607 * 179.97438 * 18 14 13 40 40 H 0.97004 * 125.60569 * 0.02804 * 20 19 18 41 41 H 1.09000 * 109.47140 * 300.00046 * 21 5 3 42 42 H 1.08992 * 109.47280 * 59.99899 * 21 5 3 43 43 H 1.09004 * 109.47368 * 299.99783 * 22 21 5 44 44 H 1.09004 * 109.47108 * 179.97438 * 22 21 5 45 45 H 1.09002 * 109.47153 * 299.99965 * 25 23 22 46 46 H 1.08996 * 109.46952 * 60.00137 * 25 23 22 47 47 H 1.09001 * 109.46832 * 180.02562 * 25 23 22 48 48 H 1.09000 * 109.47360 * 300.00293 * 26 23 22 49 49 H 1.09001 * 109.46812 * 179.97438 * 26 23 22 50 50 H 1.09004 * 109.46785 * 179.97438 * 27 26 23 51 51 H 1.09004 * 109.47694 * 60.00013 * 27 26 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1135 0.1703 -0.7911 7 6 3.8542 -1.1045 -0.4389 8 8 3.1655 -1.3379 0.5362 9 6 4.4030 -2.2132 -1.2340 10 6 4.2173 -3.5343 -0.9767 11 6 4.9049 -4.2684 -1.9732 12 6 5.0667 -5.6376 -2.2196 13 6 5.8126 -6.0523 -3.2847 14 6 6.4140 -5.1283 -4.1296 15 6 7.2325 -5.6095 -5.2998 16 8 6.6640 -5.1153 -6.5141 17 14 7.2374 -7.4722 -5.3300 18 6 6.2689 -3.7767 -3.9089 19 6 5.5131 -3.3291 -2.8292 20 7 5.1926 -2.0775 -2.3595 21 6 4.0817 1.1763 1.4378 22 6 5.6095 1.2570 1.4384 23 6 6.0502 2.5893 0.8288 24 1 7.1387 2.6465 0.8289 25 6 5.4783 3.7425 1.6558 26 6 5.5349 2.6878 -0.6085 27 6 4.0071 2.6072 -0.6090 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 4.6625 0.3565 -1.5689 32 1 3.6456 -3.9498 -0.1601 33 1 4.6023 -6.3635 -1.5687 34 1 5.9356 -7.1086 -3.4729 35 1 8.2551 -5.2447 -5.2025 36 1 5.7529 -5.4009 -6.6666 37 1 8.0419 -7.9594 -6.4793 38 1 7.7967 -7.9994 -4.0595 39 1 6.7408 -3.0661 -4.5713 40 1 5.4754 -1.2371 -2.7529 41 1 3.6746 1.9981 2.0269 42 1 3.7674 0.2274 1.8722 43 1 6.0170 0.4354 0.8492 44 1 5.9766 1.1872 2.4624 45 1 4.3898 3.6851 1.6554 46 1 5.8455 3.6723 2.6797 47 1 5.7919 4.6917 1.2213 48 1 5.9423 1.8662 -1.1976 49 1 5.8485 3.6372 -1.0426 50 1 3.6399 2.6778 -1.6329 51 1 3.5996 3.4288 -0.0198 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:22 Heat of formation + Delta-G solvation = -84.489777 kcal Electronic energy + Delta-G solvation = -35494.040030 eV Core-core repulsion = 30939.639893 eV Total energy + Delta-G solvation = -4554.400137 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.85796 -42.24704 -40.44747 -39.57005 -38.84922 -37.30465 -36.90851 -35.64782 -33.29877 -32.35930 -32.11868 -30.80019 -30.40565 -29.01946 -27.85856 -26.89691 -24.83326 -24.23175 -24.02691 -23.21074 -22.07461 -21.59633 -21.12922 -19.86576 -19.49931 -18.74747 -18.46699 -17.92136 -17.66948 -17.27612 -17.01317 -16.71116 -16.39043 -16.25548 -15.75323 -15.73416 -15.61672 -15.45647 -15.00532 -14.83450 -14.78096 -14.67487 -14.48607 -14.43053 -14.13813 -14.04526 -13.80849 -13.67593 -13.40987 -13.14596 -12.98394 -12.79446 -12.71894 -12.60880 -12.53827 -12.27538 -11.97769 -11.84319 -11.65974 -11.63176 -11.54865 -11.43449 -11.22879 -10.94920 -10.92658 -10.46752 -10.32881 -9.32660 -8.82984 -5.02193 -0.33486 0.51173 0.99934 1.10322 1.28398 1.64261 1.69238 1.78144 1.86454 1.99000 2.31295 2.77281 3.16911 3.41013 3.44079 3.54463 3.58617 3.62868 3.69458 3.82856 3.87934 3.97632 4.00181 4.09700 4.23509 4.25693 4.27068 4.27665 4.31692 4.35114 4.43272 4.45037 4.46457 4.58956 4.62451 4.64588 4.71445 4.75076 4.82296 4.88628 4.91126 4.94613 4.96212 4.98985 5.11885 5.17097 5.22738 5.32212 5.37638 5.39774 5.48203 5.51505 5.60691 5.95221 6.14825 6.30684 6.54395 6.77084 7.01169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.322 6.322 3 C 0.456 3.544 4 O -0.505 6.505 5 C 0.200 3.800 6 N -0.721 5.721 7 C 0.585 3.415 8 O -0.479 6.479 9 C 0.018 3.982 10 C -0.100 4.100 11 C -0.116 4.116 12 C -0.051 4.051 13 C -0.146 4.146 14 C -0.088 4.088 15 C -0.068 4.068 16 O -0.541 6.541 17 Si 0.693 3.307 18 C -0.104 4.104 19 C 0.115 3.885 20 N -0.579 5.579 21 C -0.133 4.133 22 C -0.107 4.107 23 C -0.096 4.096 24 H 0.076 0.924 25 C -0.155 4.155 26 C -0.113 4.113 27 C -0.117 4.117 28 H 0.062 0.938 29 H 0.059 0.941 30 H 0.102 0.898 31 H 0.400 0.600 32 H 0.158 0.842 33 H 0.132 0.868 34 H 0.129 0.871 35 H 0.114 0.886 36 H 0.380 0.620 37 H -0.256 1.256 38 H -0.257 1.257 39 H 0.126 0.874 40 H 0.416 0.584 41 H 0.083 0.917 42 H 0.096 0.904 43 H 0.064 0.936 44 H 0.072 0.928 45 H 0.061 0.939 46 H 0.057 0.943 47 H 0.057 0.943 48 H 0.061 0.939 49 H 0.077 0.923 50 H 0.076 0.924 51 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.019 -0.652 -1.620 2.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.237 6.237 3 C 0.297 3.703 4 O -0.392 6.392 5 C 0.113 3.887 6 N -0.377 5.377 7 C 0.371 3.629 8 O -0.351 6.351 9 C -0.091 4.091 10 C -0.126 4.126 11 C -0.121 4.121 12 C -0.069 4.069 13 C -0.165 4.165 14 C -0.090 4.090 15 C -0.179 4.179 16 O -0.346 6.346 17 Si 0.595 3.405 18 C -0.125 4.125 19 C 0.005 3.995 20 N -0.184 5.184 21 C -0.171 4.171 22 C -0.145 4.145 23 C -0.114 4.114 24 H 0.094 0.906 25 C -0.212 4.212 26 C -0.150 4.150 27 C -0.155 4.155 28 H 0.081 0.919 29 H 0.078 0.922 30 H 0.120 0.880 31 H 0.235 0.765 32 H 0.176 0.824 33 H 0.150 0.850 34 H 0.146 0.854 35 H 0.131 0.869 36 H 0.227 0.773 37 H -0.182 1.182 38 H -0.182 1.182 39 H 0.144 0.856 40 H 0.254 0.746 41 H 0.102 0.898 42 H 0.114 0.886 43 H 0.083 0.917 44 H 0.091 0.909 45 H 0.080 0.920 46 H 0.076 0.924 47 H 0.076 0.924 48 H 0.080 0.920 49 H 0.096 0.904 50 H 0.095 0.905 51 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 1.329 -0.824 -0.903 1.806 hybrid contribution 0.390 1.228 -0.437 1.360 sum 1.719 0.404 -1.339 2.216 Atomic orbital electron populations 1.23313 0.76984 1.03854 1.02212 1.86858 1.22680 1.31566 1.82556 1.24020 0.91711 0.82146 0.72413 1.90693 1.66600 1.36574 1.45343 1.20201 0.85416 0.88282 0.94830 1.45935 1.54930 1.04925 1.31904 1.17138 0.80219 0.81199 0.84360 1.90880 1.35311 1.83254 1.25619 1.20075 1.02085 0.95214 0.91771 1.20951 1.01573 0.90167 0.99945 1.18217 1.02855 0.93437 0.97546 1.20378 0.96640 0.93351 0.96571 1.20485 1.00606 0.98701 0.96711 1.20027 0.98922 0.92893 0.97197 1.25075 0.98248 1.11206 0.83370 1.86498 1.33153 1.76707 1.38282 0.94552 0.90228 0.75212 0.80534 1.19855 1.00834 0.95515 0.96264 1.18296 0.99985 0.84132 0.97044 1.41904 1.44838 1.07028 1.24652 1.22033 0.97131 1.05227 0.92685 1.21498 0.94041 0.97199 1.01740 1.21164 1.00436 0.95280 0.94513 0.90571 1.21975 1.01539 0.97743 0.99967 1.21598 0.93701 1.02592 0.97155 1.21829 0.97159 0.94334 1.02188 0.91908 0.92226 0.87992 0.76479 0.82397 0.85039 0.85386 0.86892 0.77278 1.18160 1.18203 0.85577 0.74601 0.89825 0.88554 0.91724 0.90900 0.92040 0.92391 0.92416 0.92000 0.90442 0.90534 0.88084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.11 16 2 O -0.32 -1.15 6.72 -47.36 -0.32 -1.47 16 3 C 0.46 1.47 6.71 36.01 0.24 1.71 16 4 O -0.50 -2.70 15.84 -18.75 -0.30 -3.00 16 5 C 0.20 0.02 0.63 -132.97 -0.08 -0.06 16 6 N -0.72 0.88 4.03 -49.86 -0.20 0.68 16 7 C 0.58 0.62 6.73 -12.68 -0.09 0.54 16 8 O -0.48 -1.86 12.08 -19.27 -0.23 -2.09 16 9 C 0.02 0.01 6.97 -82.29 -0.57 -0.56 16 10 C -0.10 -0.12 10.53 -39.15 -0.41 -0.53 16 11 C -0.12 -0.12 6.16 -106.93 -0.66 -0.78 16 12 C -0.05 0.01 10.06 -39.53 -0.40 -0.39 16 13 C -0.15 0.10 8.59 -39.97 -0.34 -0.24 16 14 C -0.09 0.03 5.40 -104.57 -0.56 -0.53 16 15 C -0.07 0.05 2.81 36.00 0.10 0.16 16 16 O -0.54 0.21 12.76 -35.23 -0.45 -0.24 16 17 Si 0.69 -1.01 29.75 -169.99 -5.06 -6.07 16 18 C -0.10 0.00 9.61 -39.42 -0.38 -0.38 16 19 C 0.12 0.05 7.25 -83.98 -0.61 -0.56 16 20 N -0.58 0.72 6.07 -7.36 -0.04 0.67 16 21 C -0.13 -0.03 4.23 -26.73 -0.11 -0.14 16 22 C -0.11 0.14 5.29 -26.73 -0.14 0.00 16 23 C -0.10 0.21 3.19 -90.62 -0.29 -0.08 16 24 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 25 C -0.16 0.26 8.50 37.16 0.32 0.58 16 26 C -0.11 0.34 5.28 -26.73 -0.14 0.20 16 27 C -0.12 0.17 4.04 -26.73 -0.11 0.06 16 28 H 0.06 0.09 8.13 -51.93 -0.42 -0.33 16 29 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 30 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.40 -1.53 6.37 -40.82 -0.26 -1.79 16 32 H 0.16 0.09 8.06 -52.49 -0.42 -0.33 16 33 H 0.13 -0.27 8.06 -52.49 -0.42 -0.70 16 34 H 0.13 -0.32 4.82 -52.49 -0.25 -0.57 16 35 H 0.11 -0.05 7.96 -51.93 -0.41 -0.46 16 36 H 0.38 -1.55 8.70 45.56 0.40 -1.16 16 37 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 38 H -0.26 -0.22 7.10 56.52 0.40 0.18 16 39 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 40 H 0.42 -1.72 8.12 -40.82 -0.33 -2.05 16 41 H 0.08 0.03 6.43 -51.93 -0.33 -0.31 16 42 H 0.10 0.21 6.16 -51.93 -0.32 -0.11 16 43 H 0.06 -0.07 7.61 -51.93 -0.39 -0.46 16 44 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.06 -0.07 4.81 -51.93 -0.25 -0.31 16 46 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 48 H 0.06 -0.26 6.86 -51.93 -0.36 -0.61 16 49 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 50 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 51 H 0.10 -0.04 6.16 -51.93 -0.32 -0.36 16 LS Contribution 395.43 15.07 5.96 5.96 Total: 0.00 -8.73 395.43 -10.92 -19.65 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: -7.11 Total: -14.20 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -3.18 Total: 0.10 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -0.25 Total: 1.35 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.30 Total: -6.80 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.06 Total: -6.07 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -8.73 -10.92 -19.65 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.842 kcal (2) G-P(sol) polarization free energy of solvation -8.725 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.567 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.923 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.648 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds