Wall clock time and date at job start Sat Mar 6 2021 20:50:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34236 * 116.99701 * 2 1 4 4 O 1.20816 * 120.00234 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99481 * 179.97438 * 3 2 1 6 6 N 1.46498 * 109.47152 * 35.00722 * 5 3 2 7 7 C 1.34777 * 119.99828 * 299.71771 * 6 5 3 8 8 O 1.21583 * 119.99943 * 0.28074 * 7 6 5 9 9 C 1.47659 * 120.00027 * 180.27877 * 7 6 5 10 10 C 1.40164 * 119.97079 * 0.02562 * 9 7 6 11 11 C 1.36356 * 120.66539 * 179.97438 * 10 9 7 12 12 C 1.39323 * 120.23794 * 0.02562 * 11 10 9 13 13 N 1.37402 * 133.25321 * 180.02562 * 12 11 10 14 14 C 1.36860 * 109.98253 * 179.97438 * 13 12 11 15 15 C 1.34192 * 109.96899 * 359.97438 * 14 13 12 16 16 C 1.50694 * 126.53693 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.47219 * 105.02654 * 16 15 14 18 18 Si 1.86296 * 109.47422 * 345.02421 * 16 15 14 19 19 C 1.40913 * 119.64148 * 359.97438 * 12 11 10 20 20 C 1.39190 * 119.97171 * 179.72607 * 9 7 6 21 21 C 1.53000 * 109.47333 * 275.00298 * 5 3 2 22 22 C 1.52996 * 109.47253 * 180.02562 * 21 5 3 23 23 C 1.53003 * 109.47532 * 59.99836 * 22 21 5 24 24 H 1.08990 * 109.47421 * 180.02562 * 23 22 21 25 25 C 1.52999 * 109.46507 * 60.00067 * 23 22 21 26 26 C 1.53000 * 109.46985 * 300.00328 * 23 22 21 27 27 C 1.52996 * 109.46675 * 155.00389 * 5 3 2 28 28 H 1.08995 * 109.47109 * 59.99601 * 1 2 3 29 29 H 1.08994 * 109.46827 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.46873 * 299.99671 * 1 2 3 31 31 H 0.97001 * 120.00384 * 120.00218 * 6 5 3 32 32 H 1.07998 * 119.66728 * 359.95575 * 10 9 7 33 33 H 1.08002 * 119.88030 * 180.02562 * 11 10 9 34 34 H 0.97004 * 125.00465 * 359.97438 * 13 12 11 35 35 H 1.08004 * 125.01358 * 180.02562 * 14 13 12 36 36 H 1.09000 * 109.46811 * 225.02606 * 16 15 14 37 37 H 0.96699 * 114.00155 * 299.99391 * 17 16 15 38 38 H 1.48501 * 109.99892 * 180.02562 * 18 16 15 39 39 H 1.48495 * 109.99958 * 301.32033 * 18 16 15 40 40 H 1.08004 * 120.30398 * 0.02562 * 20 9 7 41 41 H 1.09003 * 109.47049 * 300.00136 * 21 5 3 42 42 H 1.09001 * 109.47192 * 60.00344 * 21 5 3 43 43 H 1.09003 * 109.46851 * 299.99825 * 22 21 5 44 44 H 1.09002 * 109.47575 * 180.02562 * 22 21 5 45 45 H 1.08998 * 109.47127 * 299.99806 * 25 23 22 46 46 H 1.08994 * 109.47504 * 60.00545 * 25 23 22 47 47 H 1.09001 * 109.46739 * 180.02562 * 25 23 22 48 48 H 1.09003 * 109.47049 * 299.99797 * 26 23 22 49 49 H 1.09001 * 109.47192 * 179.97438 * 26 23 22 50 50 H 1.09000 * 109.47665 * 299.99816 * 27 5 3 51 51 H 1.09003 * 109.47345 * 60.00086 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.1135 0.1705 -0.7913 7 6 3.8588 -1.1044 -0.4360 8 8 3.1707 -1.3378 0.5388 9 6 4.4153 -2.2176 -1.2306 10 6 5.2089 -1.9477 -2.3540 11 6 5.7305 -2.9647 -3.0975 12 6 5.4791 -4.2898 -2.7481 13 7 5.8579 -5.4944 -3.2897 14 6 5.3351 -6.5231 -2.5538 15 6 4.6153 -6.0357 -1.5315 16 6 3.8775 -6.8380 -0.4908 17 8 4.6008 -6.8000 0.7410 18 14 3.7198 -8.6034 -1.0643 19 6 4.6828 -4.5742 -1.6209 20 6 4.1566 -3.5340 -0.8597 21 6 4.0817 1.1762 1.4378 22 6 5.6095 1.2569 1.4384 23 6 6.0503 2.5893 0.8289 24 1 7.1387 2.6465 0.8290 25 6 5.4784 3.7423 1.6561 26 6 5.5349 2.6879 -0.6083 27 6 4.0074 2.6070 -0.6091 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 4.6625 0.3567 -1.5690 32 1 5.4091 -0.9239 -2.6336 33 1 6.3406 -2.7423 -3.9605 34 1 6.4139 -5.6001 -4.0775 35 1 5.4810 -7.5724 -2.7643 36 1 2.8843 -6.4142 -0.3422 37 1 5.4955 -7.1622 0.6831 38 1 2.9934 -9.4049 -0.0468 39 1 2.9971 -8.6538 -2.3605 40 1 3.5493 -3.7465 0.0077 41 1 3.6746 1.9980 2.0270 42 1 3.7675 0.2272 1.8721 43 1 6.0170 0.4354 0.8491 44 1 5.9768 1.1862 2.4623 45 1 4.3899 3.6849 1.6556 46 1 5.8455 3.6721 2.6800 47 1 5.7919 4.6916 1.2217 48 1 5.9423 1.8664 -1.1975 49 1 5.8485 3.6373 -1.0423 50 1 3.6403 2.6774 -1.6330 51 1 3.6003 3.4288 -0.0199 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13287722.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:36 Heat of formation + Delta-G solvation = -85.247998 kcal Electronic energy + Delta-G solvation = -35903.922060 eV Core-core repulsion = 31349.489045 eV Total energy + Delta-G solvation = -4554.433016 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.55919 -42.22579 -40.39079 -39.44931 -37.87826 -37.38565 -37.12888 -35.40446 -33.27034 -32.24388 -31.96404 -30.66905 -30.12490 -28.87344 -27.70668 -26.47854 -25.05868 -24.15423 -23.86847 -23.47390 -21.89357 -21.17101 -20.75657 -19.52915 -19.33300 -18.66047 -18.44789 -17.67718 -17.43867 -17.22806 -17.07077 -16.64823 -16.29512 -16.16345 -15.64426 -15.50941 -15.47042 -15.28300 -14.89658 -14.84243 -14.74496 -14.65351 -14.31347 -14.06267 -14.04687 -13.81603 -13.67831 -13.57149 -13.46897 -13.25032 -12.85894 -12.67148 -12.62352 -12.51787 -12.28391 -12.18051 -12.11203 -11.87205 -11.67978 -11.49664 -11.39358 -11.26613 -11.05106 -10.78035 -10.54817 -10.32164 -10.04825 -9.32082 -8.82563 -5.08897 -0.02883 0.19542 1.25935 1.30404 1.47201 1.64678 1.84223 1.97006 1.99793 2.11249 2.15747 3.00454 3.35220 3.57584 3.58783 3.60565 3.69857 3.74352 3.80335 3.85566 3.97809 4.04266 4.07661 4.12987 4.24592 4.36197 4.36767 4.41290 4.41606 4.44517 4.47261 4.51583 4.58291 4.59649 4.75803 4.77563 4.79243 4.82746 4.87161 4.96676 5.02402 5.05609 5.11719 5.17727 5.25147 5.25610 5.32585 5.39728 5.42869 5.50047 5.52956 5.60452 5.62327 5.98407 6.35432 6.53951 6.69115 6.92725 7.39130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.320 6.320 3 C 0.457 3.543 4 O -0.509 6.509 5 C 0.200 3.800 6 N -0.721 5.721 7 C 0.564 3.436 8 O -0.500 6.500 9 C -0.164 4.164 10 C -0.068 4.068 11 C -0.134 4.134 12 C 0.118 3.882 13 N -0.586 5.586 14 C 0.061 3.939 15 C -0.192 4.192 16 C -0.034 4.034 17 O -0.539 6.539 18 Si 0.686 3.314 19 C -0.102 4.102 20 C 0.008 3.992 21 C -0.132 4.132 22 C -0.107 4.107 23 C -0.095 4.095 24 H 0.075 0.925 25 C -0.155 4.155 26 C -0.113 4.113 27 C -0.117 4.117 28 H 0.058 0.942 29 H 0.100 0.900 30 H 0.061 0.939 31 H 0.403 0.597 32 H 0.126 0.874 33 H 0.127 0.873 34 H 0.421 0.579 35 H 0.178 0.822 36 H 0.112 0.888 37 H 0.376 0.624 38 H -0.254 1.254 39 H -0.256 1.256 40 H 0.139 0.861 41 H 0.080 0.920 42 H 0.096 0.904 43 H 0.066 0.934 44 H 0.070 0.930 45 H 0.061 0.939 46 H 0.056 0.944 47 H 0.056 0.944 48 H 0.064 0.936 49 H 0.075 0.925 50 H 0.075 0.925 51 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.923 -2.912 -5.216 9.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.234 6.234 3 C 0.298 3.702 4 O -0.397 6.397 5 C 0.112 3.888 6 N -0.377 5.377 7 C 0.353 3.647 8 O -0.374 6.374 9 C -0.168 4.168 10 C -0.088 4.088 11 C -0.154 4.154 12 C 0.009 3.991 13 N -0.188 5.188 14 C -0.065 4.065 15 C -0.200 4.200 16 C -0.145 4.145 17 O -0.344 6.344 18 Si 0.588 3.412 19 C -0.107 4.107 20 C -0.012 4.012 21 C -0.170 4.170 22 C -0.145 4.145 23 C -0.113 4.113 24 H 0.094 0.906 25 C -0.212 4.212 26 C -0.150 4.150 27 C -0.154 4.154 28 H 0.077 0.923 29 H 0.118 0.882 30 H 0.080 0.920 31 H 0.240 0.760 32 H 0.144 0.856 33 H 0.145 0.855 34 H 0.259 0.741 35 H 0.195 0.805 36 H 0.130 0.870 37 H 0.223 0.777 38 H -0.179 1.179 39 H -0.181 1.181 40 H 0.156 0.844 41 H 0.098 0.902 42 H 0.114 0.886 43 H 0.085 0.915 44 H 0.089 0.911 45 H 0.079 0.921 46 H 0.075 0.925 47 H 0.075 0.925 48 H 0.083 0.917 49 H 0.094 0.906 50 H 0.094 0.906 51 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 5.122 -3.247 -4.603 7.614 hybrid contribution -0.001 0.724 -0.934 1.182 sum 5.121 -2.523 -5.536 7.953 Atomic orbital electron populations 1.23283 0.77361 1.03663 1.02085 1.86890 1.22348 1.31629 1.82509 1.24118 0.91878 0.82017 0.72170 1.90675 1.66730 1.36632 1.45641 1.20131 0.85240 0.88578 0.94838 1.45948 1.55111 1.04764 1.31913 1.18118 0.79919 0.82169 0.84539 1.90796 1.36165 1.83809 1.26655 1.19515 1.05058 0.93241 0.98994 1.20579 0.95886 0.98593 0.93758 1.19655 1.04689 0.88755 1.02329 1.18428 0.98466 0.87186 0.95025 1.41734 1.45760 1.03928 1.27372 1.21677 0.98360 0.93144 0.93365 1.20754 1.06689 0.92162 1.00350 1.24395 0.96561 1.08236 0.85302 1.86537 1.31138 1.86417 1.30335 0.95342 0.89522 0.76451 0.79903 1.18925 1.02191 0.92844 0.96737 1.20681 0.94164 0.89448 0.96874 1.22018 0.97079 1.05045 0.92893 1.21491 0.94124 0.97239 1.01598 1.21154 1.00334 0.95264 0.94579 0.90641 1.21974 1.01566 0.97760 0.99912 1.21589 0.93768 1.02568 0.97116 1.21802 0.97132 0.94432 1.02080 0.92321 0.88199 0.92017 0.76001 0.85586 0.85517 0.74144 0.80500 0.87029 0.77664 1.17861 1.18114 0.84362 0.90169 0.88583 0.91485 0.91110 0.92061 0.92493 0.92514 0.91721 0.90625 0.90619 0.88369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.09 10.56 101.05 1.07 1.15 16 2 O -0.32 -1.66 6.74 -47.37 -0.32 -1.98 16 3 C 0.46 2.13 6.71 36.01 0.24 2.38 16 4 O -0.51 -3.37 15.84 -18.74 -0.30 -3.67 16 5 C 0.20 0.30 0.63 -132.97 -0.08 0.22 16 6 N -0.72 -0.26 3.98 -49.68 -0.20 -0.46 16 7 C 0.56 1.58 6.70 -12.41 -0.08 1.50 16 8 O -0.50 -2.93 11.58 -19.19 -0.22 -3.15 16 9 C -0.16 -0.30 5.87 -104.97 -0.62 -0.92 16 10 C -0.07 0.04 9.46 -39.54 -0.37 -0.33 16 11 C -0.13 0.12 10.00 -39.86 -0.40 -0.27 16 12 C 0.12 0.02 7.27 -83.95 -0.61 -0.59 16 13 N -0.59 1.37 6.05 -10.61 -0.06 1.30 16 14 C 0.06 -0.14 10.43 -16.73 -0.17 -0.32 16 15 C -0.19 -0.04 5.58 -102.69 -0.57 -0.61 16 16 C -0.03 0.00 3.06 36.00 0.11 0.11 16 17 O -0.54 -0.46 12.88 -35.23 -0.45 -0.92 16 18 Si 0.69 -1.17 30.76 -169.99 -5.23 -6.40 16 19 C -0.10 -0.20 6.34 -105.16 -0.67 -0.87 16 20 C 0.01 0.02 9.64 -38.86 -0.37 -0.35 16 21 C -0.13 -0.21 4.22 -26.73 -0.11 -0.33 16 22 C -0.11 0.02 5.29 -26.73 -0.14 -0.12 16 23 C -0.09 0.13 3.20 -90.62 -0.29 -0.16 16 24 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 25 C -0.16 0.13 8.50 37.16 0.32 0.45 16 26 C -0.11 0.23 5.28 -26.75 -0.14 0.09 16 27 C -0.12 0.03 4.04 -26.75 -0.11 -0.08 16 28 H 0.06 0.14 8.13 -51.93 -0.42 -0.28 16 29 H 0.10 0.11 8.14 -51.93 -0.42 -0.31 16 30 H 0.06 0.17 8.13 -51.93 -0.42 -0.25 16 31 H 0.40 -0.91 5.32 -40.82 -0.22 -1.12 16 32 H 0.13 -0.44 6.36 -52.49 -0.33 -0.77 16 33 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 34 H 0.42 -2.25 8.96 -40.82 -0.37 -2.61 16 35 H 0.18 -1.05 6.35 -52.48 -0.33 -1.39 16 36 H 0.11 0.14 7.96 -51.93 -0.41 -0.27 16 37 H 0.38 -1.25 8.70 45.56 0.40 -0.85 16 38 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 39 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 40 H 0.14 0.57 7.64 -52.48 -0.40 0.17 16 41 H 0.08 0.13 6.43 -51.93 -0.33 -0.20 16 42 H 0.10 0.37 6.15 -51.93 -0.32 0.05 16 43 H 0.07 0.01 7.61 -51.93 -0.39 -0.39 16 44 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 45 H 0.06 0.00 4.81 -51.93 -0.25 -0.25 16 46 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 47 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 48 H 0.06 -0.21 6.86 -51.93 -0.36 -0.56 16 49 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 50 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 51 H 0.10 0.07 6.16 -51.93 -0.32 -0.25 16 LS Contribution 395.45 15.07 5.96 5.96 Total: 0.00 -10.50 395.45 -10.90 -21.40 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -7.07 Total: -13.04 kcal Atomic # 6 Polarization: 3.96 SS G_CDS: -3.01 Total: 0.94 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.26 Total: 0.84 kcal Atomic # 8 Polarization: -8.41 SS G_CDS: -1.29 Total: -9.71 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.23 Total: -6.40 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -10.50 -10.90 -21.40 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13287722.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.847 kcal (2) G-P(sol) polarization free energy of solvation -10.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.343 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.401 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.248 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds