Wall clock time and date at job start Sat Mar 6 2021 20:50:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34229 * 116.99851 * 2 1 4 4 O 1.20830 * 120.00174 * 0.02562 * 3 2 1 5 5 C 1.50706 * 120.00259 * 180.02562 * 3 2 1 6 6 N 1.46497 * 109.47047 * 34.99930 * 5 3 2 7 7 C 1.34770 * 120.00415 * 300.00663 * 6 5 3 8 8 O 1.21626 * 119.99925 * 359.97438 * 7 6 5 9 9 C 1.47261 * 120.00476 * 179.97438 * 7 6 5 10 10 C 1.36766 * 126.93882 * 0.02562 * 9 7 6 11 11 N 1.34657 * 108.39898 * 180.02562 * 10 9 7 12 12 C 1.46499 * 124.85469 * 180.02562 * 11 10 9 13 13 C 1.36447 * 110.29526 * 0.02562 * 11 10 9 14 14 C 1.50709 * 125.57096 * 180.02562 * 13 11 10 15 15 O 1.42897 * 109.47118 * 329.99830 * 14 13 11 16 16 Si 1.86301 * 109.46885 * 210.00110 * 14 13 11 17 17 C 1.34486 * 108.85605 * 359.71112 * 13 11 10 18 18 C 1.52997 * 109.47051 * 275.00191 * 5 3 2 19 19 C 1.52996 * 109.47131 * 179.97438 * 18 5 3 20 20 C 1.53002 * 109.46972 * 60.00459 * 19 18 5 21 21 H 1.09002 * 109.47070 * 179.97438 * 20 19 18 22 22 C 1.52997 * 109.47415 * 59.99860 * 20 19 18 23 23 C 1.52997 * 109.46817 * 299.99733 * 20 19 18 24 24 C 1.52999 * 109.46957 * 155.00496 * 5 3 2 25 25 H 1.08992 * 109.47307 * 299.99364 * 1 2 3 26 26 H 1.09004 * 109.47247 * 59.99970 * 1 2 3 27 27 H 1.09003 * 109.46702 * 179.97438 * 1 2 3 28 28 H 0.97000 * 119.99797 * 119.99640 * 6 5 3 29 29 H 1.08006 * 125.80564 * 0.02562 * 10 9 7 30 30 H 1.09006 * 109.46805 * 89.97763 * 12 11 10 31 31 H 1.09004 * 109.47353 * 209.97532 * 12 11 10 32 32 H 1.08995 * 109.47151 * 329.98230 * 12 11 10 33 33 H 1.08997 * 109.46843 * 89.99687 * 14 13 11 34 34 H 0.96697 * 114.00433 * 180.02562 * 15 14 13 35 35 H 1.48501 * 109.99937 * 298.67899 * 16 14 13 36 36 H 1.48498 * 110.00139 * 59.99868 * 16 14 13 37 37 H 1.08003 * 126.83041 * 180.26430 * 17 13 11 38 38 H 1.09001 * 109.47289 * 59.99688 * 18 5 3 39 39 H 1.09000 * 109.47611 * 300.00260 * 18 5 3 40 40 H 1.08996 * 109.47452 * 300.00000 * 19 18 5 41 41 H 1.09000 * 109.47054 * 180.02562 * 19 18 5 42 42 H 1.09002 * 109.47045 * 300.00068 * 22 20 19 43 43 H 1.09000 * 109.47140 * 59.99976 * 22 20 19 44 44 H 1.08998 * 109.47624 * 180.02562 * 22 20 19 45 45 H 1.09001 * 109.47502 * 300.00518 * 23 20 19 46 46 H 1.09001 * 109.47289 * 180.02562 * 23 20 19 47 47 H 1.08993 * 109.47839 * 60.00178 * 24 5 3 48 48 H 1.09000 * 109.47160 * 299.99740 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5664 1.2750 -0.0006 6 7 4.1130 0.1709 -0.7932 7 6 3.8539 -1.1041 -0.4415 8 8 3.1667 -1.3381 0.5343 9 6 4.4029 -2.2139 -1.2386 10 6 5.1877 -2.1150 -2.3543 11 7 5.4758 -3.3586 -2.7830 12 6 6.2968 -3.6708 -3.9554 13 6 4.8938 -4.2864 -1.9692 14 6 4.9933 -5.7813 -2.1324 15 8 5.1407 -6.1004 -3.5175 16 14 3.4465 -6.5824 -1.4718 17 6 4.2225 -3.6489 -0.9936 18 6 4.0828 1.1758 1.4362 19 6 5.6107 1.2554 1.4355 20 6 6.0518 2.5876 0.8259 21 1 7.1403 2.6445 0.8259 22 6 5.4814 3.7410 1.6537 23 6 5.5353 2.6867 -0.6108 24 6 4.0069 2.6074 -0.6100 25 1 -0.3633 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 4.6613 0.3575 -1.5713 29 1 5.5199 -1.1957 -2.8137 30 1 7.3412 -3.7568 -3.6552 31 1 5.9651 -4.6135 -4.3907 32 1 6.1952 -2.8745 -4.6926 33 1 5.8578 -6.1502 -1.5805 34 1 5.2106 -7.0479 -3.6976 35 1 3.2985 -6.2844 -0.0246 36 1 2.2606 -6.0875 -2.2161 37 1 3.6604 -4.1031 -0.1911 38 1 3.7689 0.2266 1.8704 39 1 3.6761 1.9972 2.0261 40 1 6.0171 0.4337 0.8459 41 1 5.9786 1.1843 2.4591 42 1 4.3928 3.6843 1.6541 43 1 5.8493 3.6703 2.6773 44 1 5.7952 4.6901 1.2192 45 1 5.9416 1.8650 -1.2006 46 1 5.8499 3.6356 -1.0453 47 1 3.6002 3.4289 -0.0203 48 1 3.6389 2.6781 -1.6336 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:44 Heat of formation + Delta-G solvation = -92.640651 kcal Electronic energy + Delta-G solvation = -31625.388300 eV Core-core repulsion = 27455.313136 eV Total energy + Delta-G solvation = -4170.075164 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.55291 -42.06459 -40.18408 -39.04719 -37.84707 -37.13116 -35.29163 -33.81616 -32.33571 -31.95715 -30.94450 -28.88363 -27.78367 -27.50185 -26.22005 -24.46081 -23.94134 -23.61000 -21.47094 -20.98663 -20.36711 -19.49196 -18.70985 -18.49966 -18.34851 -17.70765 -17.13857 -16.88358 -16.61704 -16.58843 -15.99810 -15.71093 -15.54675 -15.41950 -14.95849 -14.86323 -14.75159 -14.51012 -14.29881 -14.00653 -13.69707 -13.62246 -13.54544 -13.40376 -13.29371 -13.25342 -13.06012 -12.83835 -12.66315 -12.64163 -12.53747 -12.11793 -11.87195 -11.66979 -11.47279 -11.38787 -11.25874 -11.03689 -10.72911 -10.49369 -9.99835 -9.55914 -9.18498 -5.02498 0.79385 1.02691 1.28979 1.42720 1.69603 1.89707 1.93542 2.08508 2.24787 2.76488 3.01280 3.39004 3.58805 3.61676 3.71777 3.80805 3.84068 3.97572 4.01254 4.13693 4.20905 4.22742 4.26440 4.33454 4.38134 4.41737 4.42853 4.45952 4.51664 4.59762 4.71961 4.75934 4.78471 4.83517 4.86969 4.93341 4.97078 4.98583 5.06602 5.12145 5.19583 5.26125 5.34338 5.47021 5.50514 5.64556 5.68403 5.99379 6.15254 6.38353 6.63435 6.95357 7.52667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.318 6.318 3 C 0.457 3.543 4 O -0.510 6.510 5 C 0.201 3.799 6 N -0.723 5.723 7 C 0.592 3.408 8 O -0.505 6.505 9 C -0.221 4.221 10 C 0.048 3.952 11 N -0.420 5.420 12 C 0.056 3.944 13 C 0.027 3.973 14 C -0.046 4.046 15 O -0.552 6.552 16 Si 0.707 3.293 17 C -0.144 4.144 18 C -0.132 4.132 19 C -0.106 4.106 20 C -0.095 4.095 21 H 0.075 0.925 22 C -0.155 4.155 23 C -0.112 4.112 24 C -0.116 4.116 25 H 0.061 0.939 26 H 0.058 0.942 27 H 0.099 0.901 28 H 0.401 0.599 29 H 0.171 0.829 30 H 0.072 0.928 31 H 0.118 0.882 32 H 0.080 0.920 33 H 0.079 0.921 34 H 0.387 0.613 35 H -0.251 1.251 36 H -0.252 1.252 37 H 0.149 0.851 38 H 0.095 0.905 39 H 0.079 0.921 40 H 0.066 0.934 41 H 0.069 0.931 42 H 0.061 0.939 43 H 0.056 0.944 44 H 0.056 0.944 45 H 0.064 0.936 46 H 0.075 0.925 47 H 0.098 0.902 48 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.759 -4.408 -4.376 8.471 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.232 6.232 3 C 0.298 3.702 4 O -0.398 6.398 5 C 0.113 3.887 6 N -0.379 5.379 7 C 0.380 3.620 8 O -0.379 6.379 9 C -0.231 4.231 10 C -0.089 4.089 11 N -0.094 5.094 12 C -0.085 4.085 13 C -0.083 4.083 14 C -0.155 4.155 15 O -0.360 6.360 16 Si 0.606 3.394 17 C -0.168 4.168 18 C -0.170 4.170 19 C -0.144 4.144 20 C -0.113 4.113 21 H 0.093 0.907 22 C -0.212 4.212 23 C -0.150 4.150 24 C -0.154 4.154 25 H 0.080 0.920 26 H 0.077 0.923 27 H 0.117 0.883 28 H 0.236 0.764 29 H 0.188 0.812 30 H 0.090 0.910 31 H 0.136 0.864 32 H 0.098 0.902 33 H 0.097 0.903 34 H 0.236 0.764 35 H -0.176 1.176 36 H -0.177 1.177 37 H 0.167 0.833 38 H 0.114 0.886 39 H 0.098 0.902 40 H 0.085 0.915 41 H 0.088 0.912 42 H 0.080 0.920 43 H 0.075 0.925 44 H 0.075 0.925 45 H 0.082 0.918 46 H 0.093 0.907 47 H 0.116 0.884 48 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 4.401 -3.647 -3.629 6.770 hybrid contribution 0.438 0.798 -0.519 1.048 sum 4.839 -2.849 -4.148 6.981 Atomic orbital electron populations 1.23280 0.77461 1.03621 1.02047 1.86912 1.22269 1.31575 1.82441 1.24146 0.91925 0.82008 0.72130 1.90674 1.66767 1.36638 1.45746 1.20103 0.85224 0.88578 0.94800 1.45882 1.55355 1.04718 1.31920 1.17286 0.79379 0.81265 0.84036 1.90780 1.36537 1.83765 1.26863 1.20209 1.09213 0.93311 1.00369 1.21932 1.01263 0.88426 0.97247 1.43472 1.38388 1.04822 1.22716 1.22512 0.94881 1.05193 0.85866 1.19764 1.03348 0.89711 0.95442 1.24408 1.11597 0.92141 0.87368 1.86294 1.96797 1.30226 1.22637 0.95679 0.75585 0.88242 0.79914 1.21572 1.03267 0.91565 1.00395 1.22009 0.97021 1.04982 0.92967 1.21482 0.94179 0.97210 1.01519 1.21151 1.00272 0.95279 0.94602 0.90708 1.21975 1.01596 0.97748 0.99894 1.21594 0.93804 1.02489 0.97087 1.21807 0.97058 0.94463 1.02045 0.92026 0.92340 0.88260 0.76370 0.81219 0.90964 0.86400 0.90173 0.90298 0.76371 1.17603 1.17670 0.83312 0.88629 0.90231 0.91507 0.91185 0.92043 0.92507 0.92518 0.91777 0.90682 0.88400 0.90674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.10 10.56 101.05 1.07 1.17 16 2 O -0.32 -1.90 6.72 -47.36 -0.32 -2.22 16 3 C 0.46 2.41 6.71 36.01 0.24 2.65 16 4 O -0.51 -3.62 15.84 -18.75 -0.30 -3.92 16 5 C 0.20 0.42 0.63 -132.97 -0.08 0.33 16 6 N -0.72 -0.77 4.02 -49.80 -0.20 -0.97 16 7 C 0.59 2.35 6.74 -12.60 -0.08 2.27 16 8 O -0.50 -3.63 12.21 -19.25 -0.24 -3.87 16 9 C -0.22 -0.71 6.29 -103.36 -0.65 -1.36 16 10 C 0.05 0.02 10.83 -16.85 -0.18 -0.16 16 11 N -0.42 -0.36 3.09 -119.89 -0.37 -0.73 16 12 C 0.06 -0.11 10.71 59.85 0.64 0.53 16 13 C 0.03 0.06 6.16 -81.86 -0.50 -0.45 16 14 C -0.05 0.05 2.97 36.01 0.11 0.15 16 15 O -0.55 1.32 9.68 -35.23 -0.34 0.98 16 16 Si 0.71 -0.82 31.24 -169.99 -5.31 -6.13 16 17 C -0.14 -0.57 9.50 -37.50 -0.36 -0.93 16 18 C -0.13 -0.28 4.23 -26.73 -0.11 -0.39 16 19 C -0.11 -0.02 5.29 -26.73 -0.14 -0.17 16 20 C -0.09 0.10 3.19 -90.62 -0.29 -0.19 16 21 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 22 C -0.16 0.09 8.50 37.16 0.32 0.41 16 23 C -0.11 0.20 5.28 -26.71 -0.14 0.06 16 24 C -0.12 -0.01 4.04 -26.71 -0.11 -0.12 16 25 H 0.06 0.20 8.13 -51.93 -0.42 -0.22 16 26 H 0.06 0.17 8.13 -51.93 -0.42 -0.25 16 27 H 0.10 0.18 8.14 -51.93 -0.42 -0.24 16 28 H 0.40 -0.70 6.26 -40.82 -0.26 -0.96 16 29 H 0.17 -0.55 7.45 -52.48 -0.39 -0.95 16 30 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.12 -0.19 5.13 -51.93 -0.27 -0.46 16 32 H 0.08 -0.28 8.13 -51.93 -0.42 -0.71 16 33 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 34 H 0.39 -2.77 8.74 45.56 0.40 -2.38 16 35 H -0.25 -0.45 6.89 56.52 0.39 -0.06 16 36 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 37 H 0.15 0.67 6.76 -52.48 -0.35 0.32 16 38 H 0.10 0.43 6.16 -51.93 -0.32 0.11 16 39 H 0.08 0.16 6.43 -51.93 -0.33 -0.17 16 40 H 0.07 0.04 7.60 -51.93 -0.39 -0.36 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 42 H 0.06 0.01 4.81 -51.93 -0.25 -0.24 16 43 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 44 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 45 H 0.06 -0.18 6.86 -51.93 -0.36 -0.54 16 46 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.10 0.10 6.16 -51.93 -0.32 -0.22 16 48 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 LS Contribution 368.29 15.07 5.55 5.55 Total: 0.00 -10.37 368.29 -8.92 -19.29 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -7.12 Total: -11.79 kcal Atomic # 6 Polarization: 4.08 SS G_CDS: -0.28 Total: 3.80 kcal Atomic # 7 Polarization: -1.13 SS G_CDS: -0.57 Total: -1.70 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -1.19 Total: -9.03 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.31 Total: -6.13 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -10.37 -8.92 -19.29 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.346 kcal (2) G-P(sol) polarization free energy of solvation -10.373 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.922 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.295 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds