Wall clock time and date at job start Sat Mar 6 2021 20:50:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34229 * 116.99851 * 2 1 4 4 O 1.20830 * 120.00174 * 0.02562 * 3 2 1 5 5 C 1.50706 * 120.00259 * 180.02562 * 3 2 1 6 6 N 1.46497 * 109.47047 * 34.99930 * 5 3 2 7 7 C 1.34770 * 120.00415 * 300.00663 * 6 5 3 8 8 O 1.21626 * 119.99925 * 359.97438 * 7 6 5 9 9 C 1.47261 * 120.00476 * 179.97438 * 7 6 5 10 10 C 1.36766 * 126.93882 * 0.02562 * 9 7 6 11 11 N 1.34657 * 108.39898 * 180.02562 * 10 9 7 12 12 C 1.46499 * 124.85469 * 180.02562 * 11 10 9 13 13 C 1.36447 * 110.29526 * 0.02562 * 11 10 9 14 14 C 1.50709 * 125.57096 * 180.02562 * 13 11 10 15 15 O 1.42897 * 109.47118 * 329.99830 * 14 13 11 16 16 Si 1.86301 * 109.46885 * 210.00110 * 14 13 11 17 17 C 1.34486 * 108.85605 * 359.71112 * 13 11 10 18 18 C 1.52997 * 109.47051 * 275.00191 * 5 3 2 19 19 C 1.52996 * 109.47131 * 179.97438 * 18 5 3 20 20 C 1.53002 * 109.46972 * 60.00459 * 19 18 5 21 21 H 1.09002 * 109.47070 * 179.97438 * 20 19 18 22 22 C 1.52997 * 109.47415 * 59.99860 * 20 19 18 23 23 C 1.52997 * 109.46817 * 299.99733 * 20 19 18 24 24 C 1.52999 * 109.46957 * 155.00496 * 5 3 2 25 25 H 1.08992 * 109.47307 * 299.99364 * 1 2 3 26 26 H 1.09004 * 109.47247 * 59.99970 * 1 2 3 27 27 H 1.09003 * 109.46702 * 179.97438 * 1 2 3 28 28 H 0.97000 * 119.99797 * 119.99640 * 6 5 3 29 29 H 1.08006 * 125.80564 * 0.02562 * 10 9 7 30 30 H 1.09006 * 109.46805 * 89.97763 * 12 11 10 31 31 H 1.09004 * 109.47353 * 209.97532 * 12 11 10 32 32 H 1.08995 * 109.47151 * 329.98230 * 12 11 10 33 33 H 1.08997 * 109.46843 * 89.99687 * 14 13 11 34 34 H 0.96697 * 114.00433 * 180.02562 * 15 14 13 35 35 H 1.48501 * 109.99937 * 298.67899 * 16 14 13 36 36 H 1.48498 * 110.00139 * 59.99868 * 16 14 13 37 37 H 1.08003 * 126.83041 * 180.26430 * 17 13 11 38 38 H 1.09001 * 109.47289 * 59.99688 * 18 5 3 39 39 H 1.09000 * 109.47611 * 300.00260 * 18 5 3 40 40 H 1.08996 * 109.47452 * 300.00000 * 19 18 5 41 41 H 1.09000 * 109.47054 * 180.02562 * 19 18 5 42 42 H 1.09002 * 109.47045 * 300.00068 * 22 20 19 43 43 H 1.09000 * 109.47140 * 59.99976 * 22 20 19 44 44 H 1.08998 * 109.47624 * 180.02562 * 22 20 19 45 45 H 1.09001 * 109.47502 * 300.00518 * 23 20 19 46 46 H 1.09001 * 109.47289 * 180.02562 * 23 20 19 47 47 H 1.08993 * 109.47839 * 60.00178 * 24 5 3 48 48 H 1.09000 * 109.47160 * 299.99740 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5664 1.2750 -0.0006 6 7 4.1130 0.1709 -0.7932 7 6 3.8539 -1.1041 -0.4415 8 8 3.1667 -1.3381 0.5343 9 6 4.4029 -2.2139 -1.2386 10 6 5.1877 -2.1150 -2.3543 11 7 5.4758 -3.3586 -2.7830 12 6 6.2968 -3.6708 -3.9554 13 6 4.8938 -4.2864 -1.9692 14 6 4.9933 -5.7813 -2.1324 15 8 5.1407 -6.1004 -3.5175 16 14 3.4465 -6.5824 -1.4718 17 6 4.2225 -3.6489 -0.9936 18 6 4.0828 1.1758 1.4362 19 6 5.6107 1.2554 1.4355 20 6 6.0518 2.5876 0.8259 21 1 7.1403 2.6445 0.8259 22 6 5.4814 3.7410 1.6537 23 6 5.5353 2.6867 -0.6108 24 6 4.0069 2.6074 -0.6100 25 1 -0.3633 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 4.6613 0.3575 -1.5713 29 1 5.5199 -1.1957 -2.8137 30 1 7.3412 -3.7568 -3.6552 31 1 5.9651 -4.6135 -4.3907 32 1 6.1952 -2.8745 -4.6926 33 1 5.8578 -6.1502 -1.5805 34 1 5.2106 -7.0479 -3.6976 35 1 3.2985 -6.2844 -0.0246 36 1 2.2606 -6.0875 -2.2161 37 1 3.6604 -4.1031 -0.1911 38 1 3.7689 0.2266 1.8704 39 1 3.6761 1.9972 2.0261 40 1 6.0171 0.4337 0.8459 41 1 5.9786 1.1843 2.4591 42 1 4.3928 3.6843 1.6541 43 1 5.8493 3.6703 2.6773 44 1 5.7952 4.6901 1.2192 45 1 5.9416 1.8650 -1.2006 46 1 5.8499 3.6356 -1.0453 47 1 3.6002 3.4289 -0.0203 48 1 3.6389 2.6781 -1.6336 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:42 Heat of formation + Delta-G solvation = -91.737964 kcal Electronic energy + Delta-G solvation = -31625.349157 eV Core-core repulsion = 27455.313136 eV Total energy + Delta-G solvation = -4170.036020 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.69831 -42.24248 -40.48842 -39.22552 -37.68682 -37.54409 -35.47361 -33.84433 -32.44363 -31.99253 -30.99315 -29.12306 -27.84274 -27.46382 -26.21587 -24.60924 -24.03710 -23.72993 -21.69183 -21.13945 -20.43339 -19.61953 -18.88752 -18.49087 -18.31708 -18.03664 -17.49276 -16.98152 -16.72690 -16.59600 -16.11112 -15.63724 -15.52449 -15.43531 -15.13426 -14.98219 -14.93721 -14.66710 -14.55353 -14.05722 -13.83135 -13.72820 -13.66567 -13.33734 -13.32633 -13.30060 -13.11169 -13.04446 -12.72051 -12.65553 -12.61493 -12.12349 -11.95602 -11.87837 -11.86279 -11.41100 -11.26206 -11.16357 -10.79171 -10.60211 -10.24382 -9.66851 -9.25240 -5.02111 0.68977 0.90279 0.96122 1.39533 1.63994 1.65843 1.91539 2.07036 2.11479 2.54002 3.17619 3.28068 3.51882 3.60653 3.65470 3.83552 3.90292 3.97209 3.98074 4.06147 4.09629 4.14581 4.22819 4.31874 4.34359 4.38740 4.43519 4.47363 4.50591 4.52890 4.57009 4.72197 4.77143 4.82350 4.84710 4.88496 5.01760 5.05401 5.06789 5.09112 5.19013 5.26595 5.28739 5.34255 5.37939 5.52930 5.53430 5.90561 6.18815 6.52556 6.56899 6.84456 7.32014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.334 6.334 3 C 0.449 3.551 4 O -0.535 6.535 5 C 0.204 3.796 6 N -0.706 5.706 7 C 0.591 3.409 8 O -0.548 6.548 9 C -0.253 4.253 10 C 0.069 3.931 11 N -0.421 5.421 12 C 0.051 3.949 13 C 0.020 3.980 14 C -0.039 4.039 15 O -0.556 6.556 16 Si 0.798 3.202 17 C -0.184 4.184 18 C -0.128 4.128 19 C -0.100 4.100 20 C -0.090 4.090 21 H 0.089 0.911 22 C -0.156 4.156 23 C -0.107 4.107 24 C -0.111 4.111 25 H 0.059 0.941 26 H 0.063 0.937 27 H 0.112 0.888 28 H 0.417 0.583 29 H 0.213 0.787 30 H 0.086 0.914 31 H 0.116 0.884 32 H 0.101 0.899 33 H 0.104 0.896 34 H 0.409 0.591 35 H -0.301 1.301 36 H -0.312 1.312 37 H 0.125 0.875 38 H 0.066 0.934 39 H 0.074 0.926 40 H 0.067 0.933 41 H 0.068 0.932 42 H 0.048 0.952 43 H 0.053 0.947 44 H 0.064 0.936 45 H 0.082 0.918 46 H 0.090 0.910 47 H 0.087 0.913 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.500 -4.198 -6.749 11.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.248 6.248 3 C 0.292 3.708 4 O -0.424 6.424 5 C 0.116 3.884 6 N -0.362 5.362 7 C 0.380 3.620 8 O -0.426 6.426 9 C -0.263 4.263 10 C -0.068 4.068 11 N -0.094 5.094 12 C -0.088 4.088 13 C -0.091 4.091 14 C -0.149 4.149 15 O -0.368 6.368 16 Si 0.705 3.295 17 C -0.208 4.208 18 C -0.166 4.166 19 C -0.138 4.138 20 C -0.109 4.109 21 H 0.107 0.893 22 C -0.213 4.213 23 C -0.144 4.144 24 C -0.149 4.149 25 H 0.078 0.922 26 H 0.082 0.918 27 H 0.130 0.870 28 H 0.256 0.744 29 H 0.229 0.771 30 H 0.104 0.896 31 H 0.134 0.866 32 H 0.119 0.881 33 H 0.122 0.878 34 H 0.263 0.737 35 H -0.229 1.229 36 H -0.240 1.240 37 H 0.143 0.857 38 H 0.084 0.916 39 H 0.093 0.907 40 H 0.085 0.915 41 H 0.086 0.914 42 H 0.067 0.933 43 H 0.072 0.928 44 H 0.083 0.917 45 H 0.101 0.899 46 H 0.109 0.891 47 H 0.105 0.895 48 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 7.195 -3.475 -6.052 10.024 hybrid contribution -0.524 0.706 0.236 0.910 sum 6.672 -2.769 -5.816 9.274 Atomic orbital electron populations 1.23426 0.76711 1.04594 1.02219 1.86932 1.23339 1.32219 1.82322 1.24883 0.93277 0.81415 0.71207 1.90645 1.67612 1.37174 1.47002 1.20182 0.83196 0.89902 0.95129 1.45668 1.54857 1.03583 1.32088 1.17509 0.78764 0.82165 0.83520 1.90758 1.38602 1.84457 1.28779 1.20240 1.11361 0.92607 1.02110 1.22479 0.98979 0.89739 0.95629 1.43772 1.37988 1.04600 1.23017 1.22742 0.94983 1.05977 0.85089 1.20121 1.02590 0.91420 0.94923 1.24289 1.11880 0.90174 0.88601 1.86246 1.96669 1.32624 1.21249 0.94946 0.73099 0.86338 0.75148 1.21593 1.05030 0.92851 1.01314 1.21931 0.98618 1.03134 0.92905 1.21448 0.92333 0.98284 1.01725 1.21144 1.00981 0.93847 0.94902 0.89316 1.21979 1.00841 0.98442 1.00042 1.21621 0.91911 1.04121 0.96797 1.21821 0.98669 0.92491 1.01921 0.92177 0.91809 0.86976 0.74426 0.77086 0.89591 0.86615 0.88072 0.87833 0.73692 1.22919 1.24045 0.85690 0.91553 0.90706 0.91458 0.91363 0.93257 0.92790 0.91713 0.89897 0.89138 0.89465 0.89952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.23 10.56 113.37 1.20 1.42 16 2 O -0.33 -4.89 6.72 -43.65 -0.29 -5.19 16 3 C 0.45 5.66 6.71 71.24 0.48 6.14 16 4 O -0.53 -8.65 15.84 21.95 0.35 -8.31 16 5 C 0.20 1.05 0.63 2.86 0.00 1.05 16 6 N -0.71 -1.68 4.02 -429.72 -1.73 -3.40 16 7 C 0.59 5.70 6.74 86.62 0.58 6.28 16 8 O -0.55 -9.76 12.21 19.32 0.24 -9.53 16 9 C -0.25 -1.89 6.29 -19.04 -0.12 -2.01 16 10 C 0.07 -0.03 10.83 83.91 0.91 0.87 16 11 N -0.42 -0.08 3.09 -533.22 -1.65 -1.73 16 12 C 0.05 -0.35 10.71 127.77 1.37 1.02 16 13 C 0.02 0.09 6.16 40.98 0.25 0.34 16 14 C -0.04 0.11 2.97 71.24 0.21 0.32 16 15 O -0.56 3.68 9.68 -148.98 -1.44 2.24 16 16 Si 0.80 -0.58 31.24 68.60 2.14 1.57 16 17 C -0.18 -1.88 9.50 23.62 0.22 -1.65 16 18 C -0.13 -0.77 4.23 30.59 0.13 -0.64 16 19 C -0.10 -0.07 5.29 30.59 0.16 0.09 16 20 C -0.09 0.29 3.19 -10.79 -0.03 0.26 16 21 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 22 C -0.16 0.22 8.50 71.98 0.61 0.83 16 23 C -0.11 0.60 5.28 30.61 0.16 0.76 16 24 C -0.11 0.02 4.04 30.61 0.12 0.14 16 25 H 0.06 0.55 8.13 -2.39 -0.02 0.53 16 26 H 0.06 0.50 8.13 -2.39 -0.02 0.48 16 27 H 0.11 0.66 8.14 -2.39 -0.02 0.64 16 28 H 0.42 -2.09 6.26 -92.71 -0.58 -2.67 16 29 H 0.21 -2.15 7.45 -2.91 -0.02 -2.17 16 30 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 31 H 0.12 -0.68 5.13 -2.38 -0.01 -0.69 16 32 H 0.10 -1.09 8.13 -2.39 -0.02 -1.11 16 33 H 0.10 -0.72 7.96 -2.39 -0.02 -0.74 16 34 H 0.41 -6.87 8.74 -74.06 -0.65 -7.52 16 35 H -0.30 -2.18 6.89 99.48 0.68 -1.50 16 36 H -0.31 -2.84 7.11 99.48 0.71 -2.14 16 37 H 0.13 1.71 6.76 -2.91 -0.02 1.70 16 38 H 0.07 0.82 6.16 -2.39 -0.01 0.81 16 39 H 0.07 0.48 6.43 -2.39 -0.02 0.47 16 40 H 0.07 0.06 7.60 -2.39 -0.02 0.04 16 41 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 42 H 0.05 0.06 4.81 -2.39 -0.01 0.05 16 43 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 44 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 45 H 0.08 -0.74 6.86 -2.39 -0.02 -0.76 16 46 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 47 H 0.09 0.22 6.16 -2.39 -0.01 0.20 16 48 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 Total: 0.00 -29.50 368.29 3.67 -25.83 By element: Atomic # 1 Polarization: -16.49 SS G_CDS: -0.21 Total: -16.70 kcal Atomic # 6 Polarization: 8.96 SS G_CDS: 6.26 Total: 15.22 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: -3.37 Total: -5.13 kcal Atomic # 8 Polarization: -19.63 SS G_CDS: -1.15 Total: -20.79 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: 2.14 Total: 1.57 kcal Total: -29.50 3.67 -25.83 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.906 kcal (2) G-P(sol) polarization free energy of solvation -29.497 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.832 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds