Wall clock time and date at job start Sat Mar 6 2021 20:50:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34224 * 116.99980 * 2 1 4 4 O 1.20829 * 119.99975 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00111 * 179.97438 * 3 2 1 6 6 N 1.46492 * 109.47280 * 325.00626 * 5 3 2 7 7 C 1.34777 * 120.00127 * 59.99631 * 6 5 3 8 8 O 1.21583 * 120.00059 * 359.97438 * 7 6 5 9 9 C 1.47606 * 120.00403 * 179.97438 * 7 6 5 10 10 C 1.39713 * 120.08509 * 359.97438 * 9 7 6 11 11 C 1.37727 * 119.91372 * 179.76395 * 10 9 7 12 12 C 1.50692 * 119.95943 * 180.25112 * 11 10 9 13 13 C 1.38977 * 120.08184 * 0.51044 * 11 10 9 14 14 O 1.35709 * 119.90944 * 179.76432 * 13 11 10 15 15 C 1.39022 * 120.17751 * 359.48215 * 13 11 10 16 16 C 1.50699 * 119.95295 * 180.23579 * 15 13 11 17 17 O 1.42908 * 109.47081 * 285.00173 * 16 15 13 18 18 Si 1.86294 * 109.46947 * 165.00313 * 16 15 13 19 19 C 1.37670 * 120.08633 * 0.26323 * 15 13 11 20 20 C 1.52997 * 109.47370 * 205.00214 * 5 3 2 21 21 C 1.53003 * 109.47233 * 180.02562 * 20 5 3 22 22 C 1.53000 * 109.47074 * 60.00135 * 21 20 5 23 23 H 1.09002 * 109.46891 * 180.02562 * 22 21 20 24 24 C 1.52993 * 109.46961 * 60.00076 * 22 21 20 25 25 C 1.53006 * 109.47047 * 300.00135 * 22 21 20 26 26 C 1.52999 * 109.46982 * 59.99881 * 25 22 21 27 27 H 1.08996 * 109.47000 * 60.00025 * 1 2 3 28 28 H 1.08997 * 109.47158 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46997 * 299.99378 * 1 2 3 30 30 H 0.97002 * 120.00273 * 239.99775 * 6 5 3 31 31 H 1.08002 * 120.04803 * 0.02562 * 10 9 7 32 32 H 1.09004 * 109.47453 * 270.25663 * 12 11 10 33 33 H 1.08999 * 109.47233 * 30.25778 * 12 11 10 34 34 H 1.08999 * 109.47446 * 150.25944 * 12 11 10 35 35 H 0.96700 * 114.00111 * 269.72265 * 14 13 11 36 36 H 1.08994 * 109.47412 * 45.00208 * 16 15 13 37 37 H 0.96699 * 114.00059 * 300.00093 * 17 16 15 38 38 H 1.48501 * 110.00063 * 58.67896 * 18 16 15 39 39 H 1.48509 * 110.00092 * 179.97438 * 18 16 15 40 40 H 1.08009 * 120.04374 * 180.02562 * 19 15 13 41 41 H 1.08997 * 109.47227 * 300.00159 * 20 5 3 42 42 H 1.09002 * 109.47047 * 60.00167 * 20 5 3 43 43 H 1.08992 * 109.47285 * 180.02562 * 21 20 5 44 44 H 1.08997 * 109.46807 * 300.00003 * 21 20 5 45 45 H 1.08996 * 109.47638 * 60.00370 * 24 22 21 46 46 H 1.09008 * 109.47052 * 179.97438 * 24 22 21 47 47 H 1.09002 * 109.47393 * 299.99784 * 24 22 21 48 48 H 1.09002 * 109.47113 * 180.02562 * 25 22 21 49 49 H 1.09001 * 109.47097 * 299.99788 * 25 22 21 50 50 H 1.09003 * 109.46541 * 179.97438 * 26 25 22 51 51 H 1.08997 * 109.46866 * 60.00270 * 26 25 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1129 0.1707 0.7931 7 6 3.8538 -1.1043 0.4411 8 8 3.1661 -1.3380 -0.5338 9 6 4.4050 -2.2169 1.2393 10 6 5.1960 -1.9504 2.3597 11 6 5.7045 -2.9912 3.1047 12 6 6.5531 -2.7049 4.3166 13 6 5.4404 -4.3052 2.7371 14 8 5.9472 -5.3281 3.4710 15 6 4.6537 -4.5745 1.6230 16 6 4.3661 -6.0012 1.2320 17 8 5.5288 -6.5736 0.6297 18 14 2.9544 -6.0396 0.0170 19 6 4.1374 -3.5396 0.8762 20 6 4.0070 2.6072 0.6101 21 6 5.5349 2.6875 0.6101 22 6 6.0508 2.5887 -0.8269 23 1 7.1393 2.6455 -0.8268 24 6 5.4795 3.7419 -1.6542 25 6 5.6101 1.2563 -1.4365 26 6 4.0822 1.1761 -1.4364 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5137 0.8901 30 1 4.6613 0.3571 1.5712 31 1 5.4051 -0.9296 2.6437 32 1 7.6001 -2.6405 4.0202 33 1 6.2429 -1.7598 4.7624 34 1 6.4303 -3.5073 5.0441 35 1 6.8164 -5.6314 3.1753 36 1 4.0973 -6.5740 2.1195 37 1 5.8257 -6.1136 -0.1674 38 1 3.2960 -5.2357 -1.1840 39 1 2.6613 -7.4411 -0.3770 40 1 3.5259 -3.7496 0.0110 41 1 3.6003 3.4287 0.0205 42 1 3.6391 2.6777 1.6338 43 1 5.8489 3.6364 1.0448 44 1 5.9419 1.8660 1.1996 45 1 5.7934 4.6911 -1.2200 46 1 5.8474 3.6718 -2.6779 47 1 4.3909 3.6847 -1.6542 48 1 5.9780 1.1858 -2.4601 49 1 6.0172 0.4348 -0.8471 50 1 3.7683 0.2270 -1.8712 51 1 3.6752 1.9976 -2.0259 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_13287732.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:46 Heat of formation + Delta-G solvation = -161.902495 kcal Electronic energy + Delta-G solvation = -35657.579670 eV Core-core repulsion = 31103.018666 eV Total energy + Delta-G solvation = -4554.561004 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.59164 -41.44796 -40.46711 -39.41371 -37.95133 -37.57293 -37.38414 -35.58965 -33.96800 -32.71534 -31.97890 -30.92297 -29.04596 -27.94754 -27.74860 -26.85896 -25.10165 -24.30809 -23.88131 -22.18576 -21.80762 -21.26214 -19.74695 -19.44083 -18.90368 -18.77632 -18.13256 -17.85758 -17.44356 -17.08832 -16.81258 -16.45712 -16.20667 -16.02826 -15.85432 -15.48219 -15.43500 -15.07015 -14.93736 -14.70415 -14.50466 -14.32409 -14.08907 -14.01923 -13.81528 -13.76331 -13.64630 -13.31566 -13.27525 -13.04102 -12.88054 -12.73088 -12.68931 -12.60098 -12.44769 -12.10141 -11.88808 -11.83306 -11.79711 -11.60997 -11.39730 -11.24782 -11.14497 -10.79500 -10.62068 -10.27643 -9.94634 -9.61624 -4.99595 -0.34246 0.11225 0.94003 1.22290 1.52295 1.58248 1.77589 1.86188 1.95066 2.62121 3.16434 3.26708 3.35872 3.50542 3.53411 3.60817 3.65064 3.73969 3.98842 4.00973 4.05952 4.08280 4.21336 4.21791 4.25205 4.25468 4.40432 4.42430 4.46380 4.53046 4.58351 4.64108 4.68236 4.76656 4.80177 4.84718 4.85002 4.88439 5.02813 5.06460 5.09314 5.10555 5.12291 5.18021 5.24688 5.27877 5.32009 5.35426 5.37063 5.39798 5.55099 5.63254 6.41056 6.42004 6.60628 6.73790 7.16148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.332 6.332 3 C 0.450 3.550 4 O -0.535 6.535 5 C 0.204 3.796 6 N -0.704 5.704 7 C 0.561 3.439 8 O -0.529 6.529 9 C -0.143 4.143 10 C -0.056 4.056 11 C -0.118 4.118 12 C -0.113 4.113 13 C 0.155 3.845 14 O -0.497 6.497 15 C -0.152 4.152 16 C -0.061 4.061 17 O -0.540 6.540 18 Si 0.743 3.257 19 C -0.063 4.063 20 C -0.113 4.113 21 C -0.109 4.109 22 C -0.091 4.091 23 H 0.087 0.913 24 C -0.156 4.156 25 C -0.102 4.102 26 C -0.129 4.129 27 H 0.056 0.944 28 H 0.121 0.879 29 H 0.062 0.938 30 H 0.418 0.582 31 H 0.161 0.839 32 H 0.084 0.916 33 H 0.085 0.915 34 H 0.069 0.931 35 H 0.411 0.589 36 H 0.124 0.876 37 H 0.385 0.615 38 H -0.286 1.286 39 H -0.294 1.294 40 H 0.134 0.866 41 H 0.087 0.913 42 H 0.083 0.917 43 H 0.088 0.912 44 H 0.083 0.917 45 H 0.062 0.938 46 H 0.052 0.948 47 H 0.050 0.950 48 H 0.068 0.932 49 H 0.069 0.931 50 H 0.071 0.929 51 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.408 2.361 4.393 7.356 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.246 6.246 3 C 0.293 3.707 4 O -0.424 6.424 5 C 0.115 3.885 6 N -0.361 5.361 7 C 0.349 3.651 8 O -0.405 6.405 9 C -0.146 4.146 10 C -0.075 4.075 11 C -0.119 4.119 12 C -0.169 4.169 13 C 0.110 3.890 14 O -0.311 6.311 15 C -0.153 4.153 16 C -0.171 4.171 17 O -0.348 6.348 18 Si 0.649 3.351 19 C -0.082 4.082 20 C -0.151 4.151 21 C -0.146 4.146 22 C -0.110 4.110 23 H 0.105 0.895 24 C -0.213 4.213 25 C -0.139 4.139 26 C -0.167 4.167 27 H 0.074 0.926 28 H 0.139 0.861 29 H 0.081 0.919 30 H 0.259 0.741 31 H 0.178 0.822 32 H 0.103 0.897 33 H 0.104 0.896 34 H 0.088 0.912 35 H 0.271 0.729 36 H 0.142 0.858 37 H 0.235 0.765 38 H -0.212 1.212 39 H -0.221 1.221 40 H 0.151 0.849 41 H 0.105 0.895 42 H 0.102 0.898 43 H 0.107 0.893 44 H 0.102 0.898 45 H 0.081 0.919 46 H 0.071 0.929 47 H 0.069 0.931 48 H 0.086 0.914 49 H 0.088 0.912 50 H 0.090 0.910 51 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 3.843 1.893 3.713 5.669 hybrid contribution 0.894 -0.017 -0.855 1.237 sum 4.737 1.875 2.858 5.842 Atomic orbital electron populations 1.23471 0.76410 1.05074 1.02034 1.86884 1.23511 1.31881 1.82314 1.24748 0.93031 0.81596 0.71327 1.90663 1.67545 1.37320 1.46870 1.20191 0.83483 0.89723 0.95070 1.45787 1.54430 1.03815 1.32054 1.18288 0.79636 0.82935 0.84259 1.90803 1.37443 1.84308 1.27987 1.19739 1.03426 0.92837 0.98602 1.21362 0.93751 1.00359 0.92001 1.20418 1.00545 0.91687 0.99245 1.20766 0.98884 1.03528 0.93713 1.18449 0.94337 0.87290 0.88964 1.84630 1.40287 1.50272 1.55893 1.20470 1.02228 0.96020 0.96553 1.24826 0.95761 0.91548 1.05015 1.86580 1.44523 1.57877 1.45779 0.93956 0.84161 0.77888 0.79094 1.21085 0.97077 0.91340 0.98660 1.21822 0.98543 0.92660 1.02064 1.21618 0.92071 1.04131 0.96765 1.21148 1.00938 0.93985 0.94909 0.89472 1.21980 1.00897 0.98452 1.00013 1.21467 0.92491 0.98205 1.01772 1.21947 0.98463 1.03467 0.92819 0.92555 0.86114 0.91944 0.74150 0.82162 0.89742 0.89627 0.91228 0.72878 0.85784 0.76547 1.21239 1.22109 0.84897 0.89496 0.89812 0.89325 0.89820 0.91907 0.92866 0.93121 0.91354 0.91201 0.91003 0.90702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.10 10.56 113.37 1.20 1.30 16 2 O -0.33 -2.91 6.72 -43.61 -0.29 -3.20 16 3 C 0.45 3.64 6.71 71.24 0.48 4.12 16 4 O -0.53 -6.74 15.84 21.95 0.35 -6.39 16 5 C 0.20 0.20 0.63 2.86 0.00 0.21 16 6 N -0.70 1.79 3.98 -429.41 -1.71 0.08 16 7 C 0.56 1.46 6.70 86.72 0.58 2.04 16 8 O -0.53 -5.10 11.58 19.46 0.23 -4.88 16 9 C -0.14 0.01 5.87 -20.08 -0.12 -0.11 16 10 C -0.06 0.29 9.18 22.51 0.21 0.50 16 11 C -0.12 0.46 5.89 -19.81 -0.12 0.34 16 12 C -0.11 0.85 9.78 71.23 0.70 1.55 16 13 C 0.16 -0.14 6.66 22.64 0.15 0.01 16 14 O -0.50 0.77 11.84 -90.29 -1.07 -0.30 16 15 C -0.15 -0.05 5.27 -19.81 -0.10 -0.15 16 16 C -0.06 -0.03 2.37 71.24 0.17 0.14 16 17 O -0.54 -0.72 12.88 -148.98 -1.92 -2.64 16 18 Si 0.74 1.16 30.24 68.60 2.07 3.23 16 19 C -0.06 -0.11 8.20 22.50 0.18 0.07 16 20 C -0.11 0.35 4.04 30.59 0.12 0.48 16 21 C -0.11 0.86 5.28 30.60 0.16 1.02 16 22 C -0.09 0.51 3.19 -10.79 -0.03 0.47 16 23 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 24 C -0.16 0.52 8.50 71.98 0.61 1.14 16 25 C -0.10 0.27 5.29 30.60 0.16 0.43 16 26 C -0.13 -0.26 4.23 30.59 0.13 -0.13 16 27 H 0.06 0.28 8.13 -2.39 -0.02 0.26 16 28 H 0.12 -0.04 8.14 -2.39 -0.02 -0.06 16 29 H 0.06 0.21 8.13 -2.39 -0.02 0.19 16 30 H 0.42 -3.80 5.34 -92.71 -0.50 -4.29 16 31 H 0.16 -1.93 6.39 -2.91 -0.02 -1.95 16 32 H 0.08 -0.81 8.14 -2.38 -0.02 -0.83 16 33 H 0.08 -0.87 8.08 -2.39 -0.02 -0.89 16 34 H 0.07 -0.36 7.52 -2.39 -0.02 -0.38 16 35 H 0.41 -3.27 9.06 -74.06 -0.67 -3.95 16 36 H 0.12 0.05 7.82 -2.39 -0.02 0.03 16 37 H 0.39 -1.49 8.70 -74.06 -0.64 -2.14 16 38 H -0.29 -1.86 6.68 99.48 0.66 -1.20 16 39 H -0.29 -2.37 7.11 99.48 0.71 -1.66 16 40 H 0.13 0.52 4.43 -2.91 -0.01 0.51 16 41 H 0.09 -0.01 6.16 -2.39 -0.01 -0.02 16 42 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 43 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 44 H 0.08 -0.96 6.86 -2.39 -0.02 -0.98 16 45 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 46 H 0.05 -0.14 8.14 -2.38 -0.02 -0.16 16 47 H 0.05 -0.05 4.81 -2.39 -0.01 -0.06 16 48 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 49 H 0.07 -0.23 7.61 -2.39 -0.02 -0.24 16 50 H 0.07 0.51 6.17 -2.39 -0.01 0.50 16 51 H 0.07 0.23 6.43 -2.39 -0.02 0.21 16 Total: 0.00 -21.41 392.02 1.32 -20.08 By element: Atomic # 1 Polarization: -18.58 SS G_CDS: -0.81 Total: -19.39 kcal Atomic # 6 Polarization: 8.93 SS G_CDS: 4.48 Total: 13.41 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -1.71 Total: 0.08 kcal Atomic # 8 Polarization: -14.70 SS G_CDS: -2.71 Total: -17.41 kcal Atomic # 14 Polarization: 1.16 SS G_CDS: 2.07 Total: 3.23 kcal Total: -21.41 1.32 -20.08 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13287732.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.820 kcal (2) G-P(sol) polarization free energy of solvation -21.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds