Wall clock time and date at job start Sat Mar 6 2021 20:50:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34229 * 117.00085 * 2 1 4 4 O 1.20827 * 119.99937 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00155 * 179.97438 * 3 2 1 6 6 N 1.46500 * 109.46995 * 35.00118 * 5 3 2 7 7 C 1.34767 * 120.00203 * 300.00051 * 6 5 3 8 8 O 1.21548 * 120.00395 * 0.02562 * 7 6 5 9 9 C 1.47848 * 120.00062 * 179.97438 * 7 6 5 10 10 C 1.39519 * 120.55453 * 359.72948 * 9 7 6 11 11 N 1.31705 * 120.56078 * 179.67569 * 10 9 7 12 12 C 1.31923 * 121.87625 * 0.63177 * 11 10 9 13 13 C 1.38347 * 121.08312 * 359.65365 * 12 11 10 14 14 C 1.50707 * 120.34671 * 180.02562 * 13 12 11 15 15 O 1.42896 * 109.46971 * 119.98040 * 14 13 12 16 16 Si 1.86298 * 109.47221 * 359.97438 * 14 13 12 17 17 C 1.38351 * 119.30593 * 0.02562 * 13 12 11 18 18 C 1.53002 * 109.47303 * 275.00125 * 5 3 2 19 19 C 1.52996 * 109.46972 * 179.97438 * 18 5 3 20 20 C 1.52997 * 109.47131 * 60.00459 * 19 18 5 21 21 H 1.09002 * 109.47153 * 179.97438 * 20 19 18 22 22 C 1.52997 * 109.47232 * 59.99874 * 20 19 18 23 23 C 1.52999 * 109.46991 * 299.99311 * 20 19 18 24 24 C 1.52997 * 109.47055 * 155.00429 * 5 3 2 25 25 H 1.09001 * 109.46782 * 59.99982 * 1 2 3 26 26 H 1.08999 * 109.46587 * 179.97438 * 1 2 3 27 27 H 1.08992 * 109.47205 * 299.99828 * 1 2 3 28 28 H 0.97004 * 119.99396 * 119.99825 * 6 5 3 29 29 H 1.07997 * 119.72176 * 359.97438 * 10 9 7 30 30 H 1.08004 * 119.45695 * 179.67622 * 12 11 10 31 31 H 1.09004 * 109.46522 * 239.97622 * 14 13 12 32 32 H 0.96702 * 114.00154 * 299.99285 * 15 14 13 33 33 H 1.48497 * 110.00004 * 58.68280 * 16 14 13 34 34 H 1.48500 * 109.99853 * 180.02562 * 16 14 13 35 35 H 1.08002 * 120.85885 * 180.02562 * 17 13 12 36 36 H 1.08996 * 109.47407 * 300.00377 * 18 5 3 37 37 H 1.09000 * 109.46986 * 60.00149 * 18 5 3 38 38 H 1.09001 * 109.46993 * 180.02562 * 19 18 5 39 39 H 1.09000 * 109.47380 * 299.99696 * 19 18 5 40 40 H 1.09002 * 109.47045 * 300.00058 * 22 20 19 41 41 H 1.09001 * 109.47375 * 60.00133 * 22 20 19 42 42 H 1.09000 * 109.47140 * 180.02562 * 22 20 19 43 43 H 1.08993 * 109.47839 * 300.00447 * 23 20 19 44 44 H 1.09000 * 109.47160 * 180.02562 * 23 20 19 45 45 H 1.09001 * 109.47502 * 60.00512 * 24 5 3 46 46 H 1.09001 * 109.47289 * 300.00308 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1135 0.1704 -0.7912 7 6 3.8542 -1.1044 -0.4391 8 8 3.1659 -1.3378 0.5351 9 6 4.4059 -2.2190 -1.2386 10 6 5.1918 -1.9643 -2.3629 11 7 5.6887 -2.9571 -3.0715 12 6 5.4581 -4.2183 -2.7609 13 6 4.6840 -4.5539 -1.6645 14 6 4.4317 -6.0003 -1.3245 15 8 4.9360 -6.2771 -0.0165 16 14 5.2938 -7.0895 -2.5660 17 6 4.1439 -3.5478 -0.8834 18 6 4.0817 1.1763 1.4378 19 6 5.6096 1.2557 1.4383 20 6 6.0512 2.5876 0.8284 21 1 7.1397 2.6444 0.8292 22 6 5.4803 3.7414 1.6553 23 6 5.5359 2.6862 -0.6088 24 6 4.0074 2.6070 -0.6090 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8899 28 1 4.6625 0.3567 -1.5690 29 1 5.3985 -0.9444 -2.6519 30 1 5.8809 -5.0018 -3.3724 31 1 3.3600 -6.1979 -1.3501 32 1 5.8858 -6.1230 0.0797 33 1 6.7516 -6.8072 -2.5635 34 1 5.0522 -8.5185 -2.2421 35 1 3.5362 -3.7813 -0.0216 36 1 3.6746 1.9979 2.0270 37 1 3.7675 0.2272 1.8722 38 1 5.9768 1.1850 2.4621 39 1 6.0164 0.4337 0.8493 40 1 4.3917 3.6848 1.6550 41 1 5.8474 3.6711 2.6792 42 1 5.7945 4.6903 1.2206 43 1 5.9426 1.8643 -1.1979 44 1 5.8509 3.6349 -1.0434 45 1 3.6004 3.4288 -0.0198 46 1 3.6403 2.6774 -1.6329 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13287814.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:56 Heat of formation + Delta-G solvation = -105.404414 kcal Electronic energy + Delta-G solvation = -30899.512664 eV Core-core repulsion = 26756.195501 eV Total energy + Delta-G solvation = -4143.317164 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.58381 -41.61517 -40.33457 -39.33252 -38.11050 -37.28046 -35.62712 -33.78464 -33.53611 -32.08117 -31.49891 -28.99781 -27.82276 -27.35662 -25.91008 -24.36853 -24.02516 -23.86511 -22.08847 -21.28568 -19.75505 -19.34584 -18.75917 -18.18350 -18.04332 -17.70177 -17.59568 -17.21769 -16.78192 -16.52737 -16.15656 -15.98444 -15.57895 -15.41824 -15.15805 -14.83779 -14.56233 -14.42754 -14.38022 -14.24364 -14.09796 -13.77353 -13.64161 -13.48845 -13.34994 -12.98145 -12.83547 -12.76320 -12.66517 -12.23572 -12.11903 -11.80985 -11.61734 -11.51750 -11.39787 -11.25878 -11.08487 -11.03650 -10.73754 -10.50399 -10.38510 -10.23028 -5.10081 -0.58819 -0.04216 1.08229 1.13156 1.45686 1.64667 1.82584 1.85340 1.91684 2.62895 2.96508 3.19131 3.24596 3.36041 3.48481 3.57842 3.58983 3.65762 3.72305 3.87016 3.92060 4.01378 4.07862 4.12918 4.18953 4.27283 4.30541 4.35410 4.36198 4.43070 4.48821 4.67116 4.67814 4.72605 4.77913 4.81750 4.87075 4.89083 4.96287 5.00569 5.02777 5.15798 5.21725 5.26098 5.29693 5.40906 5.50514 6.23380 6.25099 6.60176 6.79757 7.07559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.323 6.323 3 C 0.456 3.544 4 O -0.505 6.505 5 C 0.200 3.800 6 N -0.718 5.718 7 C 0.564 3.436 8 O -0.489 6.489 9 C -0.183 4.183 10 C 0.137 3.863 11 N -0.477 5.477 12 C 0.127 3.873 13 C -0.178 4.178 14 C -0.071 4.071 15 O -0.525 6.525 16 Si 0.684 3.316 17 C 0.012 3.988 18 C -0.132 4.132 19 C -0.107 4.107 20 C -0.095 4.095 21 H 0.076 0.924 22 C -0.155 4.155 23 C -0.114 4.114 24 C -0.117 4.117 25 H 0.059 0.941 26 H 0.100 0.900 27 H 0.062 0.938 28 H 0.404 0.596 29 H 0.159 0.841 30 H 0.163 0.837 31 H 0.125 0.875 32 H 0.377 0.623 33 H -0.255 1.255 34 H -0.251 1.251 35 H 0.153 0.847 36 H 0.082 0.918 37 H 0.095 0.905 38 H 0.071 0.929 39 H 0.065 0.935 40 H 0.060 0.940 41 H 0.056 0.944 42 H 0.057 0.943 43 H 0.064 0.936 44 H 0.077 0.923 45 H 0.100 0.900 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.552 0.006 -3.328 4.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.237 6.237 3 C 0.297 3.703 4 O -0.393 6.393 5 C 0.113 3.887 6 N -0.374 5.374 7 C 0.350 3.650 8 O -0.363 6.363 9 C -0.189 4.189 10 C -0.021 4.021 11 N -0.184 5.184 12 C -0.029 4.029 13 C -0.180 4.180 14 C -0.181 4.181 15 O -0.331 6.331 16 Si 0.584 3.416 17 C -0.014 4.014 18 C -0.170 4.170 19 C -0.145 4.145 20 C -0.114 4.114 21 H 0.094 0.906 22 C -0.212 4.212 23 C -0.151 4.151 24 C -0.155 4.155 25 H 0.078 0.922 26 H 0.119 0.881 27 H 0.081 0.919 28 H 0.241 0.759 29 H 0.177 0.823 30 H 0.179 0.821 31 H 0.142 0.858 32 H 0.225 0.775 33 H -0.179 1.179 34 H -0.175 1.175 35 H 0.171 0.829 36 H 0.101 0.899 37 H 0.113 0.887 38 H 0.090 0.910 39 H 0.083 0.917 40 H 0.079 0.921 41 H 0.075 0.925 42 H 0.076 0.924 43 H 0.083 0.917 44 H 0.096 0.904 45 H 0.118 0.882 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.292 -0.466 -3.354 4.088 hybrid contribution 0.055 0.314 1.262 1.302 sum 2.347 -0.151 -2.091 3.147 Atomic orbital electron populations 1.23302 0.77112 1.03745 1.02228 1.86859 1.22570 1.31673 1.82604 1.24054 0.91765 0.82085 0.72349 1.90692 1.66626 1.36576 1.45365 1.20190 0.85313 0.88434 0.94811 1.45939 1.54788 1.04698 1.31975 1.17942 0.80227 0.82131 0.84654 1.90820 1.35502 1.83677 1.26285 1.21007 1.03758 0.94812 0.99283 1.23026 0.90753 0.98876 0.89467 1.67733 1.20998 0.99850 1.29861 1.22887 0.92767 0.93870 0.93349 1.21365 1.00980 0.97685 0.97956 1.24984 1.06113 0.94699 0.92288 1.86645 1.28579 1.89414 1.28498 0.95083 0.80906 0.79521 0.86079 1.21614 0.92782 0.89931 0.97062 1.22024 0.97140 1.05101 0.92780 1.21494 0.94025 0.97295 1.01654 1.21158 1.00441 0.95185 0.94591 0.90555 1.21977 1.01535 0.97793 0.99931 1.21611 0.93663 1.02747 0.97082 1.21838 0.97191 0.94250 1.02220 0.92197 0.88125 0.91940 0.75862 0.82348 0.82060 0.85762 0.77505 1.17949 1.17519 0.82949 0.89920 0.88691 0.91032 0.91664 0.92064 0.92472 0.92413 0.91724 0.90437 0.88186 0.90429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.11 16 2 O -0.32 -1.17 6.72 -47.37 -0.32 -1.49 16 3 C 0.46 1.51 6.71 36.00 0.24 1.75 16 4 O -0.51 -2.75 15.84 -18.75 -0.30 -3.04 16 5 C 0.20 0.03 0.63 -132.97 -0.08 -0.05 16 6 N -0.72 0.88 3.98 -49.62 -0.20 0.68 16 7 C 0.56 0.49 6.71 -12.33 -0.08 0.41 16 8 O -0.49 -1.88 11.66 -19.19 -0.22 -2.10 16 9 C -0.18 0.02 5.89 -104.82 -0.62 -0.60 16 10 C 0.14 -0.16 10.71 -17.13 -0.18 -0.34 16 11 N -0.48 -0.07 10.35 -12.91 -0.13 -0.20 16 12 C 0.13 -0.13 9.84 -17.47 -0.17 -0.30 16 13 C -0.18 0.18 5.39 -104.54 -0.56 -0.39 16 14 C -0.07 0.11 2.83 36.01 0.10 0.21 16 15 O -0.53 -0.03 12.78 -35.23 -0.45 -0.48 16 16 Si 0.68 -1.66 29.82 -169.99 -5.07 -6.73 16 17 C 0.01 0.00 9.31 -38.87 -0.36 -0.36 16 18 C -0.13 -0.04 4.23 -26.73 -0.11 -0.16 16 19 C -0.11 0.14 5.29 -26.73 -0.14 -0.01 16 20 C -0.10 0.21 3.19 -90.62 -0.29 -0.08 16 21 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 22 C -0.16 0.25 8.50 37.16 0.32 0.57 16 23 C -0.11 0.34 5.28 -26.70 -0.14 0.20 16 24 C -0.12 0.16 4.04 -26.70 -0.11 0.05 16 25 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 26 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 28 H 0.40 -1.55 5.38 -40.82 -0.22 -1.77 16 29 H 0.16 -0.66 6.42 -52.49 -0.34 -1.00 16 30 H 0.16 -0.49 4.88 -52.48 -0.26 -0.75 16 31 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 32 H 0.38 -1.04 8.70 45.56 0.40 -0.65 16 33 H -0.25 0.16 7.11 56.52 0.40 0.56 16 34 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 35 H 0.15 0.14 7.74 -52.49 -0.41 -0.27 16 36 H 0.08 0.04 6.43 -51.93 -0.33 -0.29 16 37 H 0.09 0.23 6.17 -51.93 -0.32 -0.09 16 38 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.06 -0.08 7.60 -51.93 -0.39 -0.47 16 40 H 0.06 -0.06 4.81 -51.93 -0.25 -0.31 16 41 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.06 -0.27 6.86 -51.93 -0.36 -0.63 16 44 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 45 H 0.10 -0.04 6.16 -51.93 -0.32 -0.36 16 46 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 LS Contribution 356.86 15.07 5.38 5.38 Total: 0.00 -8.39 356.86 -8.66 -17.04 By element: Atomic # 1 Polarization: -4.87 SS G_CDS: -6.21 Total: -11.08 kcal Atomic # 6 Polarization: 3.16 SS G_CDS: -1.13 Total: 2.03 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.33 Total: 0.48 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.29 Total: -7.12 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.07 Total: -6.73 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -8.39 -8.66 -17.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13287814.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.364 kcal (2) G-P(sol) polarization free energy of solvation -8.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.656 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.041 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds