Wall clock time and date at job start Sat Mar 6 2021 20:51:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34226 * 117.00301 * 2 1 4 4 O 1.20822 * 120.00033 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00138 * 179.97438 * 3 2 1 6 6 N 1.46504 * 109.47294 * 324.99904 * 5 3 2 7 7 C 1.34777 * 119.99854 * 59.99616 * 6 5 3 8 8 O 1.21593 * 119.99953 * 0.02562 * 7 6 5 9 9 C 1.47537 * 120.00133 * 180.27865 * 7 6 5 10 10 C 1.40135 * 120.19429 * 179.45067 * 9 7 6 11 11 O 1.35650 * 120.14877 * 359.97438 * 10 9 7 12 12 C 1.38710 * 119.70308 * 179.72357 * 10 9 7 13 13 C 1.38055 * 120.07969 * 0.57437 * 12 10 9 14 14 C 1.50698 * 119.80695 * 179.71845 * 13 12 10 15 15 O 1.42898 * 109.47035 * 299.98216 * 14 13 12 16 16 Si 1.86301 * 109.47527 * 179.97438 * 14 13 12 17 17 C 1.38556 * 120.39276 * 359.69944 * 13 12 10 18 18 C 1.37787 * 120.29809 * 359.97438 * 17 13 12 19 19 C 1.53004 * 109.47362 * 204.99889 * 5 3 2 20 20 C 1.52994 * 109.47172 * 179.97438 * 19 5 3 21 21 C 1.53001 * 109.47173 * 60.00252 * 20 19 5 22 22 H 1.08997 * 109.47361 * 179.97438 * 21 20 19 23 23 C 1.53000 * 109.46975 * 59.99525 * 21 20 19 24 24 C 1.53004 * 109.46866 * 299.99936 * 21 20 19 25 25 C 1.52994 * 109.47172 * 60.00063 * 24 21 20 26 26 H 1.09001 * 109.47647 * 300.00279 * 1 2 3 27 27 H 1.09003 * 109.47349 * 60.00250 * 1 2 3 28 28 H 1.09002 * 109.47451 * 180.02562 * 1 2 3 29 29 H 0.97000 * 120.00410 * 240.00342 * 6 5 3 30 30 H 0.96699 * 114.00678 * 89.99941 * 11 10 9 31 31 H 1.07989 * 119.96171 * 180.31313 * 12 10 9 32 32 H 1.09005 * 109.47115 * 59.97733 * 14 13 12 33 33 H 0.96710 * 113.99872 * 299.99284 * 15 14 13 34 34 H 1.48498 * 110.00001 * 180.02562 * 16 14 13 35 35 H 1.48503 * 109.99452 * 301.31782 * 16 14 13 36 36 H 1.07995 * 119.84949 * 180.02562 * 17 13 12 37 37 H 1.08001 * 120.04550 * 180.02562 * 18 17 13 38 38 H 1.08998 * 109.46959 * 300.00360 * 19 5 3 39 39 H 1.09007 * 109.46621 * 60.00012 * 19 5 3 40 40 H 1.09001 * 109.47144 * 179.97438 * 20 19 5 41 41 H 1.08998 * 109.47717 * 300.00195 * 20 19 5 42 42 H 1.09001 * 109.47216 * 60.00590 * 23 21 20 43 43 H 1.09006 * 109.46826 * 180.02562 * 23 21 20 44 44 H 1.08997 * 109.47123 * 300.00203 * 23 21 20 45 45 H 1.09007 * 109.46621 * 179.97438 * 24 21 20 46 46 H 1.08998 * 109.46959 * 299.99404 * 24 21 20 47 47 H 1.09001 * 109.47144 * 180.02562 * 25 24 21 48 48 H 1.08998 * 109.47717 * 59.99805 * 25 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1129 0.1706 0.7933 7 6 3.8537 -1.1044 0.4415 8 8 3.1666 -1.3382 -0.5341 9 6 4.3990 -2.2163 1.2433 10 6 4.1225 -3.5434 0.8878 11 8 3.3515 -3.8120 -0.1954 12 6 4.6452 -4.5810 1.6455 13 6 5.4243 -4.3059 2.7515 14 6 5.9838 -5.4379 3.5740 15 8 4.9103 -6.2259 4.0925 16 14 6.9838 -4.7454 4.9851 17 6 5.6952 -2.9951 3.1097 18 6 5.1897 -1.9523 2.3644 19 6 4.0070 2.6071 0.6101 20 6 5.5349 2.6869 0.6113 21 6 6.0519 2.5874 -0.8253 22 1 7.1403 2.6447 -0.8246 23 6 5.4815 3.7406 -1.6535 24 6 5.6111 1.2550 -1.4348 25 6 4.0833 1.1753 -1.4360 26 1 -0.3634 0.5139 0.8899 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 0.0005 29 1 4.6612 0.3571 1.5714 30 1 3.8490 -3.9036 -1.0195 31 1 4.4390 -5.6053 1.3724 32 1 6.6223 -6.0611 2.9478 33 1 4.3006 -5.7349 4.6603 34 1 7.5415 -5.8518 5.8035 35 1 8.0844 -3.8981 4.4596 36 1 6.3061 -2.7900 3.9763 37 1 5.4038 -0.9321 2.6470 38 1 3.6004 3.4286 0.0203 39 1 3.6391 2.6777 1.6337 40 1 5.8489 3.6363 1.0451 41 1 5.9412 1.8654 1.2012 42 1 5.7955 4.6898 -1.2193 43 1 5.8495 3.6695 -2.6771 44 1 4.3931 3.6837 -1.6543 45 1 5.9791 1.1844 -2.4585 46 1 6.0175 0.4335 -0.8449 47 1 3.7693 0.2259 -1.8698 48 1 3.6769 1.9968 -2.0260 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:08 Heat of formation + Delta-G solvation = -156.270343 kcal Electronic energy + Delta-G solvation = -33367.157769 eV Core-core repulsion = 28968.378612 eV Total energy + Delta-G solvation = -4398.779157 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.48044 -41.28041 -40.18214 -39.20155 -38.33675 -37.21528 -37.15451 -35.42467 -33.27432 -32.05794 -31.36395 -31.12867 -28.94535 -27.82467 -27.40102 -24.54022 -24.02765 -23.92694 -23.54795 -21.96541 -21.20840 -19.80337 -19.27856 -18.80655 -18.62604 -18.21817 -17.70447 -17.24664 -16.99570 -16.66355 -16.45166 -16.29476 -16.17356 -15.81701 -15.52780 -15.26916 -15.03110 -14.92034 -14.79960 -14.43315 -14.35520 -14.07446 -13.83364 -13.72357 -13.60753 -13.36228 -13.26943 -12.93343 -12.88820 -12.72530 -12.62618 -12.32673 -12.20891 -12.15742 -11.77219 -11.63119 -11.53087 -11.46567 -11.34109 -11.12365 -10.70459 -10.49118 -10.16940 -10.07870 -9.79774 -5.15048 -0.40756 0.08460 1.14774 1.19154 1.50507 1.72936 1.86296 1.90376 2.01943 2.60404 3.09089 3.25418 3.32891 3.44332 3.52178 3.58711 3.65220 3.71568 3.89376 3.91356 3.99915 4.05989 4.16670 4.18875 4.31486 4.32823 4.34577 4.38802 4.42163 4.50871 4.53955 4.65978 4.69174 4.72587 4.78911 4.79673 4.89229 4.94124 4.98100 5.03502 5.07091 5.09765 5.17655 5.17974 5.25665 5.32719 5.42903 5.51009 5.57878 6.39390 6.44141 6.70181 6.87398 7.25336 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.319 6.319 3 C 0.456 3.544 4 O -0.508 6.508 5 C 0.201 3.799 6 N -0.721 5.721 7 C 0.558 3.442 8 O -0.479 6.479 9 C -0.160 4.160 10 C 0.174 3.826 11 O -0.474 6.474 12 C -0.129 4.129 13 C -0.077 4.077 14 C -0.074 4.074 15 O -0.537 6.537 16 Si 0.692 3.308 17 C -0.136 4.136 18 C -0.067 4.067 19 C -0.117 4.117 20 C -0.113 4.113 21 C -0.095 4.095 22 H 0.075 0.925 23 C -0.155 4.155 24 C -0.107 4.107 25 C -0.132 4.132 26 H 0.058 0.942 27 H 0.061 0.939 28 H 0.101 0.899 29 H 0.402 0.598 30 H 0.397 0.603 31 H 0.140 0.860 32 H 0.118 0.882 33 H 0.381 0.619 34 H -0.253 1.253 35 H -0.256 1.256 36 H 0.135 0.865 37 H 0.132 0.868 38 H 0.099 0.901 39 H 0.076 0.924 40 H 0.076 0.924 41 H 0.064 0.936 42 H 0.056 0.944 43 H 0.056 0.944 44 H 0.061 0.939 45 H 0.070 0.930 46 H 0.065 0.935 47 H 0.095 0.905 48 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.112 1.409 3.119 5.350 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.233 6.233 3 C 0.297 3.703 4 O -0.396 6.396 5 C 0.113 3.887 6 N -0.378 5.378 7 C 0.345 3.655 8 O -0.352 6.352 9 C -0.163 4.163 10 C 0.128 3.872 11 O -0.285 6.285 12 C -0.148 4.148 13 C -0.078 4.078 14 C -0.185 4.185 15 O -0.342 6.342 16 Si 0.594 3.406 17 C -0.154 4.154 18 C -0.086 4.086 19 C -0.155 4.155 20 C -0.150 4.150 21 C -0.114 4.114 22 H 0.094 0.906 23 C -0.212 4.212 24 C -0.144 4.144 25 C -0.170 4.170 26 H 0.077 0.923 27 H 0.080 0.920 28 H 0.119 0.881 29 H 0.239 0.761 30 H 0.255 0.745 31 H 0.158 0.842 32 H 0.135 0.865 33 H 0.228 0.772 34 H -0.178 1.178 35 H -0.181 1.181 36 H 0.152 0.848 37 H 0.150 0.850 38 H 0.117 0.883 39 H 0.095 0.905 40 H 0.095 0.905 41 H 0.082 0.918 42 H 0.076 0.924 43 H 0.075 0.925 44 H 0.080 0.920 45 H 0.089 0.911 46 H 0.084 0.916 47 H 0.113 0.887 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 3.976 1.110 2.814 4.996 hybrid contribution 0.263 -0.042 -0.521 0.584 sum 4.238 1.068 2.294 4.936 Atomic orbital electron populations 1.23288 0.77216 1.03755 1.02049 1.86888 1.22470 1.31478 1.82447 1.24094 0.91832 0.82108 0.72296 1.90683 1.66698 1.36644 1.45563 1.20141 0.85329 0.88501 0.94746 1.45971 1.55102 1.04756 1.31981 1.17975 0.80457 0.82056 0.85011 1.90834 1.34724 1.83533 1.26106 1.20396 1.03102 0.93623 0.99213 1.18480 0.89086 0.89920 0.89759 1.84775 1.34031 1.92610 1.17105 1.21345 0.97754 0.99888 0.95803 1.20444 0.97017 0.94736 0.95594 1.25173 0.95385 0.94611 1.03291 1.86533 1.40537 1.38270 1.68887 0.94647 0.82030 0.82395 0.81566 1.20940 1.01869 0.91892 1.00668 1.21140 0.94842 0.99473 0.93119 1.21814 0.97103 0.94392 1.02162 1.21594 0.93756 1.02620 0.97070 1.21156 1.00355 0.95224 0.94615 0.90635 1.21978 1.01574 0.97788 0.99902 1.21489 0.94126 0.97259 1.01533 1.22013 0.97019 1.05022 0.92926 0.92315 0.92046 0.88100 0.76051 0.74491 0.84234 0.86485 0.77152 1.17784 1.18060 0.84778 0.85003 0.88302 0.90542 0.90546 0.91765 0.92448 0.92496 0.92043 0.91131 0.91647 0.88690 0.90081 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.08 10.56 101.05 1.07 1.14 16 2 O -0.32 -1.43 6.72 -47.36 -0.32 -1.75 16 3 C 0.46 1.75 6.71 36.01 0.24 2.00 16 4 O -0.51 -3.02 15.84 -18.75 -0.30 -3.32 16 5 C 0.20 0.10 0.63 -132.97 -0.08 0.02 16 6 N -0.72 0.62 3.98 -49.71 -0.20 0.42 16 7 C 0.56 0.76 6.70 -12.47 -0.08 0.67 16 8 O -0.48 -2.00 10.40 -26.62 -0.28 -2.28 16 9 C -0.16 -0.04 5.89 -104.84 -0.62 -0.65 16 10 C 0.17 0.18 6.72 -38.70 -0.26 -0.08 16 11 O -0.47 -0.88 11.58 -40.53 -0.47 -1.35 16 12 C -0.13 0.00 9.53 -39.47 -0.38 -0.38 16 13 C -0.08 0.10 5.39 -104.57 -0.56 -0.47 16 14 C -0.07 0.12 2.81 36.00 0.10 0.22 16 15 O -0.54 0.38 12.76 -35.23 -0.45 -0.07 16 16 Si 0.69 -1.75 29.77 -169.99 -5.06 -6.81 16 17 C -0.14 0.33 8.65 -39.63 -0.34 -0.01 16 18 C -0.07 0.15 9.54 -39.20 -0.37 -0.22 16 19 C -0.12 0.13 4.04 -26.73 -0.11 0.02 16 20 C -0.11 0.33 5.28 -26.73 -0.14 0.19 16 21 C -0.10 0.21 3.20 -90.62 -0.29 -0.08 16 22 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 23 C -0.16 0.24 8.50 37.16 0.32 0.56 16 24 C -0.11 0.14 5.29 -26.73 -0.14 0.00 16 25 C -0.13 -0.06 4.23 -26.73 -0.11 -0.17 16 26 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 27 H 0.06 0.14 8.13 -51.93 -0.42 -0.28 16 28 H 0.10 0.09 8.14 -51.93 -0.42 -0.33 16 29 H 0.40 -1.40 5.35 -40.82 -0.22 -1.62 16 30 H 0.40 -0.68 9.06 45.56 0.41 -0.26 16 31 H 0.14 0.00 8.06 -52.49 -0.42 -0.42 16 32 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 33 H 0.38 -1.70 8.70 45.56 0.40 -1.30 16 34 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 35 H -0.26 0.15 7.11 56.52 0.40 0.55 16 36 H 0.13 -0.60 4.85 -52.49 -0.25 -0.86 16 37 H 0.13 -0.68 6.40 -52.49 -0.34 -1.01 16 38 H 0.10 -0.01 6.16 -51.93 -0.32 -0.33 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 41 H 0.06 -0.26 6.86 -51.93 -0.36 -0.62 16 42 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.06 -0.05 4.81 -51.93 -0.25 -0.30 16 45 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.06 -0.08 7.60 -51.93 -0.39 -0.48 16 47 H 0.09 0.23 6.16 -51.93 -0.32 -0.09 16 48 H 0.08 0.06 6.43 -51.93 -0.33 -0.28 16 LS Contribution 370.58 15.07 5.58 5.58 Total: 0.00 -9.45 370.58 -9.07 -18.51 By element: Atomic # 1 Polarization: -5.88 SS G_CDS: -5.81 Total: -11.69 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: -1.77 Total: 2.74 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -0.20 Total: 0.42 kcal Atomic # 8 Polarization: -6.94 SS G_CDS: -1.81 Total: -8.76 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.06 Total: -6.81 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -9.45 -9.07 -18.51 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.757 kcal (2) G-P(sol) polarization free energy of solvation -9.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.065 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.513 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.270 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds