Wall clock time and date at job start Sat Mar 6 2021 20:51:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34223 * 117.00502 * 2 1 4 4 O 1.20832 * 119.99619 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00056 * 179.97438 * 3 2 1 6 6 N 1.46492 * 109.47354 * 325.00478 * 5 3 2 7 7 C 1.34779 * 120.00559 * 59.99670 * 6 5 3 8 8 O 1.21657 * 119.99094 * 359.97438 * 7 6 5 9 9 C 1.47034 * 120.00578 * 179.97438 * 7 6 5 10 10 C 1.36224 * 123.49342 * 179.70519 * 9 7 6 11 11 Cl 1.73598 * 124.60484 * 0.02562 * 10 9 7 12 12 S 1.70448 * 110.78930 * 179.89583 * 10 9 7 13 13 C 1.75493 * 92.46491 * 0.31712 * 12 10 9 14 14 C 1.50708 * 124.68462 * 179.85707 * 13 12 10 15 15 O 1.42907 * 109.46939 * 244.95846 * 14 13 12 16 16 Si 1.86300 * 109.46968 * 4.95641 * 14 13 12 17 17 C 1.32686 * 110.63311 * 359.82163 * 13 12 10 18 18 C 1.53006 * 109.47184 * 205.00003 * 5 3 2 19 19 C 1.52997 * 109.47127 * 180.02562 * 18 5 3 20 20 C 1.53002 * 109.46817 * 60.00361 * 19 18 5 21 21 H 1.09000 * 109.46986 * 179.97438 * 20 19 18 22 22 C 1.52997 * 109.47415 * 59.99873 * 20 19 18 23 23 C 1.52996 * 109.46972 * 299.99733 * 20 19 18 24 24 C 1.52997 * 109.47131 * 60.00459 * 23 20 19 25 25 H 1.08997 * 109.47356 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.46783 * 300.00167 * 1 2 3 27 27 H 1.08998 * 109.46819 * 59.99561 * 1 2 3 28 28 H 0.97009 * 120.00045 * 239.99988 * 6 5 3 29 29 H 1.09004 * 109.47166 * 124.96126 * 14 13 12 30 30 H 0.96697 * 113.99822 * 179.97438 * 15 14 13 31 31 H 1.48500 * 109.99766 * 178.68279 * 16 14 13 32 32 H 1.48490 * 110.00210 * 300.00217 * 16 14 13 33 33 H 1.07998 * 123.45677 * 179.97438 * 17 13 12 34 34 H 1.09001 * 109.46801 * 300.00442 * 18 5 3 35 35 H 1.09001 * 109.46998 * 60.00038 * 18 5 3 36 36 H 1.09002 * 109.47153 * 180.02562 * 19 18 5 37 37 H 1.08996 * 109.46952 * 300.00302 * 19 18 5 38 38 H 1.09002 * 109.47045 * 59.99931 * 22 20 19 39 39 H 1.08998 * 109.47171 * 179.97438 * 22 20 19 40 40 H 1.09000 * 109.47140 * 300.00024 * 22 20 19 41 41 H 1.09001 * 109.46993 * 180.02562 * 23 20 19 42 42 H 1.09000 * 109.47380 * 299.99696 * 23 20 19 43 43 H 1.09002 * 109.47153 * 179.97438 * 24 23 20 44 44 H 1.08993 * 109.47194 * 60.00154 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2746 0.0006 6 7 4.1129 0.1704 0.7931 7 6 3.8538 -1.1045 0.4413 8 8 3.1656 -1.3383 -0.5343 9 6 4.4028 -2.2128 1.2364 10 6 4.1815 -3.5259 0.9491 11 17 3.2285 -4.0961 -0.3852 12 16 4.9703 -4.5329 2.0755 13 6 5.6100 -3.1630 2.9665 14 6 6.4747 -3.2680 4.1963 15 8 5.7762 -2.7231 5.3177 16 14 6.8742 -5.0580 4.5236 17 6 5.2279 -2.0220 2.4074 18 6 4.0072 2.6070 0.6101 19 6 5.5351 2.6872 0.6101 20 6 6.0509 2.5884 -0.8269 21 1 7.1394 2.6460 -0.8270 22 6 5.4796 3.7416 -1.6543 23 6 5.6101 1.2561 -1.4364 24 6 4.0823 1.1759 -1.4364 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 4.6614 0.3569 1.5713 29 1 7.3991 -2.7122 4.0391 30 1 6.2740 -2.7579 6.1459 31 1 7.7526 -5.1727 5.7154 32 1 5.6221 -5.8266 4.7396 33 1 5.5048 -1.0501 2.7885 34 1 3.6005 3.4285 0.0204 35 1 3.6393 2.6777 1.6337 36 1 5.8491 3.6362 1.0448 37 1 5.9420 1.8657 1.1996 38 1 5.7936 4.6908 -1.2201 39 1 5.8475 3.6714 -2.6780 40 1 4.3911 3.6844 -1.6543 41 1 5.9780 1.1855 -2.4601 42 1 6.0172 0.4345 -0.8470 43 1 3.7682 0.2269 -1.8711 44 1 3.6753 1.9974 -2.0259 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_13431040.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:25 Heat of formation + Delta-G solvation = -109.340004 kcal Electronic energy + Delta-G solvation = -31679.175105 eV Core-core repulsion = 27330.465647 eV Total energy + Delta-G solvation = -4348.709459 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.083 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.53404 -40.76601 -39.72688 -38.67042 -37.92591 -37.51020 -37.04434 -35.47320 -32.23065 -31.94219 -31.45847 -29.08204 -27.77236 -26.85222 -25.84326 -24.35928 -23.87866 -22.19324 -21.55058 -20.67845 -19.59233 -19.26600 -18.82598 -18.55328 -18.00282 -17.71664 -17.44000 -16.66717 -16.60175 -16.26773 -15.77692 -15.50827 -15.40459 -15.21247 -14.96066 -14.56637 -14.45187 -14.35578 -14.26757 -14.00959 -13.95009 -13.75085 -13.61606 -13.29311 -13.08138 -13.02419 -12.68692 -12.61514 -12.55746 -12.40410 -12.08450 -11.99404 -11.98455 -11.83234 -11.81096 -11.34993 -11.21789 -11.11231 -10.70446 -10.52685 -10.22801 -9.82798 -9.63599 -5.03582 -0.57091 -0.15920 0.51503 0.77408 0.94490 1.09170 1.21052 1.54388 1.65663 1.90922 2.05654 2.30139 3.21310 3.29674 3.54511 3.60406 3.64654 3.89993 3.93903 4.01974 4.05373 4.09897 4.15226 4.19740 4.27726 4.39851 4.43179 4.46126 4.53621 4.56872 4.60512 4.79627 4.84323 4.86986 4.90402 5.01186 5.05605 5.09348 5.13187 5.20707 5.30490 5.30950 5.38063 5.41779 5.57079 6.43373 6.58264 6.59513 7.19951 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.331 6.331 3 C 0.450 3.550 4 O -0.536 6.536 5 C 0.207 3.793 6 N -0.702 5.702 7 C 0.573 3.427 8 O -0.510 6.510 9 C -0.160 4.160 10 C -0.136 4.136 11 Cl 0.007 6.993 12 S 0.252 5.748 13 C -0.189 4.189 14 C -0.031 4.031 15 O -0.550 6.550 16 Si 0.694 3.306 17 C -0.070 4.070 18 C -0.113 4.113 19 C -0.108 4.108 20 C -0.091 4.091 21 H 0.088 0.912 22 C -0.156 4.156 23 C -0.101 4.101 24 C -0.127 4.127 25 H 0.114 0.886 26 H 0.060 0.940 27 H 0.058 0.942 28 H 0.417 0.583 29 H 0.126 0.874 30 H 0.401 0.599 31 H -0.251 1.251 32 H -0.278 1.278 33 H 0.181 0.819 34 H 0.086 0.914 35 H 0.080 0.920 36 H 0.087 0.913 37 H 0.083 0.917 38 H 0.061 0.939 39 H 0.053 0.947 40 H 0.049 0.951 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.072 0.928 44 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.937 -0.545 4.171 9.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.245 6.245 3 C 0.293 3.707 4 O -0.425 6.425 5 C 0.118 3.882 6 N -0.360 5.360 7 C 0.359 3.641 8 O -0.386 6.386 9 C -0.179 4.179 10 C -0.283 4.283 11 Cl 0.036 6.964 12 S 0.517 5.483 13 C -0.306 4.306 14 C -0.143 4.143 15 O -0.362 6.362 16 Si 0.596 3.404 17 C -0.099 4.099 18 C -0.151 4.151 19 C -0.145 4.145 20 C -0.109 4.109 21 H 0.107 0.893 22 C -0.213 4.213 23 C -0.138 4.138 24 C -0.165 4.165 25 H 0.132 0.868 26 H 0.079 0.921 27 H 0.077 0.923 28 H 0.257 0.743 29 H 0.143 0.857 30 H 0.253 0.747 31 H -0.175 1.175 32 H -0.204 1.204 33 H 0.198 0.802 34 H 0.105 0.895 35 H 0.098 0.902 36 H 0.106 0.894 37 H 0.101 0.899 38 H 0.080 0.920 39 H 0.072 0.928 40 H 0.068 0.932 41 H 0.088 0.912 42 H 0.089 0.911 43 H 0.091 0.909 44 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 7.721 -2.642 3.639 8.935 hybrid contribution -1.088 2.085 0.749 2.468 sum 6.633 -0.557 4.388 7.972 Atomic orbital electron populations 1.23408 0.76706 1.04636 1.02035 1.86899 1.23263 1.32010 1.82327 1.24833 0.93154 0.81502 0.71223 1.90657 1.67593 1.37318 1.46966 1.20177 0.83236 0.89596 0.95188 1.45711 1.54556 1.03624 1.32061 1.17539 0.79936 0.82452 0.84200 1.90867 1.36485 1.84023 1.27178 1.20263 1.05656 0.91836 1.00147 1.25693 1.04287 0.98623 0.99683 1.98423 1.68474 1.87620 1.41926 1.83345 1.42342 1.06548 1.16049 1.23755 1.07915 0.96158 1.02752 1.24074 0.95960 1.10414 0.83871 1.86560 1.47226 1.82419 1.19949 0.94644 0.81182 0.74690 0.89851 1.21163 0.96077 1.00522 0.92144 1.21815 0.98685 0.92693 1.01858 1.21612 0.91932 1.04057 0.96920 1.21142 1.00981 0.94023 0.94744 0.89341 1.21980 1.00838 0.98446 1.00065 1.21455 0.92381 0.98162 1.01819 1.21935 0.98544 1.03459 0.92588 0.86773 0.92097 0.92329 0.74311 0.85703 0.74695 1.17471 1.20419 0.80156 0.89505 0.90167 0.89401 0.89856 0.91956 0.92768 0.93238 0.91242 0.91128 0.90916 0.90801 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.18 10.56 113.37 1.20 1.37 16 2 O -0.33 -3.67 6.72 -43.59 -0.29 -3.96 16 3 C 0.45 4.46 6.71 71.24 0.48 4.94 16 4 O -0.54 -7.67 15.84 21.95 0.35 -7.32 16 5 C 0.21 0.52 0.63 2.86 0.00 0.52 16 6 N -0.70 0.33 4.01 -429.92 -1.73 -1.39 16 7 C 0.57 2.76 6.72 86.55 0.58 3.34 16 8 O -0.51 -5.60 10.15 19.23 0.20 -5.40 16 9 C -0.16 -0.39 5.98 -19.84 -0.12 -0.51 16 10 C -0.14 -0.56 6.87 67.35 0.46 -0.09 16 11 Cl 0.01 0.05 27.20 -2.72 -0.07 -0.03 16 12 S 0.25 -0.16 20.19 -56.49 -1.14 -1.30 16 13 C -0.19 0.59 5.68 24.52 0.14 0.73 16 14 C -0.03 0.22 2.93 71.24 0.21 0.43 16 15 O -0.55 2.57 12.86 -148.98 -1.92 0.66 16 16 Si 0.69 -4.04 30.92 68.60 2.12 -1.92 16 17 C -0.07 0.23 9.75 22.70 0.22 0.45 16 18 C -0.11 0.18 4.04 30.60 0.12 0.30 16 19 C -0.11 0.73 5.28 30.59 0.16 0.89 16 20 C -0.09 0.44 3.19 -10.80 -0.03 0.41 16 21 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 22 C -0.16 0.42 8.50 71.98 0.61 1.03 16 23 C -0.10 0.19 5.29 30.59 0.16 0.36 16 24 C -0.13 -0.38 4.23 30.59 0.13 -0.25 16 25 H 0.11 0.37 8.14 -2.39 -0.02 0.35 16 26 H 0.06 0.37 8.13 -2.39 -0.02 0.35 16 27 H 0.06 0.41 8.13 -2.39 -0.02 0.39 16 28 H 0.42 -2.77 5.86 -92.70 -0.54 -3.31 16 29 H 0.13 -1.64 7.96 -2.39 -0.02 -1.66 16 30 H 0.40 -5.03 8.74 -74.06 -0.65 -5.68 16 31 H -0.25 0.75 7.11 99.48 0.71 1.45 16 32 H -0.28 -0.50 7.11 99.48 0.71 0.21 16 33 H 0.18 -1.66 7.10 -2.91 -0.02 -1.68 16 34 H 0.09 0.11 6.16 -2.39 -0.01 0.09 16 35 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 36 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 37 H 0.08 -0.84 6.86 -2.39 -0.02 -0.86 16 38 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 39 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 40 H 0.05 0.00 4.81 -2.39 -0.01 -0.02 16 41 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 42 H 0.07 -0.17 7.61 -2.39 -0.02 -0.19 16 43 H 0.07 0.59 6.17 -2.39 -0.01 0.58 16 44 H 0.07 0.30 6.43 -2.39 -0.02 0.28 16 Total: 0.00 -20.27 369.42 1.76 -18.51 By element: Atomic # 1 Polarization: -11.67 SS G_CDS: -0.08 Total: -11.75 kcal Atomic # 6 Polarization: 9.59 SS G_CDS: 4.33 Total: 13.91 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -1.73 Total: -1.39 kcal Atomic # 8 Polarization: -14.37 SS G_CDS: -1.67 Total: -16.03 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: 2.12 Total: -1.92 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -1.14 Total: -1.30 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -0.07 Total: -0.03 kcal Total: -20.27 1.76 -18.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13431040.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.829 kcal (2) G-P(sol) polarization free energy of solvation -20.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.340 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds