Wall clock time and date at job start Sat Mar 6 2021 20:51:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34231 * 117.00331 * 2 1 4 4 O 1.20827 * 119.99823 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00115 * 179.97438 * 3 2 1 6 6 N 1.46500 * 109.47209 * 324.99950 * 5 3 2 7 7 C 1.34777 * 119.99746 * 60.00234 * 6 5 3 8 8 O 1.21609 * 120.00421 * 359.97438 * 7 6 5 9 9 C 1.47383 * 119.99517 * 180.02562 * 7 6 5 10 10 C 1.36411 * 127.19269 * 359.68372 * 9 7 6 11 11 O 1.33655 * 108.39867 * 179.84078 * 10 9 7 12 12 C 1.34223 * 110.90251 * 0.44128 * 11 10 9 13 13 C 1.50699 * 125.43166 * 179.72671 * 12 11 10 14 14 O 1.42899 * 109.47164 * 245.00133 * 13 12 11 15 15 Si 1.86300 * 109.47626 * 5.00568 * 13 12 11 16 16 C 1.34176 * 109.12627 * 359.73305 * 12 11 10 17 17 C 1.52996 * 109.46990 * 204.99677 * 5 3 2 18 18 C 1.53000 * 109.47328 * 180.02562 * 17 5 3 19 19 C 1.52997 * 109.47060 * 60.00126 * 18 17 5 20 20 H 1.08996 * 109.47853 * 180.02562 * 19 18 17 21 21 C 1.52999 * 109.47317 * 59.99960 * 19 18 17 22 22 C 1.53006 * 109.47127 * 300.00449 * 19 18 17 23 23 C 1.52997 * 109.47164 * 59.99836 * 22 19 18 24 24 H 1.08998 * 109.47156 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.46798 * 300.00490 * 1 2 3 26 26 H 1.09004 * 109.46995 * 60.00139 * 1 2 3 27 27 H 0.97003 * 119.99532 * 240.00341 * 6 5 3 28 28 H 1.08003 * 125.80127 * 359.97438 * 10 9 7 29 29 H 1.09008 * 109.46668 * 125.00518 * 13 12 11 30 30 H 0.96698 * 113.99782 * 180.02562 * 14 13 12 31 31 H 1.48501 * 109.99857 * 299.99961 * 15 13 12 32 32 H 1.48499 * 109.99895 * 61.31466 * 15 13 12 33 33 H 1.07998 * 127.02396 * 180.02562 * 16 12 11 34 34 H 1.09004 * 109.47368 * 60.00232 * 17 5 3 35 35 H 1.09001 * 109.47372 * 300.00388 * 17 5 3 36 36 H 1.09002 * 109.47398 * 180.02562 * 18 17 5 37 37 H 1.09001 * 109.47194 * 300.00476 * 18 17 5 38 38 H 1.09002 * 109.46716 * 60.00091 * 21 19 18 39 39 H 1.09000 * 109.47486 * 180.02562 * 21 19 18 40 40 H 1.09001 * 109.47362 * 300.00732 * 21 19 18 41 41 H 1.09001 * 109.47002 * 299.99574 * 22 19 18 42 42 H 1.09000 * 109.47050 * 179.97438 * 22 19 18 43 43 H 1.09002 * 109.47045 * 180.02562 * 23 22 19 44 44 H 1.09001 * 109.47375 * 59.99966 * 23 22 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1129 0.1706 0.7933 7 6 3.8538 -1.1043 0.4413 8 8 3.1660 -1.3382 -0.5339 9 6 4.4032 -2.2151 1.2392 10 6 5.1905 -2.1225 2.3493 11 8 5.4691 -3.3590 2.7732 12 6 4.9011 -4.2778 1.9765 13 6 5.0086 -5.7709 2.1499 14 8 5.7173 -6.3293 1.0418 15 14 5.9251 -6.1487 3.7272 16 6 4.2224 -3.6546 1.0011 17 6 4.0070 2.6072 0.6100 18 6 5.5349 2.6875 0.6101 19 6 6.0508 2.5886 -0.8269 20 1 7.1393 2.6454 -0.8270 21 6 5.4795 3.7417 -1.6544 22 6 5.6101 1.2562 -1.4364 23 6 4.0822 1.1759 -1.4364 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 4.6612 0.3572 1.5714 28 1 5.5293 -1.2057 2.8089 29 1 4.0094 -6.2039 2.1976 30 1 5.8239 -7.2893 1.0866 31 1 7.2890 -5.5635 3.6748 32 1 5.1818 -5.6007 4.8902 33 1 3.6582 -4.1161 0.2042 34 1 3.6391 2.6779 1.6337 35 1 3.6003 3.4287 0.0203 36 1 5.8489 3.6366 1.0447 37 1 5.9419 1.8660 1.1996 38 1 5.7935 4.6909 -1.2202 39 1 5.8467 3.6710 -2.6783 40 1 4.3910 3.6845 -1.6544 41 1 6.0172 0.4347 -0.8469 42 1 5.9773 1.1859 -2.4603 43 1 3.7683 0.2265 -1.8703 44 1 3.6752 1.9975 -2.0259 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13456056.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:29 Heat of formation + Delta-G solvation = -124.718739 kcal Electronic energy + Delta-G solvation = -29449.852153 eV Core-core repulsion = 25336.204936 eV Total energy + Delta-G solvation = -4113.647217 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.74476 -42.35389 -40.35318 -39.27240 -37.97708 -37.23835 -35.48086 -34.05492 -32.47499 -32.05086 -31.20472 -28.96023 -27.78987 -26.68423 -25.20364 -24.23114 -23.93985 -22.22161 -21.61186 -20.85449 -19.68429 -18.96168 -18.74306 -18.58064 -17.89309 -17.35756 -17.20664 -17.04497 -16.73856 -16.25501 -15.94068 -15.78457 -15.57783 -15.10756 -14.88279 -14.72298 -14.39501 -14.21675 -14.11503 -14.04358 -13.76479 -13.68110 -13.56793 -13.33418 -12.94169 -12.73848 -12.72127 -12.63010 -12.20684 -12.10929 -11.76908 -11.57207 -11.47150 -11.35268 -11.16406 -10.82462 -10.75327 -10.55379 -10.18187 -9.80732 -5.14488 0.22097 0.88296 1.08930 1.17174 1.53939 1.63214 1.78678 1.95958 1.99379 2.42454 3.16542 3.30515 3.51437 3.53367 3.58528 3.63706 3.81740 3.90188 3.95285 4.04722 4.14916 4.18950 4.30599 4.33093 4.33518 4.38536 4.45196 4.51708 4.58592 4.69364 4.70475 4.75647 4.76840 4.81266 4.89660 4.98310 5.04998 5.07826 5.18605 5.21816 5.26799 5.32814 5.43681 5.54543 5.83353 6.37170 6.42836 6.84316 7.23514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.321 6.321 3 C 0.456 3.544 4 O -0.507 6.507 5 C 0.201 3.799 6 N -0.721 5.721 7 C 0.589 3.411 8 O -0.491 6.491 9 C -0.229 4.229 10 C 0.027 3.973 11 O -0.174 6.174 12 C -0.016 4.016 13 C -0.036 4.036 14 O -0.543 6.543 15 Si 0.711 3.289 16 C -0.115 4.115 17 C -0.117 4.117 18 C -0.113 4.113 19 C -0.095 4.095 20 H 0.076 0.924 21 C -0.155 4.155 22 C -0.107 4.107 23 C -0.132 4.132 24 H 0.100 0.900 25 H 0.059 0.941 26 H 0.062 0.938 27 H 0.401 0.599 28 H 0.212 0.788 29 H 0.095 0.905 30 H 0.391 0.609 31 H -0.249 1.249 32 H -0.253 1.253 33 H 0.164 0.836 34 H 0.076 0.924 35 H 0.099 0.901 36 H 0.076 0.924 37 H 0.063 0.937 38 H 0.056 0.944 39 H 0.056 0.944 40 H 0.061 0.939 41 H 0.065 0.935 42 H 0.071 0.929 43 H 0.095 0.905 44 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.875 -3.337 3.405 5.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.235 6.235 3 C 0.298 3.702 4 O -0.394 6.394 5 C 0.113 3.887 6 N -0.377 5.377 7 C 0.376 3.624 8 O -0.365 6.365 9 C -0.234 4.234 10 C -0.043 4.043 11 O -0.070 6.070 12 C -0.064 4.064 13 C -0.145 4.145 14 O -0.351 6.351 15 Si 0.610 3.390 16 C -0.135 4.135 17 C -0.154 4.154 18 C -0.150 4.150 19 C -0.114 4.114 20 H 0.094 0.906 21 C -0.212 4.212 22 C -0.145 4.145 23 C -0.171 4.171 24 H 0.119 0.881 25 H 0.077 0.923 26 H 0.080 0.920 27 H 0.237 0.763 28 H 0.229 0.771 29 H 0.113 0.887 30 H 0.240 0.760 31 H -0.173 1.173 32 H -0.177 1.177 33 H 0.182 0.818 34 H 0.095 0.905 35 H 0.118 0.882 36 H 0.095 0.905 37 H 0.082 0.918 38 H 0.076 0.924 39 H 0.076 0.924 40 H 0.079 0.921 41 H 0.084 0.916 42 H 0.090 0.910 43 H 0.114 0.886 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.698 -2.370 3.444 4.976 hybrid contribution -0.481 0.700 -0.059 0.852 sum 2.217 -1.669 3.385 4.377 Atomic orbital electron populations 1.23297 0.77207 1.03728 1.02158 1.86881 1.22497 1.31618 1.82526 1.24081 0.91814 0.82069 0.72284 1.90685 1.66669 1.36589 1.45506 1.20162 0.85307 0.88398 0.94823 1.45883 1.55174 1.04676 1.31944 1.17153 0.79788 0.81265 0.84194 1.90814 1.35731 1.83640 1.26303 1.21489 1.07095 0.94686 1.00130 1.24456 0.98072 0.86482 0.95332 1.83702 1.60014 1.14865 1.48446 1.21166 1.00782 0.90347 0.94124 1.23813 1.02491 0.86480 1.01753 1.86472 1.77608 1.26957 1.44013 0.95139 0.80102 0.89560 0.74230 1.22483 1.01368 0.90322 0.99327 1.21816 0.97151 0.94329 1.02138 1.21596 0.93717 1.02607 0.97130 1.21158 1.00396 0.95246 0.94556 0.90589 1.21976 1.01548 0.97757 0.99941 1.21496 0.94071 0.97237 1.01673 1.22027 0.97121 1.05095 0.92810 0.88137 0.92258 0.91956 0.76264 0.77120 0.88688 0.76005 1.17337 1.17741 0.81828 0.90549 0.88223 0.90519 0.91824 0.92448 0.92447 0.92057 0.91611 0.91015 0.88639 0.89986 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.14 16 2 O -0.32 -1.53 6.72 -47.37 -0.32 -1.84 16 3 C 0.46 1.93 6.71 36.01 0.24 2.17 16 4 O -0.51 -3.13 15.84 -18.75 -0.30 -3.42 16 5 C 0.20 0.22 0.63 -132.97 -0.08 0.14 16 6 N -0.72 0.07 4.03 -49.76 -0.20 -0.13 16 7 C 0.59 1.55 6.75 -12.54 -0.08 1.47 16 8 O -0.49 -2.84 12.23 -19.24 -0.24 -3.07 16 9 C -0.23 -0.45 6.31 -103.28 -0.65 -1.11 16 10 C 0.03 -0.01 11.61 30.07 0.35 0.34 16 11 O -0.17 -0.36 8.90 7.63 0.07 -0.29 16 12 C -0.02 -0.04 6.22 -35.74 -0.22 -0.26 16 13 C -0.04 0.03 2.96 36.00 0.11 0.13 16 14 O -0.54 0.34 12.86 -35.23 -0.45 -0.12 16 15 Si 0.71 -1.19 32.09 -169.99 -5.46 -6.64 16 16 C -0.12 -0.33 10.90 -37.45 -0.41 -0.74 16 17 C -0.12 0.08 4.04 -26.73 -0.11 -0.03 16 18 C -0.11 0.27 5.28 -26.73 -0.14 0.13 16 19 C -0.10 0.15 3.20 -90.62 -0.29 -0.14 16 20 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 21 C -0.16 0.17 8.50 37.16 0.32 0.48 16 22 C -0.11 0.04 5.29 -26.73 -0.14 -0.10 16 23 C -0.13 -0.17 4.23 -26.73 -0.11 -0.28 16 24 H 0.10 0.06 8.14 -51.93 -0.42 -0.37 16 25 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 26 H 0.06 0.14 8.13 -51.93 -0.42 -0.28 16 27 H 0.40 -1.24 6.29 -40.82 -0.26 -1.50 16 28 H 0.21 -1.04 7.47 -52.48 -0.39 -1.43 16 29 H 0.10 -0.29 7.96 -51.92 -0.41 -0.70 16 30 H 0.39 -2.39 8.74 45.56 0.40 -1.99 16 31 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 32 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 33 H 0.16 0.44 8.06 -52.49 -0.42 0.01 16 34 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.10 0.03 6.16 -51.93 -0.32 -0.29 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.06 -0.23 6.86 -51.93 -0.36 -0.59 16 38 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 40 H 0.06 -0.02 4.81 -51.93 -0.25 -0.27 16 41 H 0.07 -0.01 7.61 -51.93 -0.39 -0.40 16 42 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 43 H 0.10 0.34 6.16 -51.93 -0.32 0.02 16 44 H 0.08 0.10 6.43 -51.93 -0.33 -0.23 16 LS Contribution 349.86 15.07 5.27 5.27 Total: 0.00 -10.49 349.86 -7.85 -18.34 By element: Atomic # 1 Polarization: -5.38 SS G_CDS: -6.06 Total: -11.44 kcal Atomic # 6 Polarization: 3.52 SS G_CDS: -0.16 Total: 3.35 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.20 Total: -0.13 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -1.24 Total: -8.75 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.46 Total: -6.64 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -10.49 -7.85 -18.34 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13456056.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.384 kcal (2) G-P(sol) polarization free energy of solvation -10.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.846 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.335 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds