Wall clock time and date at job start Sat Mar 6 2021 20:51:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34229 * 117.00150 * 2 1 4 4 O 1.20823 * 119.99846 * 359.97438 * 3 2 1 5 5 C 1.50692 * 119.99791 * 179.97438 * 3 2 1 6 6 N 1.46506 * 109.47497 * 34.99875 * 5 3 2 7 7 C 1.34776 * 119.99932 * 300.00206 * 6 5 3 8 8 O 1.21697 * 119.99687 * 359.97438 * 7 6 5 9 9 C 1.46669 * 119.99729 * 179.97438 * 7 6 5 10 10 C 1.37877 * 126.23315 * 179.97438 * 9 7 6 11 11 C 1.50703 * 126.45461 * 359.97438 * 10 9 7 12 12 C 1.39832 * 107.08698 * 180.25077 * 10 9 7 13 13 C 1.35453 * 107.86731 * 359.62562 * 12 10 9 14 14 C 1.50699 * 125.56716 * 180.11916 * 13 12 10 15 15 O 1.42907 * 109.46714 * 120.30250 * 14 13 12 16 16 Si 1.86294 * 109.46913 * 0.30502 * 14 13 12 17 17 N 1.35536 * 108.86889 * 0.38027 * 13 12 10 18 18 C 1.53001 * 109.47509 * 274.99890 * 5 3 2 19 19 C 1.53001 * 109.47498 * 180.02562 * 18 5 3 20 20 C 1.53001 * 109.46999 * 59.99962 * 19 18 5 21 21 H 1.09001 * 109.46788 * 179.97438 * 20 19 18 22 22 C 1.52995 * 109.47038 * 60.00279 * 20 19 18 23 23 C 1.53000 * 109.47082 * 299.99768 * 20 19 18 24 24 C 1.53003 * 109.47049 * 155.00148 * 5 3 2 25 25 H 1.09004 * 109.47594 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.47371 * 300.00055 * 1 2 3 27 27 H 1.09004 * 109.47319 * 60.00262 * 1 2 3 28 28 H 0.96998 * 119.99895 * 120.00046 * 6 5 3 29 29 H 1.09002 * 109.47152 * 89.99958 * 11 10 9 30 30 H 1.09001 * 109.46980 * 330.00059 * 11 10 9 31 31 H 1.09004 * 109.47113 * 210.00040 * 11 10 9 32 32 H 1.08006 * 126.06737 * 179.77601 * 12 10 9 33 33 H 1.08997 * 109.46952 * 240.29921 * 14 13 12 34 34 H 0.96702 * 113.99222 * 180.02562 * 15 14 13 35 35 H 1.48499 * 109.99986 * 298.67508 * 16 14 13 36 36 H 1.48500 * 110.00342 * 59.99729 * 16 14 13 37 37 H 0.97001 * 125.68073 * 179.76134 * 17 13 12 38 38 H 1.09008 * 109.46754 * 300.00571 * 18 5 3 39 39 H 1.09001 * 109.46933 * 59.99859 * 18 5 3 40 40 H 1.08998 * 109.46805 * 299.99868 * 19 18 5 41 41 H 1.08997 * 109.46747 * 180.02562 * 19 18 5 42 42 H 1.09001 * 109.47090 * 299.99520 * 22 20 19 43 43 H 1.08997 * 109.47582 * 60.00206 * 22 20 19 44 44 H 1.08998 * 109.46800 * 180.02562 * 22 20 19 45 45 H 1.08998 * 109.47414 * 300.00517 * 23 20 19 46 46 H 1.09003 * 109.46662 * 180.02562 * 23 20 19 47 47 H 1.09003 * 109.46914 * 299.99895 * 24 5 3 48 48 H 1.08998 * 109.47349 * 59.99950 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 0.0006 6 7 4.1135 0.1702 -0.7912 7 6 3.8541 -1.1046 -0.4390 8 8 3.1656 -1.3381 0.5370 9 6 4.4015 -2.2103 -1.2320 10 6 4.2192 -3.5554 -0.9897 11 6 3.4230 -4.1625 0.1367 12 6 4.9176 -4.2500 -1.9822 13 6 5.4945 -3.3375 -2.8004 14 6 6.3407 -3.6531 -4.0068 15 8 5.7390 -3.0855 -5.1722 16 14 6.4673 -5.5005 -4.2104 17 7 5.1912 -2.0944 -2.3535 18 6 4.0817 1.1762 1.4378 19 6 5.6095 1.2568 1.4384 20 6 6.0502 2.5892 0.8289 21 1 7.1387 2.6468 0.8298 22 6 5.4783 3.7423 1.6560 23 6 5.5349 2.6877 -0.6084 24 6 4.0075 2.6069 -0.6091 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5138 -0.8900 28 1 4.6625 0.3564 -1.5689 29 1 2.3900 -4.3012 -0.1822 30 1 3.4505 -3.4980 1.0003 31 1 3.8527 -5.1272 0.4066 32 1 4.9832 -5.3235 -2.0805 33 1 7.3374 -3.2332 -3.8713 34 1 6.2309 -3.2499 -5.9883 35 1 7.1203 -6.0993 -3.0186 36 1 5.1148 -6.0850 -4.3959 37 1 5.4822 -1.2616 -2.7569 38 1 3.6745 1.9980 2.0269 39 1 3.7673 0.2272 1.8722 40 1 6.0169 0.4352 0.8493 41 1 5.9766 1.1861 2.4623 42 1 4.3898 3.6849 1.6555 43 1 5.8455 3.6721 2.6798 44 1 5.7919 4.6914 1.2214 45 1 5.9423 1.8661 -1.1976 46 1 5.8493 3.6367 -1.0427 47 1 3.6403 2.6771 -1.6331 48 1 3.6004 3.4287 -0.0200 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:33 Heat of formation + Delta-G solvation = -105.976435 kcal Electronic energy + Delta-G solvation = -31901.742857 eV Core-core repulsion = 27731.089411 eV Total energy + Delta-G solvation = -4170.653447 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.75417 -42.09146 -40.28656 -39.21354 -37.79665 -37.23499 -35.60282 -33.54282 -32.51561 -32.07009 -31.15626 -28.97043 -28.14823 -27.81367 -26.75824 -24.46552 -24.01619 -22.89464 -21.60499 -21.33528 -20.41768 -19.55199 -19.44194 -18.68007 -18.59600 -17.80946 -17.23628 -16.96308 -16.67717 -16.38345 -15.84995 -15.67087 -15.60045 -15.18251 -15.02595 -14.83756 -14.54271 -14.47697 -14.33780 -14.05253 -13.82560 -13.72813 -13.59507 -13.50130 -13.36317 -13.20440 -13.04408 -12.93226 -12.74729 -12.65796 -12.43625 -12.23004 -12.00215 -11.77729 -11.56478 -11.48987 -11.37582 -11.14950 -10.74217 -10.57567 -10.22134 -9.81051 -9.11714 -5.07399 0.39646 1.08940 1.16554 1.50818 1.65873 1.78537 1.95521 1.97898 2.09915 2.44805 3.15419 3.25329 3.49788 3.60634 3.70751 3.78254 3.87723 3.95907 4.03131 4.07000 4.12785 4.15371 4.30435 4.31839 4.34822 4.38498 4.39754 4.49443 4.66274 4.69095 4.72477 4.75831 4.78077 4.83323 4.87428 4.95406 5.01412 5.02834 5.05095 5.15809 5.21388 5.24082 5.29101 5.41093 5.43691 5.54418 5.66603 5.89824 6.23324 6.37743 6.43068 6.84088 7.19576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.320 6.320 3 C 0.456 3.544 4 O -0.507 6.507 5 C 0.201 3.799 6 N -0.725 5.725 7 C 0.592 3.408 8 O -0.484 6.484 9 C -0.051 4.051 10 C -0.062 4.062 11 C -0.091 4.091 12 C -0.208 4.208 13 C 0.072 3.928 14 C -0.059 4.059 15 O -0.550 6.550 16 Si 0.716 3.284 17 N -0.523 5.523 18 C -0.132 4.132 19 C -0.107 4.107 20 C -0.095 4.095 21 H 0.075 0.925 22 C -0.155 4.155 23 C -0.112 4.112 24 C -0.117 4.117 25 H 0.101 0.899 26 H 0.062 0.938 27 H 0.058 0.942 28 H 0.398 0.602 29 H 0.069 0.931 30 H 0.083 0.917 31 H 0.062 0.938 32 H 0.142 0.858 33 H 0.076 0.924 34 H 0.387 0.613 35 H -0.252 1.252 36 H -0.248 1.248 37 H 0.416 0.584 38 H 0.082 0.918 39 H 0.096 0.904 40 H 0.064 0.936 41 H 0.071 0.929 42 H 0.061 0.939 43 H 0.057 0.943 44 H 0.056 0.944 45 H 0.061 0.939 46 H 0.076 0.924 47 H 0.075 0.925 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.257 -0.780 -4.378 7.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.234 6.234 3 C 0.297 3.703 4 O -0.394 6.394 5 C 0.114 3.886 6 N -0.380 5.380 7 C 0.380 3.620 8 O -0.357 6.357 9 C -0.164 4.164 10 C -0.070 4.070 11 C -0.148 4.148 12 C -0.233 4.233 13 C -0.046 4.046 14 C -0.169 4.169 15 O -0.357 6.357 16 Si 0.614 3.386 17 N -0.119 5.119 18 C -0.170 4.170 19 C -0.144 4.144 20 C -0.113 4.113 21 H 0.094 0.906 22 C -0.212 4.212 23 C -0.150 4.150 24 C -0.155 4.155 25 H 0.119 0.881 26 H 0.080 0.920 27 H 0.077 0.923 28 H 0.233 0.767 29 H 0.088 0.912 30 H 0.102 0.898 31 H 0.081 0.919 32 H 0.159 0.841 33 H 0.094 0.906 34 H 0.236 0.764 35 H -0.176 1.176 36 H -0.172 1.172 37 H 0.254 0.746 38 H 0.100 0.900 39 H 0.115 0.885 40 H 0.083 0.917 41 H 0.090 0.910 42 H 0.080 0.920 43 H 0.076 0.924 44 H 0.076 0.924 45 H 0.080 0.920 46 H 0.095 0.905 47 H 0.094 0.906 48 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 4.843 -1.084 -2.916 5.756 hybrid contribution 0.074 1.128 -0.459 1.220 sum 4.917 0.044 -3.375 5.964 Atomic orbital electron populations 1.23298 0.77154 1.03772 1.02127 1.86876 1.22524 1.31531 1.82491 1.24049 0.91773 0.82114 0.72316 1.90685 1.66652 1.36609 1.45501 1.20156 0.85377 0.88321 0.94794 1.45946 1.55208 1.04971 1.31912 1.16915 0.79962 0.80908 0.84209 1.90836 1.35804 1.83092 1.25939 1.20177 1.06880 0.94993 0.94344 1.19865 0.99194 0.90201 0.97724 1.20380 0.98372 1.00285 0.95786 1.20448 1.05402 0.98412 0.99013 1.19884 1.03086 0.84455 0.97154 1.24524 0.95846 1.12678 0.83854 1.86477 1.53129 1.79295 1.16783 0.95214 0.83827 0.72417 0.87121 1.41822 1.39825 1.07923 1.22331 1.22026 0.97054 1.05154 0.92760 1.21487 0.94129 0.97164 1.01643 1.21156 1.00366 0.95291 0.94525 0.90626 1.21973 1.01563 0.97736 0.99940 1.21580 0.93764 1.02519 0.97127 1.21811 0.97111 0.94425 1.02139 0.88080 0.91957 0.92299 0.76726 0.91208 0.89776 0.91908 0.84093 0.90575 0.76450 1.17613 1.17187 0.74641 0.89966 0.88543 0.91747 0.90983 0.92039 0.92415 0.92441 0.92048 0.90499 0.90616 0.88171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.08 10.56 101.05 1.07 1.14 16 2 O -0.32 -1.50 6.72 -47.36 -0.32 -1.82 16 3 C 0.46 1.94 6.71 36.00 0.24 2.18 16 4 O -0.51 -3.16 15.84 -18.75 -0.30 -3.46 16 5 C 0.20 0.22 0.63 -132.97 -0.08 0.14 16 6 N -0.72 -0.09 4.03 -49.98 -0.20 -0.29 16 7 C 0.59 1.57 6.72 -12.86 -0.09 1.48 16 8 O -0.48 -2.40 10.05 -19.32 -0.19 -2.60 16 9 C -0.05 -0.13 7.06 -81.98 -0.58 -0.71 16 10 C -0.06 -0.22 6.21 -104.16 -0.65 -0.86 16 11 C -0.09 -0.25 9.83 36.01 0.35 0.11 16 12 C -0.21 -0.60 9.27 -39.98 -0.37 -0.97 16 13 C 0.07 0.11 6.51 -81.95 -0.53 -0.43 16 14 C -0.06 0.09 3.07 36.01 0.11 0.20 16 15 O -0.55 0.85 12.86 -35.23 -0.45 0.40 16 16 Si 0.72 -1.58 30.54 -169.99 -5.19 -6.78 16 17 N -0.52 -0.29 5.99 -5.70 -0.03 -0.32 16 18 C -0.13 -0.13 4.23 -26.73 -0.11 -0.25 16 19 C -0.11 0.07 5.29 -26.73 -0.14 -0.08 16 20 C -0.09 0.16 3.19 -90.62 -0.29 -0.13 16 21 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 22 C -0.16 0.19 8.50 37.15 0.32 0.50 16 23 C -0.11 0.26 5.28 -26.75 -0.14 0.12 16 24 C -0.12 0.07 4.03 -26.75 -0.11 -0.04 16 25 H 0.10 0.07 8.14 -51.93 -0.42 -0.35 16 26 H 0.06 0.15 8.13 -51.93 -0.42 -0.28 16 27 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 28 H 0.40 -0.92 6.45 -40.82 -0.26 -1.18 16 29 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 30 H 0.08 0.30 6.49 -51.93 -0.34 -0.03 16 31 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 32 H 0.14 0.30 6.17 -52.48 -0.32 -0.02 16 33 H 0.08 -0.27 7.96 -51.93 -0.41 -0.69 16 34 H 0.39 -2.53 8.74 45.56 0.40 -2.13 16 35 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 36 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 37 H 0.42 -0.91 8.19 -40.82 -0.33 -1.24 16 38 H 0.08 0.09 6.43 -51.92 -0.33 -0.25 16 39 H 0.10 0.29 6.16 -51.93 -0.32 -0.03 16 40 H 0.06 -0.02 7.60 -51.93 -0.39 -0.41 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.06 -0.03 4.81 -51.93 -0.25 -0.28 16 43 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 44 H 0.06 -0.08 8.14 -51.93 -0.42 -0.51 16 45 H 0.06 -0.21 6.86 -51.93 -0.36 -0.56 16 46 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 47 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 48 H 0.10 0.03 6.16 -51.93 -0.32 -0.29 16 LS Contribution 368.89 15.07 5.56 5.56 Total: 0.00 -9.06 368.89 -9.23 -18.29 By element: Atomic # 1 Polarization: -4.30 SS G_CDS: -7.09 Total: -11.39 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: -1.00 Total: 2.42 kcal Atomic # 7 Polarization: -0.38 SS G_CDS: -0.24 Total: -0.62 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -1.26 Total: -7.48 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.19 Total: -6.78 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -9.06 -9.23 -18.29 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.688 kcal (2) G-P(sol) polarization free energy of solvation -9.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.288 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds