Wall clock time and date at job start Sat Mar 6 2021 20:51:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34233 * 117.00366 * 2 1 4 4 O 1.20825 * 119.99684 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00662 * 180.02562 * 3 2 1 6 6 N 1.46507 * 109.46851 * 324.99925 * 5 3 2 7 7 C 1.34770 * 119.99912 * 59.99645 * 6 5 3 8 8 O 1.21278 * 120.00253 * 359.97438 * 7 6 5 9 9 C 1.50703 * 119.99761 * 180.02562 * 7 6 5 10 10 C 1.50697 * 109.47318 * 180.02562 * 9 7 6 11 11 C 1.34854 * 125.89261 * 274.69115 * 10 9 7 12 12 C 1.40892 * 107.41775 * 179.88245 * 11 10 9 13 13 C 1.34854 * 107.41595 * 0.37731 * 12 11 10 14 14 C 1.50703 * 125.88804 * 179.73298 * 13 12 11 15 15 O 1.42904 * 109.46741 * 245.04182 * 14 13 12 16 16 Si 1.86291 * 109.47201 * 5.04284 * 14 13 12 17 17 N 1.36341 * 108.21918 * 359.77099 * 13 12 11 18 18 C 1.52997 * 109.47238 * 204.99882 * 5 3 2 19 19 C 1.53006 * 109.47164 * 179.97438 * 18 5 3 20 20 C 1.52999 * 109.46626 * 59.99702 * 19 18 5 21 21 H 1.09002 * 109.46719 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.46991 * 60.00378 * 20 19 18 23 23 C 1.52997 * 109.47592 * 300.00035 * 20 19 18 24 24 C 1.52996 * 109.47165 * 60.00300 * 23 20 19 25 25 H 1.08998 * 109.47055 * 59.99863 * 1 2 3 26 26 H 1.08999 * 109.47345 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.47275 * 300.00618 * 1 2 3 28 28 H 0.97000 * 119.99609 * 240.00399 * 6 5 3 29 29 H 1.09002 * 109.47152 * 300.00159 * 9 7 6 30 30 H 1.09001 * 109.47438 * 60.00333 * 9 7 6 31 31 H 1.08001 * 126.29020 * 0.02932 * 11 10 9 32 32 H 1.08004 * 126.29125 * 180.17130 * 12 11 10 33 33 H 1.08994 * 109.47132 * 125.04371 * 14 13 12 34 34 H 0.96702 * 113.99622 * 60.01017 * 15 14 13 35 35 H 1.48506 * 110.00303 * 58.68311 * 16 14 13 36 36 H 1.48507 * 110.00299 * 180.02562 * 16 14 13 37 37 H 0.97003 * 125.63261 * 180.02562 * 17 13 12 38 38 H 1.09001 * 109.46922 * 59.99800 * 18 5 3 39 39 H 1.09000 * 109.47140 * 299.99500 * 18 5 3 40 40 H 1.08993 * 109.46955 * 180.02562 * 19 18 5 41 41 H 1.09000 * 109.47050 * 300.00004 * 19 18 5 42 42 H 1.09000 * 109.47611 * 59.99933 * 22 20 19 43 43 H 1.09001 * 109.47289 * 179.97438 * 22 20 19 44 44 H 1.09002 * 109.47153 * 299.99445 * 22 20 19 45 45 H 1.09000 * 109.47140 * 300.00346 * 23 20 19 46 46 H 1.09001 * 109.47375 * 180.02562 * 23 20 19 47 47 H 1.08992 * 109.47534 * 180.02562 * 24 23 20 48 48 H 1.08996 * 109.47134 * 59.99508 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1135 0.1704 0.7913 7 6 3.8541 -1.1043 0.4391 8 8 3.1674 -1.3372 -0.5329 9 6 4.4166 -2.2405 1.2540 10 6 3.9827 -3.5526 0.6532 11 6 2.8198 -4.1891 0.9000 12 6 2.8161 -5.3725 0.1354 13 6 3.9806 -5.4182 -0.5431 14 6 4.4118 -6.5127 -1.4850 15 8 5.5554 -7.1803 -0.9477 16 14 3.0214 -7.7345 -1.6954 17 7 4.7008 -4.3039 -0.2294 18 6 4.0074 2.6071 0.6091 19 6 5.5354 2.6869 0.6091 20 6 6.0511 2.5880 -0.8280 21 1 7.1397 2.6444 -0.8280 22 6 5.4801 3.7414 -1.6552 23 6 5.6100 1.2559 -1.4376 24 6 4.0822 1.1760 -1.4376 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 4.6624 0.3567 1.5690 29 1 5.5051 -2.1835 1.2541 30 1 4.0490 -2.1701 2.2778 31 1 2.0344 -3.8523 1.5605 32 1 2.0272 -6.1094 0.1018 33 1 4.6650 -6.0803 -2.4529 34 1 5.4024 -7.5900 -0.0853 35 1 1.8160 -7.0464 -2.2237 36 1 3.4342 -8.8194 -2.6217 37 1 5.5788 -4.0821 -0.5770 38 1 3.6402 2.6773 1.6330 39 1 3.6003 3.4288 0.0199 40 1 5.8496 3.6357 1.0438 41 1 5.9422 1.8652 1.1985 42 1 5.7944 4.6905 -1.2210 43 1 5.8479 3.6712 -2.6789 44 1 4.3916 3.6845 -1.6552 45 1 6.0168 0.4341 -0.8482 46 1 5.9779 1.1852 -2.4613 47 1 3.7679 0.2268 -1.8715 48 1 3.6754 1.9977 -2.0269 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:35 Heat of formation + Delta-G solvation = -104.120924 kcal Electronic energy + Delta-G solvation = -31408.346609 eV Core-core repulsion = 27237.773623 eV Total energy + Delta-G solvation = -4170.572986 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.57341 -42.14291 -40.52379 -39.34861 -37.66704 -37.50650 -35.43517 -33.33232 -31.99884 -31.88182 -31.61444 -29.23732 -28.99049 -27.74683 -25.27654 -24.44172 -23.92045 -22.43243 -21.40119 -21.28934 -20.91996 -19.59605 -18.90480 -18.76176 -18.38910 -17.73786 -17.44412 -16.99977 -16.74202 -16.29518 -16.13887 -15.56784 -15.50016 -15.22873 -15.02397 -14.88912 -14.56491 -14.48003 -14.31846 -14.02939 -13.99101 -13.80125 -13.77631 -13.65760 -13.45601 -13.29386 -13.06422 -12.73610 -12.66753 -12.62253 -12.12171 -12.07973 -11.96645 -11.84837 -11.82364 -11.40002 -11.25183 -11.14804 -10.67685 -10.59846 -10.16962 -9.73222 -8.89965 -4.95716 0.92286 1.18403 1.28410 1.58701 1.70536 1.84473 1.90251 1.96801 2.27412 2.55078 3.29416 3.52379 3.54258 3.62618 3.75715 3.84193 3.92752 3.97383 4.05994 4.14141 4.16687 4.20148 4.25023 4.28313 4.38778 4.40859 4.47179 4.54424 4.55806 4.59333 4.69053 4.79042 4.82347 4.85244 4.86110 5.01022 5.05265 5.08810 5.19529 5.28735 5.31069 5.31862 5.35366 5.35559 5.37785 5.51953 6.06262 6.19519 6.53343 6.59969 6.72030 6.74022 7.34444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.328 6.328 3 C 0.449 3.551 4 O -0.539 6.539 5 C 0.206 3.794 6 N -0.709 5.709 7 C 0.509 3.491 8 O -0.528 6.528 9 C -0.064 4.064 10 C 0.039 3.961 11 C -0.197 4.197 12 C -0.201 4.201 13 C -0.022 4.022 14 C -0.051 4.051 15 O -0.557 6.557 16 Si 0.806 3.194 17 N -0.536 5.536 18 C -0.113 4.113 19 C -0.107 4.107 20 C -0.092 4.092 21 H 0.087 0.913 22 C -0.157 4.157 23 C -0.099 4.099 24 C -0.126 4.126 25 H 0.052 0.948 26 H 0.116 0.884 27 H 0.063 0.937 28 H 0.422 0.578 29 H 0.129 0.871 30 H 0.139 0.861 31 H 0.138 0.862 32 H 0.150 0.850 33 H 0.099 0.901 34 H 0.397 0.603 35 H -0.296 1.296 36 H -0.294 1.294 37 H 0.418 0.582 38 H 0.082 0.918 39 H 0.081 0.919 40 H 0.085 0.915 41 H 0.087 0.913 42 H 0.061 0.939 43 H 0.051 0.949 44 H 0.048 0.952 45 H 0.074 0.926 46 H 0.064 0.936 47 H 0.068 0.932 48 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.265 -0.471 6.497 8.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.242 6.242 3 C 0.291 3.709 4 O -0.429 6.429 5 C 0.117 3.883 6 N -0.367 5.367 7 C 0.296 3.704 8 O -0.402 6.402 9 C -0.104 4.104 10 C -0.075 4.075 11 C -0.221 4.221 12 C -0.226 4.226 13 C -0.135 4.135 14 C -0.160 4.160 15 O -0.365 6.365 16 Si 0.711 3.289 17 N -0.131 5.131 18 C -0.150 4.150 19 C -0.144 4.144 20 C -0.110 4.110 21 H 0.106 0.894 22 C -0.214 4.214 23 C -0.137 4.137 24 C -0.165 4.165 25 H 0.071 0.929 26 H 0.135 0.865 27 H 0.082 0.918 28 H 0.261 0.739 29 H 0.147 0.853 30 H 0.157 0.843 31 H 0.156 0.844 32 H 0.168 0.832 33 H 0.117 0.883 34 H 0.247 0.753 35 H -0.223 1.223 36 H -0.222 1.222 37 H 0.255 0.745 38 H 0.101 0.899 39 H 0.099 0.901 40 H 0.104 0.896 41 H 0.106 0.894 42 H 0.081 0.919 43 H 0.071 0.929 44 H 0.067 0.933 45 H 0.093 0.907 46 H 0.083 0.917 47 H 0.087 0.913 48 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 4.397 -0.523 4.641 6.415 hybrid contribution 0.028 1.004 -0.498 1.121 sum 4.425 0.481 4.144 6.081 Atomic orbital electron populations 1.23411 0.76747 1.04740 1.01900 1.86899 1.23188 1.31832 1.82284 1.24899 0.93261 0.81516 0.71177 1.90658 1.67709 1.37476 1.47051 1.20077 0.83155 0.90127 0.94957 1.45921 1.54744 1.03849 1.32229 1.20990 0.80050 0.83934 0.85444 1.90767 1.36912 1.84146 1.28418 1.20207 1.03993 0.85836 1.00406 1.19840 0.94265 0.95254 0.98156 1.20788 0.98171 0.97288 1.05874 1.20890 0.98037 1.01096 1.02589 1.20903 0.94928 0.92385 1.05304 1.24852 0.98804 0.96369 0.96010 1.86443 1.35709 1.73142 1.41253 0.93109 0.72802 0.76498 0.86448 1.41863 1.17837 1.17567 1.35852 1.21796 0.98548 0.92816 1.01888 1.21603 0.92015 1.04145 0.96652 1.21154 1.00933 0.93975 0.94968 0.89424 1.21984 1.00794 0.98597 1.00026 1.21444 0.92347 0.98268 1.01605 1.21904 0.98517 1.02975 0.93075 0.92897 0.86530 0.91838 0.73888 0.85256 0.84283 0.84406 0.83248 0.88311 0.75256 1.22327 1.22161 0.74454 0.89939 0.90082 0.89640 0.89418 0.91944 0.92942 0.93328 0.90719 0.91684 0.91338 0.91423 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.14 10.56 113.37 1.20 1.34 16 2 O -0.33 -3.06 6.72 -43.69 -0.29 -3.36 16 3 C 0.45 3.87 6.71 71.23 0.48 4.35 16 4 O -0.54 -7.39 15.84 21.97 0.35 -7.04 16 5 C 0.21 0.16 0.63 2.85 0.00 0.17 16 6 N -0.71 3.32 4.03 -426.33 -1.72 1.60 16 7 C 0.51 -0.32 6.76 87.66 0.59 0.28 16 8 O -0.53 -4.58 11.28 20.41 0.23 -4.35 16 9 C -0.06 0.42 6.24 29.10 0.18 0.60 16 10 C 0.04 0.03 5.66 41.08 0.23 0.26 16 11 C -0.20 -0.69 10.77 22.14 0.24 -0.45 16 12 C -0.20 -0.67 9.37 22.14 0.21 -0.46 16 13 C -0.02 -0.06 6.50 41.08 0.27 0.21 16 14 C -0.05 -0.05 3.08 71.24 0.22 0.17 16 15 O -0.56 -0.08 12.88 -148.98 -1.92 -2.00 16 16 Si 0.81 -0.29 30.60 68.60 2.10 1.80 16 17 N -0.54 -0.50 6.07 -171.11 -1.04 -1.53 16 18 C -0.11 0.30 4.04 30.60 0.12 0.43 16 19 C -0.11 0.83 5.28 30.60 0.16 0.99 16 20 C -0.09 0.49 3.19 -10.80 -0.03 0.46 16 21 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 22 C -0.16 0.40 8.50 71.98 0.61 1.01 16 23 C -0.10 0.29 5.29 30.59 0.16 0.45 16 24 C -0.13 -0.29 4.23 30.59 0.13 -0.17 16 25 H 0.05 0.36 8.13 -2.39 -0.02 0.34 16 26 H 0.12 0.20 8.14 -2.39 -0.02 0.18 16 27 H 0.06 0.27 8.13 -2.39 -0.02 0.25 16 28 H 0.42 -4.95 7.32 -92.71 -0.68 -5.62 16 29 H 0.13 -1.62 8.14 -2.39 -0.02 -1.64 16 30 H 0.14 -1.52 8.14 -2.39 -0.02 -1.54 16 31 H 0.14 0.26 8.06 -2.91 -0.02 0.24 16 32 H 0.15 0.00 6.24 -2.91 -0.02 -0.02 16 33 H 0.10 0.27 7.96 -2.39 -0.02 0.25 16 34 H 0.40 -3.03 8.70 -74.06 -0.64 -3.67 16 35 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 36 H -0.29 -1.71 7.11 99.48 0.71 -1.00 16 37 H 0.42 -1.00 8.96 -92.71 -0.83 -1.83 16 38 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.08 0.09 6.16 -2.39 -0.01 0.07 16 40 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 41 H 0.09 -1.04 6.86 -2.39 -0.02 -1.05 16 42 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 43 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 44 H 0.05 0.01 4.81 -2.39 -0.01 0.00 16 45 H 0.07 -0.36 7.60 -2.39 -0.02 -0.37 16 46 H 0.06 -0.12 8.14 -2.39 -0.02 -0.13 16 47 H 0.07 0.54 6.17 -2.39 -0.01 0.53 16 48 H 0.07 0.30 6.43 -2.39 -0.02 0.28 16 Total: 0.00 -24.62 373.26 1.37 -23.25 By element: Atomic # 1 Polarization: -16.89 SS G_CDS: -1.10 Total: -18.00 kcal Atomic # 6 Polarization: 4.85 SS G_CDS: 4.77 Total: 9.62 kcal Atomic # 7 Polarization: 2.83 SS G_CDS: -2.76 Total: 0.07 kcal Atomic # 8 Polarization: -15.12 SS G_CDS: -1.63 Total: -16.75 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: 2.10 Total: 1.80 kcal Total: -24.62 1.37 -23.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.871 kcal (2) G-P(sol) polarization free energy of solvation -24.621 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.492 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.250 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds