Wall clock time and date at job start Sat Mar 6 2021 20:51:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34236 * 116.99438 * 2 1 4 4 O 1.20824 * 120.00388 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99381 * 179.97438 * 3 2 1 6 6 N 1.46497 * 109.47834 * 34.99591 * 5 3 2 7 7 C 1.34774 * 119.99941 * 300.00148 * 6 5 3 8 8 O 1.21286 * 120.00024 * 0.02562 * 7 6 5 9 9 C 1.50699 * 120.00155 * 179.97438 * 7 6 5 10 10 C 1.53045 * 109.19015 * 179.22506 * 9 7 6 11 11 C 1.53535 * 108.56036 * 169.74509 * 10 9 7 12 12 N 1.47032 * 107.66052 * 299.05109 * 11 10 9 13 13 C 1.38918 * 118.92836 * 43.43052 * 12 11 10 14 14 C 1.31115 * 121.85435 * 347.18899 * 13 12 11 15 15 C 1.50699 * 118.54938 * 180.16576 * 14 13 12 16 16 O 1.42901 * 109.46830 * 119.72712 * 15 14 13 17 17 Si 1.86298 * 109.46950 * 359.73150 * 15 14 13 18 18 C 1.53007 * 109.46922 * 274.99208 * 5 3 2 19 19 C 1.52999 * 109.46819 * 180.02562 * 18 5 3 20 20 C 1.53001 * 109.47325 * 60.00603 * 19 18 5 21 21 H 1.08994 * 109.47261 * 179.97438 * 20 19 18 22 22 C 1.53003 * 109.47132 * 59.99458 * 20 19 18 23 23 C 1.53002 * 109.46656 * 299.99832 * 20 19 18 24 24 C 1.52993 * 109.47381 * 59.99888 * 23 20 19 25 25 H 1.09001 * 109.46750 * 180.02562 * 1 2 3 26 26 H 1.08994 * 109.47657 * 300.00333 * 1 2 3 27 27 H 1.09001 * 109.46790 * 60.00735 * 1 2 3 28 28 H 0.96994 * 120.00222 * 119.99278 * 6 5 3 29 29 H 1.08991 * 109.32765 * 59.65630 * 9 7 6 30 30 H 1.09004 * 109.62184 * 289.46429 * 10 9 7 31 31 H 1.09001 * 109.62245 * 50.02073 * 10 9 7 32 32 H 1.09003 * 109.82589 * 58.58871 * 11 10 9 33 33 H 1.08999 * 109.82465 * 179.50998 * 11 10 9 34 34 H 0.97003 * 120.55716 * 223.69191 * 12 11 10 35 35 H 1.08004 * 119.07371 * 166.94360 * 13 12 11 36 36 H 1.08991 * 109.47351 * 239.72860 * 15 14 13 37 37 H 0.96708 * 114.00246 * 299.99864 * 16 15 14 38 38 H 1.48506 * 109.99834 * 180.02562 * 17 15 14 39 39 H 1.48502 * 110.00011 * 301.31529 * 17 15 14 40 40 H 1.08997 * 109.47422 * 300.00447 * 18 5 3 41 41 H 1.09004 * 109.46968 * 60.00831 * 18 5 3 42 42 H 1.09002 * 109.47190 * 299.99785 * 19 18 5 43 43 H 1.09012 * 109.46782 * 180.02562 * 19 18 5 44 44 H 1.09002 * 109.47015 * 300.00127 * 22 20 19 45 45 H 1.09000 * 109.46666 * 60.00101 * 22 20 19 46 46 H 1.08997 * 109.46661 * 180.02562 * 22 20 19 47 47 H 1.09003 * 109.46884 * 299.99206 * 23 20 19 48 48 H 1.09000 * 109.46603 * 180.02562 * 23 20 19 49 49 H 1.08995 * 109.47224 * 179.97438 * 24 23 20 50 50 H 1.08997 * 109.47004 * 59.99881 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2750 0.0006 6 7 4.1136 0.1705 -0.7911 7 6 3.8543 -1.1043 -0.4388 8 8 3.1674 -1.3371 0.5333 9 6 4.4168 -2.2405 -1.2535 10 6 3.9880 -3.5693 -0.6269 11 6 4.3434 -4.7045 -1.5976 12 7 3.6003 -4.4737 -2.8452 13 6 3.5415 -3.1863 -3.3639 14 6 3.9086 -2.1406 -2.6634 15 6 3.8105 -0.7776 -3.2987 16 8 2.9246 0.0419 -2.5334 17 14 3.1556 -0.9473 -5.0345 18 6 4.0815 1.1766 1.4379 19 6 5.6094 1.2573 1.4385 20 6 6.0500 2.5897 0.8290 21 1 7.1384 2.6473 0.8298 22 6 5.4779 3.7428 1.6560 23 6 5.5347 2.6881 -0.6083 24 6 4.0069 2.6073 -0.6090 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5137 -0.8901 28 1 4.6625 0.3567 -1.5688 29 1 5.5049 -2.1777 -1.2569 30 1 4.5144 -3.7160 0.3163 31 1 2.9122 -3.5610 -0.4515 32 1 5.4146 -4.6971 -1.7989 33 1 4.0541 -5.6632 -1.1671 34 1 3.1549 -5.2076 -3.2969 35 1 3.1871 -3.0432 -4.3741 36 1 4.7982 -0.3176 -3.3264 37 1 2.0252 -0.3071 -2.4663 38 1 3.0547 0.3901 -5.6723 39 1 4.0512 -1.8233 -5.8319 40 1 3.6743 1.9983 2.0269 41 1 3.7673 0.2275 1.8723 42 1 6.0169 0.4357 0.8494 43 1 5.9765 1.1867 2.4625 44 1 4.3894 3.6853 1.6554 45 1 5.8450 3.6726 2.6799 46 1 5.7915 4.6920 1.2214 47 1 5.9423 1.8665 -1.1974 48 1 5.8490 3.6371 -1.0427 49 1 3.6398 2.6779 -1.6328 50 1 3.5994 3.4289 -0.0198 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_15608500.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:41 Heat of formation + Delta-G solvation = -95.546068 kcal Electronic energy + Delta-G solvation = -34418.631982 eV Core-core repulsion = 30221.119351 eV Total energy + Delta-G solvation = -4197.512631 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.192 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.44979 -40.92442 -39.90602 -38.65175 -37.61938 -37.28869 -35.08490 -33.45090 -32.65021 -31.91394 -31.37799 -28.93135 -27.71368 -27.13872 -25.74436 -24.25986 -23.84419 -23.15151 -21.98655 -21.18309 -19.59512 -19.15960 -18.85384 -18.65844 -18.01664 -17.71547 -17.33104 -16.88148 -16.69849 -16.04735 -15.99805 -15.79036 -15.42201 -15.36028 -14.97711 -14.74850 -14.71073 -14.39230 -14.32620 -14.00418 -13.96575 -13.68674 -13.64019 -13.39442 -13.21931 -13.10833 -12.84313 -12.64591 -12.54442 -12.50803 -12.10623 -12.03821 -11.81914 -11.78880 -11.68242 -11.61624 -11.34578 -11.26315 -11.16065 -11.03039 -10.37116 -10.33811 -9.39972 -8.34008 -4.94519 1.18572 1.34773 1.48457 1.64188 1.82690 2.01636 2.11846 2.43547 2.73943 3.45181 3.61304 3.68787 3.74390 3.81264 3.92968 4.02396 4.05586 4.15159 4.18866 4.28505 4.32047 4.34454 4.35515 4.42835 4.46223 4.47892 4.56643 4.62391 4.66056 4.71906 4.74875 4.83964 4.87873 4.88673 4.92203 4.95087 5.07270 5.10556 5.13702 5.25062 5.32135 5.33617 5.39017 5.40575 5.48892 5.53132 5.56711 5.64479 6.39851 6.70353 6.84288 6.86628 7.02740 7.61139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.319 6.319 3 C 0.466 3.534 4 O -0.549 6.549 5 C 0.211 3.789 6 N -0.670 5.670 7 C 0.532 3.468 8 O -0.548 6.548 9 C -0.033 4.033 10 C -0.113 4.113 11 C 0.121 3.879 12 N -0.747 5.747 13 C 0.156 3.844 14 C -0.291 4.291 15 C -0.052 4.052 16 O -0.544 6.544 17 Si 0.747 3.253 18 C -0.129 4.129 19 C -0.099 4.099 20 C -0.091 4.091 21 H 0.085 0.915 22 C -0.154 4.154 23 C -0.107 4.107 24 C -0.108 4.108 25 H 0.117 0.883 26 H 0.046 0.954 27 H 0.064 0.936 28 H 0.411 0.589 29 H 0.097 0.903 30 H 0.073 0.927 31 H 0.061 0.939 32 H 0.063 0.937 33 H 0.095 0.905 34 H 0.412 0.588 35 H 0.142 0.858 36 H 0.112 0.888 37 H 0.371 0.629 38 H -0.309 1.309 39 H -0.287 1.287 40 H 0.066 0.934 41 H 0.073 0.927 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.049 0.951 45 H 0.055 0.945 46 H 0.059 0.941 47 H 0.075 0.925 48 H 0.080 0.920 49 H 0.074 0.926 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.744 -5.182 -3.486 6.822 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.232 6.232 3 C 0.309 3.691 4 O -0.440 6.440 5 C 0.121 3.879 6 N -0.327 5.327 7 C 0.320 3.680 8 O -0.425 6.425 9 C -0.054 4.054 10 C -0.152 4.152 11 C -0.003 4.003 12 N -0.377 5.377 13 C 0.034 3.966 14 C -0.303 4.303 15 C -0.164 4.164 16 O -0.350 6.350 17 Si 0.656 3.344 18 C -0.168 4.168 19 C -0.137 4.137 20 C -0.110 4.110 21 H 0.103 0.897 22 C -0.211 4.211 23 C -0.145 4.145 24 C -0.146 4.146 25 H 0.136 0.864 26 H 0.065 0.935 27 H 0.083 0.917 28 H 0.252 0.748 29 H 0.115 0.885 30 H 0.092 0.908 31 H 0.080 0.920 32 H 0.082 0.918 33 H 0.113 0.887 34 H 0.248 0.752 35 H 0.159 0.841 36 H 0.129 0.871 37 H 0.220 0.780 38 H -0.238 1.238 39 H -0.214 1.214 40 H 0.085 0.915 41 H 0.091 0.909 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.068 0.932 45 H 0.074 0.926 46 H 0.078 0.922 47 H 0.093 0.907 48 H 0.098 0.902 49 H 0.093 0.907 50 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.785 -4.622 -3.486 6.424 hybrid contribution -0.090 0.228 -0.135 0.280 sum 2.695 -4.394 -3.620 6.299 Atomic orbital electron populations 1.23398 0.77292 1.04564 1.01739 1.86922 1.22537 1.31517 1.82270 1.24620 0.92799 0.81363 0.70325 1.90640 1.67772 1.37750 1.47793 1.19875 0.83918 0.89994 0.94065 1.45914 1.53093 1.03465 1.30259 1.20515 0.79467 0.83847 0.84194 1.90681 1.38415 1.84398 1.29018 1.19621 1.00632 0.93109 0.92073 1.21622 1.02100 0.93280 0.98187 1.21657 0.96079 0.98568 0.84006 1.44646 1.58633 1.07383 1.27052 1.20529 0.95116 0.84981 0.96022 1.20465 1.19231 0.94612 0.95956 1.24659 0.96695 0.90288 1.04773 1.86769 1.24247 1.50174 1.73821 0.93910 0.88526 0.78009 0.73930 1.21949 0.98131 1.03095 0.93576 1.21435 0.92909 0.97811 1.01539 1.21142 1.00713 0.94403 0.94699 0.89707 1.21962 1.00855 0.98289 1.00025 1.21566 0.92810 1.03257 0.96826 1.21672 0.97794 0.93507 1.01602 0.86445 0.93534 0.91745 0.74775 0.88494 0.90812 0.91970 0.91834 0.88717 0.75236 0.84090 0.87093 0.77976 1.23789 1.21393 0.91527 0.90854 0.91324 0.91306 0.93241 0.92591 0.92163 0.90660 0.90184 0.90725 0.90472 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.09 10.56 113.37 1.20 1.29 16 2 O -0.32 -2.59 5.88 -43.22 -0.25 -2.84 16 3 C 0.47 4.45 5.75 71.24 0.41 4.86 16 4 O -0.55 -8.24 15.84 21.97 0.35 -7.89 16 5 C 0.21 0.84 0.49 2.86 0.00 0.84 16 6 N -0.67 -0.11 1.61 -426.32 -0.68 -0.79 16 7 C 0.53 1.35 5.22 87.66 0.46 1.81 16 8 O -0.55 -5.11 11.03 20.39 0.22 -4.88 16 9 C -0.03 0.06 2.75 -12.43 -0.03 0.02 16 10 C -0.11 0.16 4.91 30.79 0.15 0.31 16 11 C 0.12 -0.70 7.16 86.46 0.62 -0.08 16 12 N -0.75 4.74 5.83 -345.90 -2.02 2.73 16 13 C 0.16 -0.82 9.63 83.42 0.80 -0.02 16 14 C -0.29 1.12 5.26 -16.76 -0.09 1.03 16 15 C -0.05 0.23 1.83 71.24 0.13 0.36 16 16 O -0.54 0.94 6.84 -148.68 -1.02 -0.08 16 17 Si 0.75 -2.84 29.68 68.60 2.04 -0.80 16 18 C -0.13 -0.61 4.23 30.60 0.13 -0.48 16 19 C -0.10 -0.01 5.29 30.59 0.16 0.15 16 20 C -0.09 0.17 3.20 -10.79 -0.03 0.13 16 21 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 22 C -0.15 0.02 8.50 71.98 0.61 0.63 16 23 C -0.11 0.27 5.28 30.59 0.16 0.43 16 24 C -0.11 -0.22 4.04 30.59 0.12 -0.10 16 25 H 0.12 -0.08 8.14 -2.39 -0.02 -0.10 16 26 H 0.05 0.28 8.13 -2.39 -0.02 0.26 16 27 H 0.06 0.16 8.13 -2.39 -0.02 0.14 16 28 H 0.41 -1.11 4.42 -92.71 -0.41 -1.52 16 29 H 0.10 -0.35 8.14 -2.39 -0.02 -0.37 16 30 H 0.07 -0.05 8.14 -2.38 -0.02 -0.07 16 31 H 0.06 0.20 7.74 -2.39 -0.02 0.18 16 32 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 33 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 34 H 0.41 -4.07 8.96 -92.71 -0.83 -4.90 16 35 H 0.14 -1.16 4.37 -2.91 -0.01 -1.18 16 36 H 0.11 -0.67 7.08 -2.39 -0.02 -0.69 16 37 H 0.37 -0.99 8.06 -74.05 -0.60 -1.59 16 38 H -0.31 -1.59 7.11 99.48 0.71 -0.88 16 39 H -0.29 -0.12 7.10 99.48 0.71 0.58 16 40 H 0.07 0.41 6.43 -2.39 -0.02 0.40 16 41 H 0.07 0.67 6.17 -2.39 -0.01 0.66 16 42 H 0.07 -0.03 7.60 -2.39 -0.02 -0.05 16 43 H 0.07 0.01 8.14 -2.38 -0.02 -0.01 16 44 H 0.05 0.13 4.81 -2.39 -0.01 0.12 16 45 H 0.05 -0.01 8.14 -2.39 -0.02 -0.03 16 46 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 47 H 0.07 -0.36 6.86 -2.39 -0.02 -0.38 16 48 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 49 H 0.07 0.23 8.14 -2.39 -0.02 0.21 16 50 H 0.08 0.39 6.16 -2.39 -0.01 0.38 16 Total: 0.00 -16.71 359.48 2.62 -14.09 By element: Atomic # 1 Polarization: -9.92 SS G_CDS: -0.82 Total: -10.73 kcal Atomic # 6 Polarization: 6.40 SS G_CDS: 4.80 Total: 11.20 kcal Atomic # 7 Polarization: 4.64 SS G_CDS: -2.70 Total: 1.93 kcal Atomic # 8 Polarization: -14.99 SS G_CDS: -0.70 Total: -15.69 kcal Atomic # 14 Polarization: -2.84 SS G_CDS: 2.04 Total: -0.80 kcal Total: -16.71 2.62 -14.09 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_15608500.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.454 kcal (2) G-P(sol) polarization free energy of solvation -16.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.093 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds