Wall clock time and date at job start Sat Mar 6 2021 20:51:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34226 * 117.00234 * 2 1 4 4 O 1.20834 * 119.99996 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00197 * 180.02562 * 3 2 1 6 6 N 1.46498 * 109.46930 * 324.99958 * 5 3 2 7 7 C 1.34782 * 119.99958 * 60.00240 * 6 5 3 8 8 O 1.21286 * 119.99576 * 359.97438 * 7 6 5 9 9 C 1.50692 * 120.00090 * 179.97438 * 7 6 5 10 10 O 1.42902 * 109.47301 * 180.02562 * 9 7 6 11 11 C 1.35903 * 117.00224 * 180.02562 * 10 9 7 12 12 C 1.38703 * 120.05406 * 179.72763 * 11 10 9 13 13 C 1.50701 * 120.03206 * 0.24353 * 12 11 10 14 14 O 1.42903 * 109.47376 * 285.00928 * 13 12 11 15 15 Si 1.86293 * 109.47333 * 165.00411 * 13 12 11 16 16 C 1.38168 * 119.94277 * 180.25131 * 12 11 10 17 17 C 1.38241 * 120.05773 * 0.02562 * 16 12 11 18 18 C 1.38287 * 120.10676 * 359.97438 * 17 16 12 19 19 C 1.38116 * 120.06102 * 359.97438 * 18 17 16 20 20 C 1.53003 * 109.47005 * 205.00230 * 5 3 2 21 21 C 1.52998 * 109.46823 * 179.97438 * 20 5 3 22 22 C 1.52999 * 109.47177 * 60.00232 * 21 20 5 23 23 H 1.08998 * 109.47203 * 179.97438 * 22 21 20 24 24 C 1.53000 * 109.47094 * 59.99807 * 22 21 20 25 25 C 1.52995 * 109.47157 * 299.99819 * 22 21 20 26 26 C 1.52998 * 109.47258 * 59.99839 * 25 22 21 27 27 H 1.09004 * 109.47101 * 299.99291 * 1 2 3 28 28 H 1.08996 * 109.47386 * 59.99092 * 1 2 3 29 29 H 1.08994 * 109.47277 * 179.97438 * 1 2 3 30 30 H 0.97004 * 120.00646 * 239.99368 * 6 5 3 31 31 H 1.09004 * 109.47483 * 60.00099 * 9 7 6 32 32 H 1.08998 * 109.47353 * 300.00052 * 9 7 6 33 33 H 1.09007 * 109.46545 * 45.00480 * 13 12 11 34 34 H 0.96703 * 113.99880 * 299.99356 * 14 13 12 35 35 H 1.48504 * 110.00243 * 180.02562 * 15 13 12 36 36 H 1.48502 * 110.00316 * 301.32114 * 15 13 12 37 37 H 1.08004 * 119.96799 * 180.02562 * 16 12 11 38 38 H 1.07999 * 119.94448 * 180.02562 * 17 16 12 39 39 H 1.08002 * 119.96764 * 179.97438 * 18 17 16 40 40 H 1.08000 * 120.03192 * 180.02562 * 19 18 17 41 41 H 1.08999 * 109.47289 * 299.99863 * 20 5 3 42 42 H 1.09004 * 109.46946 * 60.00421 * 20 5 3 43 43 H 1.09004 * 109.47029 * 180.02562 * 21 20 5 44 44 H 1.09005 * 109.47466 * 299.99716 * 21 20 5 45 45 H 1.08999 * 109.47371 * 59.99995 * 24 22 21 46 46 H 1.08998 * 109.46863 * 180.02562 * 24 22 21 47 47 H 1.08998 * 109.47166 * 300.00109 * 24 22 21 48 48 H 1.08998 * 109.47306 * 180.02562 * 25 22 21 49 49 H 1.08999 * 109.47081 * 300.00013 * 25 22 21 50 50 H 1.08999 * 109.47137 * 180.02562 * 26 25 22 51 51 H 1.08999 * 109.46933 * 60.00083 * 26 25 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1135 0.1703 0.7912 7 6 3.8541 -1.1045 0.4390 8 8 3.1673 -1.3373 -0.5332 9 6 4.4173 -2.2407 1.2531 10 8 4.0058 -3.4849 0.6833 11 6 4.4310 -4.6176 1.3022 12 6 4.0642 -5.8598 0.8060 13 6 3.1979 -5.9551 -0.4236 14 8 1.8505 -5.6217 -0.0840 15 14 3.2581 -7.6927 -1.0926 16 6 4.4935 -7.0099 1.4400 17 6 5.2875 -6.9234 2.5683 18 6 5.6546 -5.6860 3.0649 19 6 5.2289 -4.5334 2.4342 20 6 4.0075 2.6069 0.6092 21 6 5.5354 2.6867 0.6092 22 6 6.0512 2.5879 -0.8278 23 1 7.1397 2.6452 -0.8279 24 6 5.4802 3.7415 -1.6550 25 6 5.6101 1.2559 -1.4376 26 6 4.0822 1.1761 -1.4376 27 1 -0.3633 0.5137 0.8901 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 4.6625 0.3564 1.5689 31 1 4.0506 -2.1707 2.2772 32 1 5.5058 -2.1836 1.2523 33 1 3.5641 -5.2613 -1.1805 34 1 1.4593 -6.1992 0.5859 35 1 2.4083 -7.7996 -2.3058 36 1 4.6586 -8.0628 -1.4199 37 1 4.2084 -7.9774 1.0537 38 1 5.6224 -7.8235 3.0622 39 1 6.2746 -5.6210 3.9468 40 1 5.5162 -3.5673 2.8222 41 1 3.6004 3.4287 0.0201 42 1 3.6404 2.6770 1.6332 43 1 5.8497 3.6355 1.0440 44 1 5.9422 1.8649 1.1986 45 1 5.7945 4.6905 -1.2206 46 1 5.8474 3.6708 -2.6789 47 1 4.3917 3.6846 -1.6550 48 1 5.9779 1.1853 -2.4612 49 1 6.0168 0.4341 -0.8483 50 1 3.7679 0.2269 -1.8716 51 1 3.6754 1.9978 -2.0269 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:51:50 Heat of formation + Delta-G solvation = -149.688180 kcal Electronic energy + Delta-G solvation = -35202.783033 eV Core-core repulsion = 30648.751681 eV Total energy + Delta-G solvation = -4554.031352 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.46387 -41.44459 -40.39312 -39.52486 -38.33910 -37.36049 -37.22752 -35.50262 -32.81636 -32.33536 -32.06839 -31.13247 -29.21352 -28.80045 -27.74499 -26.60532 -24.52378 -24.03162 -23.64168 -22.61740 -22.02244 -21.24449 -19.73853 -19.38235 -18.73196 -18.38775 -17.96492 -17.71512 -17.34977 -17.19894 -16.87107 -16.73223 -16.51922 -16.10549 -15.75233 -15.60672 -15.35968 -15.08760 -14.96040 -14.81848 -14.75716 -14.39707 -14.10119 -14.06010 -13.75617 -13.74570 -13.64248 -13.45202 -13.33815 -13.02081 -12.92473 -12.74221 -12.65205 -12.37494 -12.26303 -12.15725 -11.96625 -11.77715 -11.66751 -11.55710 -11.48417 -11.36684 -11.13926 -10.62748 -10.24223 -10.21844 -10.00956 -9.22047 -4.97015 0.19560 0.38802 1.08357 1.39150 1.50133 1.56682 1.72130 1.86177 2.07551 2.51017 2.66651 3.22210 3.48015 3.51681 3.59293 3.62348 3.76401 3.78063 3.85749 3.87329 3.91893 3.93700 4.01247 4.03953 4.14721 4.24693 4.30756 4.32043 4.34100 4.36980 4.41823 4.49342 4.50013 4.67007 4.67313 4.70335 4.78686 4.79266 4.87583 4.94777 4.96402 5.02315 5.03431 5.16009 5.22718 5.24064 5.28530 5.29877 5.41551 5.45779 5.55505 5.66768 6.20735 6.36269 6.77283 6.84185 7.15236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.321 6.321 3 C 0.455 3.545 4 O -0.507 6.507 5 C 0.203 3.797 6 N -0.721 5.721 7 C 0.513 3.487 8 O -0.469 6.469 9 C 0.042 3.958 10 O -0.276 6.276 11 C 0.152 3.848 12 C -0.150 4.150 13 C -0.055 4.055 14 O -0.531 6.531 15 Si 0.681 3.319 16 C -0.075 4.075 17 C -0.152 4.152 18 C -0.073 4.073 19 C -0.212 4.212 20 C -0.116 4.116 21 C -0.113 4.113 22 C -0.095 4.095 23 H 0.076 0.924 24 C -0.155 4.155 25 C -0.106 4.106 26 C -0.133 4.133 27 H 0.059 0.941 28 H 0.061 0.939 29 H 0.102 0.898 30 H 0.405 0.595 31 H 0.092 0.908 32 H 0.091 0.909 33 H 0.114 0.886 34 H 0.373 0.627 35 H -0.254 1.254 36 H -0.257 1.257 37 H 0.135 0.865 38 H 0.130 0.870 39 H 0.128 0.872 40 H 0.129 0.871 41 H 0.099 0.901 42 H 0.076 0.924 43 H 0.076 0.924 44 H 0.064 0.936 45 H 0.057 0.943 46 H 0.056 0.944 47 H 0.061 0.939 48 H 0.071 0.929 49 H 0.064 0.936 50 H 0.095 0.905 51 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.445 -1.546 5.795 7.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.235 6.235 3 C 0.296 3.704 4 O -0.394 6.394 5 C 0.115 3.885 6 N -0.379 5.379 7 C 0.297 3.703 8 O -0.339 6.339 9 C -0.037 4.037 10 O -0.187 6.187 11 C 0.106 3.894 12 C -0.151 4.151 13 C -0.166 4.166 14 O -0.335 6.335 15 Si 0.582 3.418 16 C -0.092 4.092 17 C -0.170 4.170 18 C -0.091 4.091 19 C -0.231 4.231 20 C -0.154 4.154 21 C -0.150 4.150 22 C -0.114 4.114 23 H 0.094 0.906 24 C -0.213 4.213 25 C -0.144 4.144 26 C -0.171 4.171 27 H 0.077 0.923 28 H 0.080 0.920 29 H 0.120 0.880 30 H 0.241 0.759 31 H 0.110 0.890 32 H 0.109 0.891 33 H 0.131 0.869 34 H 0.219 0.781 35 H -0.179 1.179 36 H -0.182 1.182 37 H 0.153 0.847 38 H 0.148 0.852 39 H 0.146 0.854 40 H 0.147 0.853 41 H 0.118 0.882 42 H 0.095 0.905 43 H 0.095 0.905 44 H 0.083 0.917 45 H 0.076 0.924 46 H 0.075 0.925 47 H 0.079 0.921 48 H 0.090 0.910 49 H 0.083 0.917 50 H 0.113 0.887 51 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 3.859 -1.483 3.739 5.574 hybrid contribution 0.452 0.910 0.740 1.257 sum 4.310 -0.573 4.479 6.242 Atomic orbital electron populations 1.23304 0.77007 1.03892 1.02077 1.86874 1.22676 1.31506 1.82466 1.24078 0.91809 0.82143 0.72373 1.90689 1.66664 1.36609 1.45471 1.20158 0.85333 0.88305 0.94728 1.45862 1.55380 1.04380 1.32317 1.19946 0.81249 0.83079 0.85984 1.90801 1.34024 1.83300 1.25782 1.22421 1.00445 0.83147 0.97705 1.86237 1.69965 1.11103 1.51437 1.18793 0.93153 0.86030 0.91417 1.19729 1.04046 0.90644 1.00646 1.24913 0.83232 1.11600 0.96877 1.86605 1.24587 1.59570 1.62774 0.95250 0.82233 0.79366 0.84928 1.20861 0.96709 0.96496 0.95183 1.21072 1.00460 0.98068 0.97406 1.21020 0.97501 0.91839 0.98745 1.21294 1.03779 1.00085 0.97961 1.21815 0.97152 0.94265 1.02166 1.21597 0.93707 1.02679 0.97055 1.21160 1.00394 0.95215 0.94610 0.90586 1.21977 1.01562 0.97778 0.99939 1.21486 0.94047 0.97220 1.01636 1.22028 0.97108 1.05122 0.92883 0.92265 0.92007 0.87963 0.75853 0.88973 0.89071 0.86896 0.78114 1.17907 1.18205 0.84735 0.85214 0.85379 0.85321 0.88247 0.90488 0.90530 0.91699 0.92422 0.92466 0.92057 0.91046 0.91706 0.88696 0.89958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.08 10.56 101.05 1.07 1.15 16 2 O -0.32 -1.53 6.72 -47.36 -0.32 -1.85 16 3 C 0.45 1.82 6.71 36.00 0.24 2.06 16 4 O -0.51 -3.07 15.84 -18.76 -0.30 -3.37 16 5 C 0.20 0.11 0.63 -132.97 -0.08 0.03 16 6 N -0.72 0.92 4.03 -48.68 -0.20 0.72 16 7 C 0.51 0.65 6.84 -10.99 -0.08 0.58 16 8 O -0.47 -2.60 11.75 -25.78 -0.30 -2.90 16 9 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 10 O -0.28 -0.83 9.00 -39.34 -0.35 -1.18 16 11 C 0.15 0.28 6.66 -39.22 -0.26 0.02 16 12 C -0.15 -0.22 5.27 -104.48 -0.55 -0.77 16 13 C -0.06 -0.11 2.38 36.01 0.09 -0.03 16 14 O -0.53 -1.45 12.88 -35.23 -0.45 -1.90 16 15 Si 0.68 0.12 29.92 -169.99 -5.09 -4.97 16 16 C -0.08 0.04 8.66 -39.61 -0.34 -0.30 16 17 C -0.15 0.16 10.04 -39.56 -0.40 -0.24 16 18 C -0.07 0.08 10.04 -39.61 -0.40 -0.32 16 19 C -0.21 0.08 9.04 -39.44 -0.36 -0.28 16 20 C -0.12 0.13 4.04 -26.73 -0.11 0.03 16 21 C -0.11 0.33 5.28 -26.73 -0.14 0.19 16 22 C -0.10 0.20 3.19 -90.62 -0.29 -0.09 16 23 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 24 C -0.16 0.21 8.50 37.16 0.32 0.53 16 25 C -0.11 0.11 5.29 -26.73 -0.14 -0.04 16 26 C -0.13 -0.12 4.23 -26.73 -0.11 -0.23 16 27 H 0.06 0.12 8.13 -51.93 -0.42 -0.30 16 28 H 0.06 0.17 8.13 -51.93 -0.42 -0.25 16 29 H 0.10 0.14 8.14 -51.93 -0.42 -0.28 16 30 H 0.41 -1.82 7.32 -40.82 -0.30 -2.11 16 31 H 0.09 -0.27 7.67 -51.93 -0.40 -0.66 16 32 H 0.09 -0.31 7.66 -51.93 -0.40 -0.71 16 33 H 0.11 0.45 7.83 -51.93 -0.41 0.05 16 34 H 0.37 -0.63 8.70 45.56 0.40 -0.24 16 35 H -0.25 -0.91 7.11 56.52 0.40 -0.51 16 36 H -0.26 -0.62 7.11 56.52 0.40 -0.21 16 37 H 0.14 -0.39 5.13 -52.48 -0.27 -0.66 16 38 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 39 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 40 H 0.13 -0.36 6.30 -52.49 -0.33 -0.69 16 41 H 0.10 0.00 6.16 -51.93 -0.32 -0.32 16 42 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 44 H 0.06 -0.28 6.86 -51.93 -0.36 -0.63 16 45 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 46 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 47 H 0.06 -0.04 4.81 -51.93 -0.25 -0.29 16 48 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 49 H 0.06 -0.08 7.60 -51.93 -0.39 -0.47 16 50 H 0.09 0.32 6.17 -51.93 -0.32 0.00 16 51 H 0.08 0.09 6.43 -51.93 -0.33 -0.24 16 LS Contribution 394.94 15.07 5.95 5.95 Total: 0.00 -10.60 394.94 -9.94 -20.54 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -7.53 Total: -13.49 kcal Atomic # 6 Polarization: 3.80 SS G_CDS: -1.36 Total: 2.44 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: -0.20 Total: 0.72 kcal Atomic # 8 Polarization: -9.48 SS G_CDS: -1.73 Total: -11.21 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: -5.09 Total: -4.97 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -10.60 -9.94 -20.54 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.145 kcal (2) G-P(sol) polarization free energy of solvation -10.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.543 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds