Wall clock time and date at job start Sat Mar 6 2021 20:52:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34225 * 117.00279 * 2 1 4 4 O 1.20831 * 119.99653 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00372 * 179.97438 * 3 2 1 6 6 N 1.46497 * 109.47081 * 325.00273 * 5 3 2 7 7 C 1.34779 * 120.00488 * 59.99615 * 6 5 3 8 8 O 1.21288 * 119.99575 * 359.97438 * 7 6 5 9 9 C 1.50699 * 120.00378 * 180.02562 * 7 6 5 10 10 C 1.52997 * 109.47078 * 179.97438 * 9 7 6 11 11 O 1.42897 * 109.47255 * 180.02562 * 10 9 7 12 12 C 1.35902 * 117.00506 * 180.02562 * 11 10 9 13 13 C 1.38710 * 120.05704 * 179.72361 * 12 11 10 14 14 C 1.38168 * 119.94287 * 179.71749 * 13 12 11 15 15 C 1.50698 * 119.97631 * 180.27646 * 14 13 12 16 16 O 1.42905 * 109.47015 * 300.30468 * 15 14 13 17 17 Si 1.86298 * 109.47407 * 180.30434 * 15 14 13 18 18 C 1.38249 * 120.05394 * 0.57774 * 14 13 12 19 19 C 1.38291 * 120.10774 * 359.67937 * 18 14 13 20 20 C 1.38121 * 120.06137 * 0.04352 * 19 18 14 21 21 C 1.52997 * 109.47466 * 205.00006 * 5 3 2 22 22 C 1.53000 * 109.47060 * 180.02562 * 21 5 3 23 23 C 1.52996 * 109.47328 * 60.00126 * 22 21 5 24 24 H 1.09004 * 109.47108 * 179.97438 * 23 22 21 25 25 C 1.52993 * 109.47473 * 60.00001 * 23 22 21 26 26 C 1.53002 * 109.46891 * 299.99597 * 23 22 21 27 27 C 1.52997 * 109.46978 * 60.00410 * 26 23 22 28 28 H 1.09005 * 109.47304 * 60.00280 * 1 2 3 29 29 H 1.09000 * 109.47350 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47605 * 300.00203 * 1 2 3 31 31 H 0.97003 * 119.99956 * 240.00404 * 6 5 3 32 32 H 1.08993 * 109.47512 * 300.00202 * 9 7 6 33 33 H 1.09002 * 109.46959 * 59.99990 * 9 7 6 34 34 H 1.09004 * 109.47261 * 300.00035 * 10 9 7 35 35 H 1.09002 * 109.47153 * 60.00207 * 10 9 7 36 36 H 1.08000 * 120.02853 * 0.02562 * 13 12 11 37 37 H 1.09006 * 109.46657 * 60.30043 * 15 14 13 38 38 H 0.96694 * 113.99866 * 299.99676 * 16 15 14 39 39 H 1.48491 * 109.99999 * 58.67990 * 17 15 14 40 40 H 1.48501 * 110.00085 * 180.02562 * 17 15 14 41 41 H 1.07994 * 119.94595 * 179.69519 * 18 14 13 42 42 H 1.08010 * 119.96643 * 180.02562 * 19 18 14 43 43 H 1.07993 * 120.03061 * 180.02562 * 20 19 18 44 44 H 1.09002 * 109.47153 * 59.99773 * 21 5 3 45 45 H 1.09001 * 109.46832 * 299.99964 * 21 5 3 46 46 H 1.09004 * 109.46724 * 180.02562 * 22 21 5 47 47 H 1.09001 * 109.47194 * 299.99650 * 22 21 5 48 48 H 1.09004 * 109.46998 * 59.99561 * 25 23 22 49 49 H 1.09002 * 109.47722 * 180.02562 * 25 23 22 50 50 H 1.09004 * 109.46862 * 300.00038 * 25 23 22 51 51 H 1.09002 * 109.47097 * 180.02562 * 26 23 22 52 52 H 1.09001 * 109.47142 * 300.00176 * 26 23 22 53 53 H 1.09001 * 109.47375 * 59.99908 * 27 26 23 54 54 H 1.09000 * 109.47140 * 179.97438 * 27 26 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1128 0.1706 0.7932 7 6 3.8538 -1.1044 0.4414 8 8 3.1677 -1.3376 -0.5312 9 6 4.4155 -2.2402 1.2571 10 6 3.9744 -3.5725 0.6479 11 8 4.5066 -4.6495 1.4216 12 6 4.2071 -5.9103 1.0123 13 6 4.6954 -7.0029 1.7136 14 6 4.3847 -8.2837 1.2987 15 6 4.9097 -9.4712 2.0638 16 8 6.3384 -9.4408 2.0688 17 14 4.3247 -11.0419 1.2506 18 6 3.5977 -8.4768 0.1787 19 6 3.1141 -7.3892 -0.5253 20 6 3.4171 -6.1068 -0.1114 21 6 4.0070 2.6071 0.6101 22 6 5.5349 2.6874 0.6101 23 6 6.0508 2.5886 -0.8269 24 1 7.1393 2.6462 -0.8269 25 6 5.4796 3.7417 -1.6544 26 6 5.6101 1.2561 -1.4364 27 6 4.0823 1.1759 -1.4364 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 4.6612 0.3572 1.5713 32 1 5.5040 -2.1833 1.2580 33 1 4.0472 -2.1694 2.2805 34 1 2.8859 -3.6292 0.6474 35 1 4.3424 -3.6435 -0.3757 36 1 5.3139 -6.8526 2.5862 37 1 4.5419 -9.4341 3.0893 38 1 6.7355 -9.4709 1.1876 39 1 4.7928 -11.0894 -0.1578 40 1 4.8353 -12.2204 1.9961 41 1 3.3600 -9.4787 -0.1469 42 1 2.4991 -7.5427 -1.3998 43 1 3.0389 -5.2578 -0.6612 44 1 3.6390 2.6778 1.6337 45 1 3.6003 3.4287 0.0203 46 1 5.8488 3.6365 1.0447 47 1 5.9419 1.8659 1.1996 48 1 5.7935 4.6909 -1.2201 49 1 5.8467 3.6710 -2.6783 50 1 4.3910 3.6845 -1.6544 51 1 5.9781 1.1855 -2.4600 52 1 6.0172 0.4346 -0.8468 53 1 3.6752 1.9974 -2.0260 54 1 3.7683 0.2268 -1.8711 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_4549614.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:52:01 Heat of formation + Delta-G solvation = -157.870248 kcal Electronic energy + Delta-G solvation = -36067.155315 eV Core-core repulsion = 31357.231543 eV Total energy + Delta-G solvation = -4709.923772 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.197 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -42.53692 -41.30523 -40.62396 -39.59714 -39.03686 -37.53251 -37.36728 -35.50450 -33.49843 -32.46735 -31.98773 -31.76072 -30.60125 -29.07524 -27.76805 -27.02520 -25.51105 -24.39759 -23.90329 -23.65708 -22.33863 -21.68127 -21.23174 -19.57385 -19.38104 -18.82776 -18.37666 -17.98443 -17.64600 -17.41052 -17.32305 -17.12312 -16.94701 -16.66523 -16.26031 -16.10566 -15.62482 -15.45846 -15.33722 -15.08208 -14.87728 -14.68819 -14.54679 -14.39098 -14.12051 -14.01831 -13.92551 -13.77553 -13.61722 -13.31461 -13.19242 -13.06107 -12.90693 -12.83510 -12.70903 -12.62216 -12.37200 -12.10365 -11.98427 -11.85123 -11.83356 -11.76168 -11.56485 -11.39795 -11.24896 -11.14459 -10.74015 -10.66746 -10.22448 -9.92038 -9.25281 -4.89710 0.21274 0.40894 0.91990 1.30594 1.51806 1.62893 1.69901 1.79005 1.97067 2.43979 2.67614 3.27767 3.41703 3.52135 3.61091 3.63097 3.66324 3.86123 3.92900 3.94755 3.99054 4.07116 4.07439 4.12864 4.17521 4.21239 4.24721 4.25823 4.31904 4.40375 4.42612 4.49124 4.56731 4.57055 4.60043 4.65470 4.73208 4.79054 4.81128 4.84408 4.87112 4.99675 5.02538 5.06824 5.10100 5.19392 5.27543 5.28602 5.29650 5.35018 5.38985 5.39519 5.45399 5.53776 5.72136 6.35759 6.44931 6.47931 6.58496 7.20669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.330 6.330 3 C 0.450 3.550 4 O -0.537 6.537 5 C 0.204 3.796 6 N -0.708 5.708 7 C 0.520 3.480 8 O -0.534 6.534 9 C -0.131 4.131 10 C 0.076 3.924 11 O -0.325 6.325 12 C 0.119 3.881 13 C -0.142 4.142 14 C -0.082 4.082 15 C -0.086 4.086 16 O -0.548 6.548 17 Si 0.774 3.226 18 C -0.158 4.158 19 C -0.076 4.076 20 C -0.209 4.209 21 C -0.113 4.113 22 C -0.108 4.108 23 C -0.093 4.093 24 H 0.086 0.914 25 C -0.156 4.156 26 C -0.101 4.101 27 C -0.127 4.127 28 H 0.055 0.945 29 H 0.119 0.881 30 H 0.060 0.940 31 H 0.422 0.578 32 H 0.126 0.874 33 H 0.121 0.879 34 H 0.066 0.934 35 H 0.067 0.933 36 H 0.127 0.873 37 H 0.125 0.875 38 H 0.386 0.614 39 H -0.282 1.282 40 H -0.303 1.303 41 H 0.147 0.853 42 H 0.152 0.848 43 H 0.138 0.862 44 H 0.081 0.919 45 H 0.083 0.917 46 H 0.084 0.916 47 H 0.085 0.915 48 H 0.060 0.940 49 H 0.053 0.947 50 H 0.049 0.951 51 H 0.068 0.932 52 H 0.073 0.927 53 H 0.071 0.929 54 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.314 0.500 1.051 1.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.245 6.245 3 C 0.293 3.707 4 O -0.426 6.426 5 C 0.115 3.885 6 N -0.365 5.365 7 C 0.307 3.693 8 O -0.410 6.410 9 C -0.170 4.170 10 C 0.001 3.999 11 O -0.239 6.239 12 C 0.074 3.926 13 C -0.161 4.161 14 C -0.083 4.083 15 C -0.194 4.194 16 O -0.356 6.356 17 Si 0.679 3.321 18 C -0.175 4.175 19 C -0.094 4.094 20 C -0.228 4.228 21 C -0.151 4.151 22 C -0.145 4.145 23 C -0.111 4.111 24 H 0.104 0.896 25 C -0.213 4.213 26 C -0.139 4.139 27 C -0.166 4.166 28 H 0.074 0.926 29 H 0.138 0.862 30 H 0.079 0.921 31 H 0.261 0.739 32 H 0.144 0.856 33 H 0.139 0.861 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.145 0.855 37 H 0.143 0.857 38 H 0.235 0.765 39 H -0.208 1.208 40 H -0.231 1.231 41 H 0.164 0.836 42 H 0.169 0.831 43 H 0.156 0.844 44 H 0.099 0.901 45 H 0.102 0.898 46 H 0.103 0.897 47 H 0.103 0.897 48 H 0.079 0.921 49 H 0.072 0.928 50 H 0.068 0.932 51 H 0.087 0.913 52 H 0.091 0.909 53 H 0.090 0.910 54 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.826 -0.019 0.766 1.127 hybrid contribution 0.592 0.841 -0.342 1.084 sum 1.418 0.822 0.424 1.693 Atomic orbital electron populations 1.23443 0.76564 1.04920 1.01999 1.86865 1.23336 1.31870 1.82380 1.24811 0.93098 0.81556 0.71234 1.90668 1.67623 1.37443 1.46907 1.20146 0.83313 0.89884 0.95154 1.45879 1.54552 1.03899 1.32156 1.20540 0.79683 0.84003 0.85036 1.90747 1.37482 1.84298 1.28430 1.21398 1.04825 0.89477 1.01310 1.22428 0.98796 0.84106 0.94563 1.85951 1.71599 1.12483 1.53904 1.19121 0.95279 0.84334 0.93916 1.20316 1.03690 0.90058 1.02035 1.20157 0.97753 0.94306 0.96041 1.25334 0.83257 1.04153 1.06696 1.86570 1.18406 1.95760 1.34877 0.93912 0.90426 0.72155 0.75584 1.21164 1.00360 0.99940 0.96060 1.21243 0.97600 0.91098 0.99441 1.21547 1.03220 0.99615 0.98396 1.21797 0.98478 0.92885 1.01891 1.21605 0.92115 1.04023 0.96798 1.21156 1.00898 0.94186 0.94867 0.89576 1.21979 1.00856 0.98451 1.00041 1.21463 0.92500 0.98105 1.01797 1.21936 0.98395 1.03467 0.92753 0.92585 0.86245 0.92083 0.73859 0.85556 0.86087 0.91556 0.91517 0.85501 0.85688 0.76456 1.20808 1.23125 0.83576 0.83051 0.84432 0.90067 0.89801 0.89708 0.89696 0.92074 0.92800 0.93180 0.91325 0.90859 0.91047 0.90723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.08 10.56 113.37 1.20 1.28 16 2 O -0.33 -2.41 6.72 -43.61 -0.29 -2.70 16 3 C 0.45 3.26 6.71 71.23 0.48 3.74 16 4 O -0.54 -6.65 15.84 21.95 0.35 -6.30 16 5 C 0.20 0.00 0.63 2.86 0.00 0.01 16 6 N -0.71 3.33 4.03 -426.32 -1.72 1.61 16 7 C 0.52 -0.71 6.76 87.66 0.59 -0.12 16 8 O -0.53 -3.10 11.23 20.38 0.23 -2.87 16 9 C -0.13 0.72 6.07 29.85 0.18 0.90 16 10 C 0.08 -0.03 4.03 71.98 0.29 0.26 16 11 O -0.33 -1.09 10.14 -92.45 -0.94 -2.03 16 12 C 0.12 0.51 6.69 22.51 0.15 0.66 16 13 C -0.14 -0.61 9.55 22.37 0.21 -0.40 16 14 C -0.08 -0.12 5.39 -19.88 -0.11 -0.23 16 15 C -0.09 -0.02 2.82 71.24 0.20 0.18 16 16 O -0.55 -1.86 12.76 -148.98 -1.90 -3.76 16 17 Si 0.77 -1.50 29.79 68.60 2.04 0.54 16 18 C -0.16 0.10 8.67 22.28 0.19 0.30 16 19 C -0.08 0.03 10.04 22.25 0.22 0.26 16 20 C -0.21 -0.42 9.04 22.37 0.20 -0.22 16 21 C -0.11 0.34 4.04 30.59 0.12 0.47 16 22 C -0.11 0.82 5.28 30.59 0.16 0.98 16 23 C -0.09 0.51 3.19 -10.80 -0.03 0.48 16 24 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 25 C -0.16 0.49 8.50 71.98 0.61 1.10 16 26 C -0.10 0.36 5.29 30.59 0.16 0.52 16 27 C -0.13 -0.12 4.23 30.60 0.13 0.01 16 28 H 0.06 0.25 8.13 -2.38 -0.02 0.23 16 29 H 0.12 -0.13 8.14 -2.39 -0.02 -0.15 16 30 H 0.06 0.18 8.13 -2.39 -0.02 0.16 16 31 H 0.42 -4.61 7.32 -92.71 -0.68 -5.29 16 32 H 0.13 -1.17 8.14 -2.39 -0.02 -1.19 16 33 H 0.12 -0.99 8.14 -2.39 -0.02 -1.00 16 34 H 0.07 0.06 7.62 -2.38 -0.02 0.04 16 35 H 0.07 0.04 7.62 -2.39 -0.02 0.02 16 36 H 0.13 0.61 8.06 -2.91 -0.02 0.59 16 37 H 0.13 -0.16 7.96 -2.38 -0.02 -0.17 16 38 H 0.39 -0.85 8.70 -74.06 -0.64 -1.49 16 39 H -0.28 -0.47 7.11 99.48 0.71 0.24 16 40 H -0.30 -1.74 7.11 99.48 0.71 -1.03 16 41 H 0.15 -0.73 4.87 -2.91 -0.01 -0.74 16 42 H 0.15 -0.79 8.06 -2.91 -0.02 -0.82 16 43 H 0.14 0.04 6.30 -2.91 -0.02 0.02 16 44 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 45 H 0.08 0.03 6.16 -2.39 -0.01 0.01 16 46 H 0.08 -0.71 8.14 -2.39 -0.02 -0.73 16 47 H 0.08 -0.94 6.86 -2.39 -0.02 -0.96 16 48 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 49 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 50 H 0.05 -0.04 4.81 -2.38 -0.01 -0.05 16 51 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 52 H 0.07 -0.35 7.61 -2.39 -0.02 -0.37 16 53 H 0.07 0.18 6.43 -2.39 -0.02 0.17 16 54 H 0.07 0.40 6.17 -2.39 -0.01 0.39 16 Total: 0.00 -21.42 416.30 2.39 -19.02 By element: Atomic # 1 Polarization: -13.33 SS G_CDS: -0.35 Total: -13.68 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 4.97 Total: 10.17 kcal Atomic # 7 Polarization: 3.33 SS G_CDS: -1.72 Total: 1.61 kcal Atomic # 8 Polarization: -15.12 SS G_CDS: -2.55 Total: -17.67 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: 2.04 Total: 0.54 kcal Total: -21.42 2.39 -19.02 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_4549614.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.846 kcal (2) G-P(sol) polarization free energy of solvation -21.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.025 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds