Wall clock time and date at job start Sat Mar 6 2021 20:52:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34229 * 117.00052 * 2 1 4 4 O 1.20822 * 120.00124 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00104 * 180.02562 * 3 2 1 6 6 N 1.46496 * 109.47101 * 34.99963 * 5 3 2 7 7 C 1.34777 * 120.00258 * 300.00499 * 6 5 3 8 8 O 1.21279 * 120.00166 * 359.97438 * 7 6 5 9 9 C 1.50706 * 119.99762 * 179.97438 * 7 6 5 10 10 F 1.39897 * 109.47068 * 299.99527 * 9 7 6 11 11 F 1.39895 * 109.47042 * 59.99836 * 9 7 6 12 12 O 1.42906 * 109.46702 * 179.97438 * 9 7 6 13 13 C 1.35903 * 116.99522 * 179.97438 * 12 9 7 14 14 C 1.38725 * 120.05861 * 359.72783 * 13 12 9 15 15 C 1.38145 * 119.94387 * 179.74053 * 14 13 12 16 16 C 1.38270 * 120.05488 * 0.51442 * 15 14 13 17 17 C 1.50696 * 119.94227 * 179.74316 * 16 15 14 18 18 O 1.42902 * 109.47181 * 120.02040 * 17 16 15 19 19 Si 1.86292 * 109.47482 * 0.02562 * 17 16 15 20 20 C 1.38269 * 120.11023 * 359.75936 * 16 15 14 21 21 C 1.38139 * 120.05370 * 359.97438 * 20 16 15 22 22 C 1.52997 * 109.47084 * 275.00464 * 5 3 2 23 23 C 1.52997 * 109.47232 * 179.97438 * 22 5 3 24 24 C 1.53002 * 109.47143 * 59.99957 * 23 22 5 25 25 H 1.09000 * 109.47312 * 180.02562 * 24 23 22 26 26 C 1.52996 * 109.46969 * 60.00070 * 24 23 22 27 27 C 1.52997 * 109.47092 * 300.00129 * 24 23 22 28 28 C 1.52993 * 109.47230 * 155.00542 * 5 3 2 29 29 H 1.08996 * 109.47136 * 59.99303 * 1 2 3 30 30 H 1.09001 * 109.46796 * 179.97438 * 1 2 3 31 31 H 1.09007 * 109.46953 * 299.99332 * 1 2 3 32 32 H 0.96999 * 119.99694 * 119.99889 * 6 5 3 33 33 H 1.08000 * 120.02603 * 359.97438 * 14 13 12 34 34 H 1.08002 * 119.97017 * 180.23008 * 15 14 13 35 35 H 1.09005 * 109.47273 * 240.01690 * 17 16 15 36 36 H 0.96702 * 113.99741 * 300.00264 * 18 17 16 37 37 H 1.48506 * 110.00394 * 180.02562 * 19 17 16 38 38 H 1.48513 * 109.99880 * 301.31916 * 19 17 16 39 39 H 1.07997 * 119.96991 * 179.97438 * 20 16 15 40 40 H 1.08006 * 120.02293 * 179.97438 * 21 20 16 41 41 H 1.09002 * 109.47045 * 299.99967 * 22 5 3 42 42 H 1.08998 * 109.47624 * 59.99590 * 22 5 3 43 43 H 1.09002 * 109.47153 * 299.99992 * 23 22 5 44 44 H 1.09004 * 109.47261 * 179.97438 * 23 22 5 45 45 H 1.09004 * 109.47552 * 300.00092 * 26 24 23 46 46 H 1.09000 * 109.47380 * 60.00701 * 26 24 23 47 47 H 1.09001 * 109.46997 * 180.02562 * 26 24 23 48 48 H 1.09002 * 109.47045 * 299.99867 * 27 24 23 49 49 H 1.09001 * 109.47375 * 179.97438 * 27 24 23 50 50 H 1.09004 * 109.46862 * 299.99896 * 28 5 3 51 51 H 1.09002 * 109.47722 * 59.99845 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1129 0.1707 -0.7932 7 6 3.8538 -1.1042 -0.4415 8 8 3.1685 -1.3375 0.5316 9 6 4.4156 -2.2400 -1.2573 10 9 3.9428 -2.1491 -2.5708 11 9 5.8126 -2.1669 -1.2584 12 8 4.0046 -3.4845 -0.6876 13 6 4.4286 -4.6169 -1.3080 14 6 5.2192 -4.5320 -2.4447 15 6 5.6534 -5.6847 -3.0703 16 6 5.2918 -6.9221 -2.5705 17 6 5.7621 -8.1778 -3.2583 18 8 6.5415 -8.9562 -2.3480 19 14 6.8023 -7.7243 -4.7357 20 6 4.4992 -7.0093 -1.4409 21 6 4.0670 -5.8597 -0.8086 22 6 4.0828 1.1756 1.4362 23 6 5.6107 1.2551 1.4356 24 6 6.0519 2.5872 0.8259 25 1 7.1404 2.6436 0.8250 26 6 5.4816 3.7406 1.6537 27 6 5.5354 2.6865 -0.6108 28 6 4.0070 2.6072 -0.6100 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8901 32 1 4.6612 0.3573 -1.5713 33 1 5.4981 -3.5657 -2.8381 34 1 6.2720 -5.6191 -3.9532 35 1 4.8991 -8.7578 -3.5856 36 1 7.3275 -8.5017 -2.0149 37 1 7.2718 -8.9541 -5.4232 38 1 6.0129 -6.8878 -5.6752 39 1 4.2178 -7.9770 -1.0527 40 1 3.4476 -5.9284 0.0735 41 1 3.6761 1.9971 2.0260 42 1 3.7689 0.2264 1.8704 43 1 6.0170 0.4333 0.8458 44 1 5.9786 1.1848 2.4592 45 1 4.3930 3.6841 1.6542 46 1 5.8496 3.6700 2.6773 47 1 5.7955 4.6897 1.2191 48 1 5.9418 1.8647 -1.2006 49 1 5.8494 3.6357 -1.0451 50 1 3.6390 2.6779 -1.6336 51 1 3.6003 3.4288 -0.0202 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11976204_4549640.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:52:38 Heat of formation + Delta-G solvation = -244.046443 kcal Electronic energy + Delta-G solvation = -40913.695330 eV Core-core repulsion = 35416.664346 eV Total energy + Delta-G solvation = -5497.030984 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.162 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -50.80683 -48.78235 -42.66945 -41.30771 -40.67617 -39.77198 -39.12106 -37.42134 -37.24554 -35.87465 -32.58912 -32.32326 -32.18497 -31.90047 -29.17174 -28.70817 -27.84320 -26.29089 -24.76870 -24.37009 -24.11895 -22.95344 -22.43182 -21.54085 -20.56637 -20.16415 -19.60592 -19.50780 -18.82816 -18.57271 -17.98065 -17.52272 -17.38485 -17.05681 -16.92566 -16.69585 -16.28788 -16.25301 -15.85012 -15.75073 -15.70389 -15.40827 -15.29431 -15.21424 -15.09044 -15.02283 -14.93931 -14.54120 -14.38524 -14.30000 -14.18176 -14.14758 -13.89183 -13.76559 -13.58079 -13.46199 -13.07649 -12.97177 -12.85068 -12.77630 -12.35201 -12.32680 -12.11785 -11.93886 -11.81625 -11.73226 -11.61512 -11.49396 -11.34057 -11.12855 -10.58031 -10.49508 -10.15816 -9.51486 -5.08198 0.07666 0.18735 0.41911 0.76509 1.10047 1.24948 1.58535 1.61551 1.78135 1.93422 2.01865 2.50181 2.68201 3.14396 3.29706 3.37562 3.40882 3.49878 3.54395 3.65969 3.74858 3.77825 3.79239 3.89800 4.04117 4.10689 4.20251 4.21324 4.21916 4.23381 4.29491 4.38666 4.40959 4.50497 4.53142 4.61224 4.65739 4.71000 4.76783 4.80801 4.82395 4.87797 4.93756 4.94598 5.05342 5.08171 5.12892 5.16977 5.32848 5.37116 5.39243 5.41320 5.74197 5.89100 6.41413 6.53321 6.66037 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.330 6.330 3 C 0.456 3.544 4 O -0.498 6.498 5 C 0.200 3.800 6 N -0.699 5.699 7 C 0.515 3.485 8 O -0.430 6.430 9 C 0.433 3.567 10 F -0.175 7.175 11 F -0.175 7.175 12 O -0.284 6.284 13 C 0.108 3.892 14 C -0.187 4.187 15 C -0.078 4.078 16 C -0.143 4.143 17 C -0.065 4.065 18 O -0.540 6.540 19 Si 0.686 3.314 20 C -0.056 4.056 21 C -0.126 4.126 22 C -0.135 4.135 23 C -0.110 4.110 24 C -0.096 4.096 25 H 0.079 0.921 26 C -0.156 4.156 27 C -0.116 4.116 28 C -0.117 4.117 29 H 0.061 0.939 30 H 0.103 0.897 31 H 0.064 0.936 32 H 0.414 0.586 33 H 0.136 0.864 34 H 0.134 0.866 35 H 0.115 0.885 36 H 0.380 0.620 37 H -0.253 1.253 38 H -0.257 1.257 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.089 0.911 42 H 0.095 0.905 43 H 0.066 0.934 44 H 0.075 0.925 45 H 0.060 0.940 46 H 0.057 0.943 47 H 0.058 0.942 48 H 0.065 0.935 49 H 0.080 0.920 50 H 0.080 0.920 51 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.316 2.537 -0.699 5.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.244 6.244 3 C 0.296 3.704 4 O -0.384 6.384 5 C 0.113 3.887 6 N -0.357 5.357 7 C 0.293 3.707 8 O -0.297 6.297 9 C 0.356 3.644 10 F -0.157 7.157 11 F -0.156 7.156 12 O -0.201 6.201 13 C 0.064 3.936 14 C -0.205 4.205 15 C -0.095 4.095 16 C -0.143 4.143 17 C -0.176 4.176 18 O -0.345 6.345 19 Si 0.588 3.412 20 C -0.074 4.074 21 C -0.145 4.145 22 C -0.173 4.173 23 C -0.147 4.147 24 C -0.114 4.114 25 H 0.097 0.903 26 C -0.213 4.213 27 C -0.153 4.153 28 C -0.155 4.155 29 H 0.080 0.920 30 H 0.121 0.879 31 H 0.083 0.917 32 H 0.251 0.749 33 H 0.154 0.846 34 H 0.151 0.849 35 H 0.133 0.867 36 H 0.227 0.773 37 H -0.178 1.178 38 H -0.182 1.182 39 H 0.157 0.843 40 H 0.158 0.842 41 H 0.107 0.893 42 H 0.113 0.887 43 H 0.084 0.916 44 H 0.094 0.906 45 H 0.079 0.921 46 H 0.076 0.924 47 H 0.077 0.923 48 H 0.084 0.916 49 H 0.098 0.902 50 H 0.099 0.901 51 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 3.067 2.171 -0.822 3.846 hybrid contribution -0.446 0.081 -0.574 0.731 sum 2.621 2.251 -1.396 3.726 Atomic orbital electron populations 1.23341 0.76452 1.04025 1.02433 1.86801 1.23209 1.31723 1.82701 1.23915 0.91518 0.82258 0.72698 1.90707 1.66379 1.36422 1.44918 1.20401 0.85550 0.87827 0.94877 1.45810 1.54136 1.03592 1.32194 1.19251 0.82613 0.82845 0.86037 1.90871 1.32558 1.82274 1.23986 1.21822 0.75970 0.88140 0.78513 1.93192 1.87991 1.96189 1.38299 1.93189 1.30004 1.96308 1.96114 1.86672 1.70424 1.11130 1.51844 1.18975 0.96183 0.85420 0.92979 1.21468 1.01823 1.00548 0.96680 1.20805 0.98474 0.91300 0.98959 1.20370 1.00950 0.94923 0.98068 1.25004 0.99733 0.92113 1.00721 1.86508 1.41023 1.42740 1.64223 0.94767 0.86905 0.82381 0.77129 1.20888 0.94679 0.98055 0.93778 1.20533 1.03063 0.88653 1.02212 1.22078 0.97518 1.05411 0.92321 1.21536 0.93664 0.97491 1.02052 1.21166 1.00665 0.95099 0.94474 0.90295 1.21979 1.01464 0.97806 1.00009 1.21641 0.93425 1.03003 0.97238 1.21872 0.97465 0.93687 1.02451 0.91987 0.87901 0.91704 0.74886 0.84645 0.84898 0.86727 0.77292 1.17813 1.18235 0.84253 0.84153 0.89253 0.88692 0.91563 0.90599 0.92108 0.92352 0.92330 0.91621 0.90168 0.90135 0.87718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.03 10.56 101.05 1.07 1.10 16 2 O -0.33 -1.04 6.73 -47.36 -0.32 -1.36 16 3 C 0.46 1.19 6.71 36.01 0.24 1.43 16 4 O -0.50 -2.28 15.84 -18.75 -0.30 -2.58 16 5 C 0.20 -0.08 0.63 -132.98 -0.08 -0.16 16 6 N -0.70 0.83 4.03 -48.69 -0.20 0.63 16 7 C 0.52 0.65 6.28 -10.98 -0.07 0.58 16 8 O -0.43 -1.63 11.75 -25.77 -0.30 -1.93 16 9 C 0.43 0.53 2.05 36.01 0.07 0.60 16 10 F -0.18 -0.18 15.27 2.25 0.03 -0.14 16 11 F -0.17 -0.03 15.31 2.25 0.03 0.00 16 12 O -0.28 -0.84 9.60 -39.34 -0.38 -1.22 16 13 C 0.11 0.24 6.48 -39.22 -0.25 -0.02 16 14 C -0.19 -0.21 8.26 -39.44 -0.33 -0.53 16 15 C -0.08 0.00 8.66 -39.60 -0.34 -0.34 16 16 C -0.14 -0.01 5.39 -104.60 -0.56 -0.57 16 17 C -0.06 0.03 2.82 36.00 0.10 0.14 16 18 O -0.54 0.09 12.77 -35.23 -0.45 -0.36 16 19 Si 0.69 -0.87 29.78 -169.99 -5.06 -5.93 16 20 C -0.06 -0.02 9.60 -39.61 -0.38 -0.40 16 21 C -0.13 -0.15 9.99 -39.43 -0.39 -0.55 16 22 C -0.14 0.07 4.23 -26.73 -0.11 -0.04 16 23 C -0.11 0.22 5.29 -26.73 -0.14 0.08 16 24 C -0.10 0.28 3.19 -90.62 -0.29 -0.01 16 25 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 26 C -0.16 0.37 8.50 37.16 0.32 0.69 16 27 C -0.12 0.41 5.28 -26.71 -0.14 0.27 16 28 C -0.12 0.24 4.04 -26.71 -0.11 0.14 16 29 H 0.06 0.04 8.13 -51.93 -0.42 -0.38 16 30 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 32 H 0.41 -1.50 7.32 -40.82 -0.30 -1.80 16 33 H 0.14 0.04 5.10 -52.49 -0.27 -0.23 16 34 H 0.13 -0.27 4.87 -52.49 -0.26 -0.53 16 35 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 36 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 37 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 38 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 39 H 0.14 -0.10 8.06 -52.49 -0.42 -0.52 16 40 H 0.14 0.01 8.06 -52.48 -0.42 -0.41 16 41 H 0.09 -0.06 6.43 -51.93 -0.33 -0.39 16 42 H 0.09 0.12 6.17 -51.93 -0.32 -0.20 16 43 H 0.07 -0.12 7.60 -51.93 -0.39 -0.51 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.06 -0.11 4.81 -51.93 -0.25 -0.36 16 46 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 47 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 48 H 0.07 -0.29 6.86 -51.93 -0.36 -0.65 16 49 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 51 H 0.10 -0.14 6.16 -51.93 -0.32 -0.46 16 LS Contribution 404.62 15.07 6.10 6.10 Total: 0.00 -7.99 404.62 -8.91 -16.90 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -6.66 Total: -12.51 kcal Atomic # 6 Polarization: 3.80 SS G_CDS: -1.41 Total: 2.39 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.20 Total: 0.63 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -1.75 Total: -7.45 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.07 Total: -0.14 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -7.99 -8.91 -16.90 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_4549640.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -227.148 kcal (2) G-P(sol) polarization free energy of solvation -7.992 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -235.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.907 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -244.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds