Wall clock time and date at job start Sat Mar 6 2021 20:52:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34229 * 117.00052 * 2 1 4 4 O 1.20822 * 120.00124 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00104 * 180.02562 * 3 2 1 6 6 N 1.46496 * 109.47101 * 34.99963 * 5 3 2 7 7 C 1.34777 * 120.00258 * 300.00499 * 6 5 3 8 8 O 1.21279 * 120.00166 * 359.97438 * 7 6 5 9 9 C 1.50706 * 119.99762 * 179.97438 * 7 6 5 10 10 F 1.39897 * 109.47068 * 299.99527 * 9 7 6 11 11 F 1.39895 * 109.47042 * 59.99836 * 9 7 6 12 12 O 1.42906 * 109.46702 * 179.97438 * 9 7 6 13 13 C 1.35903 * 116.99522 * 179.97438 * 12 9 7 14 14 C 1.38725 * 120.05861 * 359.72783 * 13 12 9 15 15 C 1.38145 * 119.94387 * 179.74053 * 14 13 12 16 16 C 1.38270 * 120.05488 * 0.51442 * 15 14 13 17 17 C 1.50696 * 119.94227 * 179.74316 * 16 15 14 18 18 O 1.42902 * 109.47181 * 120.02040 * 17 16 15 19 19 Si 1.86292 * 109.47482 * 0.02562 * 17 16 15 20 20 C 1.38269 * 120.11023 * 359.75936 * 16 15 14 21 21 C 1.38139 * 120.05370 * 359.97438 * 20 16 15 22 22 C 1.52997 * 109.47084 * 275.00464 * 5 3 2 23 23 C 1.52997 * 109.47232 * 179.97438 * 22 5 3 24 24 C 1.53002 * 109.47143 * 59.99957 * 23 22 5 25 25 H 1.09000 * 109.47312 * 180.02562 * 24 23 22 26 26 C 1.52996 * 109.46969 * 60.00070 * 24 23 22 27 27 C 1.52997 * 109.47092 * 300.00129 * 24 23 22 28 28 C 1.52993 * 109.47230 * 155.00542 * 5 3 2 29 29 H 1.08996 * 109.47136 * 59.99303 * 1 2 3 30 30 H 1.09001 * 109.46796 * 179.97438 * 1 2 3 31 31 H 1.09007 * 109.46953 * 299.99332 * 1 2 3 32 32 H 0.96999 * 119.99694 * 119.99889 * 6 5 3 33 33 H 1.08000 * 120.02603 * 359.97438 * 14 13 12 34 34 H 1.08002 * 119.97017 * 180.23008 * 15 14 13 35 35 H 1.09005 * 109.47273 * 240.01690 * 17 16 15 36 36 H 0.96702 * 113.99741 * 300.00264 * 18 17 16 37 37 H 1.48506 * 110.00394 * 180.02562 * 19 17 16 38 38 H 1.48513 * 109.99880 * 301.31916 * 19 17 16 39 39 H 1.07997 * 119.96991 * 179.97438 * 20 16 15 40 40 H 1.08006 * 120.02293 * 179.97438 * 21 20 16 41 41 H 1.09002 * 109.47045 * 299.99967 * 22 5 3 42 42 H 1.08998 * 109.47624 * 59.99590 * 22 5 3 43 43 H 1.09002 * 109.47153 * 299.99992 * 23 22 5 44 44 H 1.09004 * 109.47261 * 179.97438 * 23 22 5 45 45 H 1.09004 * 109.47552 * 300.00092 * 26 24 23 46 46 H 1.09000 * 109.47380 * 60.00701 * 26 24 23 47 47 H 1.09001 * 109.46997 * 180.02562 * 26 24 23 48 48 H 1.09002 * 109.47045 * 299.99867 * 27 24 23 49 49 H 1.09001 * 109.47375 * 179.97438 * 27 24 23 50 50 H 1.09004 * 109.46862 * 299.99896 * 28 5 3 51 51 H 1.09002 * 109.47722 * 59.99845 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1129 0.1707 -0.7932 7 6 3.8538 -1.1042 -0.4415 8 8 3.1685 -1.3375 0.5316 9 6 4.4156 -2.2400 -1.2573 10 9 3.9428 -2.1491 -2.5708 11 9 5.8126 -2.1669 -1.2584 12 8 4.0046 -3.4845 -0.6876 13 6 4.4286 -4.6169 -1.3080 14 6 5.2192 -4.5320 -2.4447 15 6 5.6534 -5.6847 -3.0703 16 6 5.2918 -6.9221 -2.5705 17 6 5.7621 -8.1778 -3.2583 18 8 6.5415 -8.9562 -2.3480 19 14 6.8023 -7.7243 -4.7357 20 6 4.4992 -7.0093 -1.4409 21 6 4.0670 -5.8597 -0.8086 22 6 4.0828 1.1756 1.4362 23 6 5.6107 1.2551 1.4356 24 6 6.0519 2.5872 0.8259 25 1 7.1404 2.6436 0.8250 26 6 5.4816 3.7406 1.6537 27 6 5.5354 2.6865 -0.6108 28 6 4.0070 2.6072 -0.6100 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8901 32 1 4.6612 0.3573 -1.5713 33 1 5.4981 -3.5657 -2.8381 34 1 6.2720 -5.6191 -3.9532 35 1 4.8991 -8.7578 -3.5856 36 1 7.3275 -8.5017 -2.0149 37 1 7.2718 -8.9541 -5.4232 38 1 6.0129 -6.8878 -5.6752 39 1 4.2178 -7.9770 -1.0527 40 1 3.4476 -5.9284 0.0735 41 1 3.6761 1.9971 2.0260 42 1 3.7689 0.2264 1.8704 43 1 6.0170 0.4333 0.8458 44 1 5.9786 1.1848 2.4592 45 1 4.3930 3.6841 1.6542 46 1 5.8496 3.6700 2.6773 47 1 5.7955 4.6897 1.2191 48 1 5.9418 1.8647 -1.2006 49 1 5.8494 3.6357 -1.0451 50 1 3.6390 2.6779 -1.6336 51 1 3.6003 3.4288 -0.0202 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11976204_4549640.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:52:36 Heat of formation + Delta-G solvation = -239.813398 kcal Electronic energy + Delta-G solvation = -40913.511772 eV Core-core repulsion = 35416.664346 eV Total energy + Delta-G solvation = -5496.847426 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.162 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -50.87324 -48.84132 -42.73228 -41.36715 -40.82736 -39.76285 -39.15924 -37.62729 -37.23259 -35.86962 -32.59996 -32.32965 -32.04380 -31.91323 -29.18955 -28.78083 -27.74335 -26.29774 -24.77011 -24.39712 -23.99545 -22.99012 -22.47661 -21.59914 -20.61728 -20.18734 -19.68060 -19.46020 -18.90689 -18.57456 -18.11770 -17.60220 -17.48197 -17.10727 -16.84661 -16.73222 -16.32935 -16.23572 -15.85092 -15.76795 -15.58224 -15.41457 -15.35213 -15.27127 -15.11220 -15.08214 -14.98367 -14.59167 -14.41192 -14.34747 -14.20675 -14.08011 -13.85271 -13.74012 -13.58410 -13.37642 -13.13757 -13.01132 -12.73628 -12.68908 -12.37876 -12.18169 -12.13563 -11.94380 -11.91512 -11.84585 -11.58297 -11.32093 -11.26751 -11.09603 -10.61791 -10.46117 -10.18278 -9.56615 -5.00391 0.02968 0.16497 0.35146 0.67277 0.92555 1.31113 1.54238 1.62756 1.70124 1.96240 1.96891 2.47205 2.67206 3.18594 3.25080 3.41930 3.49921 3.53105 3.55631 3.66335 3.75939 3.91528 3.94590 4.01863 4.10388 4.13526 4.19531 4.20174 4.22109 4.35153 4.36152 4.41160 4.51970 4.53508 4.57878 4.63851 4.79368 4.83427 4.83904 4.90139 4.91570 5.01529 5.05395 5.06187 5.08352 5.21466 5.21965 5.33637 5.35461 5.37434 5.39321 5.54937 5.78171 5.85567 6.38737 6.50026 6.78016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.342 6.342 3 C 0.451 3.549 4 O -0.523 6.523 5 C 0.204 3.796 6 N -0.684 5.684 7 C 0.516 3.484 8 O -0.459 6.459 9 C 0.437 3.563 10 F -0.174 7.174 11 F -0.168 7.168 12 O -0.302 6.302 13 C 0.088 3.912 14 C -0.193 4.193 15 C -0.078 4.078 16 C -0.142 4.142 17 C -0.069 4.069 18 O -0.554 6.554 19 Si 0.772 3.228 20 C -0.059 4.059 21 C -0.135 4.135 22 C -0.132 4.132 23 C -0.106 4.106 24 C -0.093 4.093 25 H 0.088 0.912 26 C -0.156 4.156 27 C -0.112 4.112 28 C -0.113 4.113 29 H 0.064 0.936 30 H 0.117 0.883 31 H 0.062 0.938 32 H 0.427 0.573 33 H 0.142 0.858 34 H 0.154 0.846 35 H 0.111 0.889 36 H 0.396 0.604 37 H -0.298 1.298 38 H -0.285 1.285 39 H 0.148 0.852 40 H 0.144 0.856 41 H 0.087 0.913 42 H 0.074 0.926 43 H 0.067 0.933 44 H 0.076 0.924 45 H 0.052 0.948 46 H 0.054 0.946 47 H 0.062 0.938 48 H 0.080 0.920 49 H 0.092 0.908 50 H 0.086 0.914 51 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.740 2.815 -1.516 6.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.257 6.257 3 C 0.293 3.707 4 O -0.411 6.411 5 C 0.117 3.883 6 N -0.342 5.342 7 C 0.294 3.706 8 O -0.328 6.328 9 C 0.359 3.641 10 F -0.155 7.155 11 F -0.149 7.149 12 O -0.219 6.219 13 C 0.045 3.955 14 C -0.212 4.212 15 C -0.095 4.095 16 C -0.142 4.142 17 C -0.179 4.179 18 O -0.362 6.362 19 Si 0.678 3.322 20 C -0.077 4.077 21 C -0.154 4.154 22 C -0.170 4.170 23 C -0.143 4.143 24 C -0.111 4.111 25 H 0.106 0.894 26 C -0.213 4.213 27 C -0.149 4.149 28 C -0.151 4.151 29 H 0.083 0.917 30 H 0.136 0.864 31 H 0.081 0.919 32 H 0.267 0.733 33 H 0.160 0.840 34 H 0.171 0.829 35 H 0.128 0.872 36 H 0.246 0.754 37 H -0.227 1.227 38 H -0.212 1.212 39 H 0.166 0.834 40 H 0.162 0.838 41 H 0.106 0.894 42 H 0.093 0.907 43 H 0.086 0.914 44 H 0.094 0.906 45 H 0.071 0.929 46 H 0.074 0.926 47 H 0.081 0.919 48 H 0.098 0.902 49 H 0.110 0.890 50 H 0.105 0.895 51 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 4.518 2.466 -1.633 5.400 hybrid contribution -0.924 -0.066 -0.319 0.979 sum 3.594 2.401 -1.952 4.743 Atomic orbital electron populations 1.23489 0.75777 1.05062 1.02477 1.86813 1.24139 1.32151 1.82548 1.24534 0.92667 0.81740 0.71768 1.90684 1.67194 1.37035 1.46195 1.20483 0.83735 0.88792 0.95324 1.45705 1.53544 1.02673 1.32303 1.19343 0.82229 0.83389 0.85650 1.90863 1.33964 1.82744 1.25256 1.21722 0.76246 0.87677 0.78436 1.93191 1.88044 1.96153 1.38156 1.93199 1.29363 1.96244 1.96082 1.86647 1.70922 1.11780 1.52503 1.19217 0.97103 0.85457 0.93739 1.21612 1.01761 1.01301 0.96483 1.21023 0.98335 0.90835 0.99332 1.20485 1.00625 0.95254 0.97873 1.25114 0.99957 0.91735 1.01083 1.86475 1.41974 1.43418 1.64328 0.93776 0.84590 0.79143 0.74654 1.21037 0.94594 0.98159 0.93891 1.20689 1.03341 0.88758 1.02588 1.22028 0.98708 1.04214 0.92063 1.21521 0.92258 0.98244 1.02309 1.21159 1.01139 0.94070 0.94715 0.89354 1.21979 1.00975 0.98291 1.00064 1.21665 0.91969 1.04276 0.97003 1.21894 0.98682 0.92098 1.02429 0.91713 0.86435 0.91896 0.73268 0.84005 0.82938 0.87159 0.75403 1.22651 1.21158 0.83391 0.83782 0.89439 0.90693 0.91429 0.90583 0.92898 0.92649 0.91899 0.90163 0.88994 0.89495 0.88478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.09 10.56 113.37 1.20 1.28 16 2 O -0.34 -2.63 6.73 -43.66 -0.29 -2.92 16 3 C 0.45 2.89 6.71 71.24 0.48 3.37 16 4 O -0.52 -5.50 15.84 21.97 0.35 -5.15 16 5 C 0.20 -0.06 0.63 2.86 0.00 -0.06 16 6 N -0.68 1.61 4.03 -426.34 -1.72 -0.11 16 7 C 0.52 1.63 6.28 87.66 0.55 2.18 16 8 O -0.46 -4.14 11.75 26.93 0.32 -3.83 16 9 C 0.44 1.20 2.05 71.24 0.15 1.35 16 10 F -0.17 -0.35 15.27 44.97 0.69 0.34 16 11 F -0.17 -0.01 15.31 44.97 0.69 0.68 16 12 O -0.30 -2.07 9.60 -73.42 -0.71 -2.77 16 13 C 0.09 0.43 6.48 22.50 0.15 0.58 16 14 C -0.19 -0.38 8.26 22.36 0.18 -0.20 16 15 C -0.08 0.07 8.66 22.26 0.19 0.26 16 16 C -0.14 0.05 5.39 -19.85 -0.11 -0.05 16 17 C -0.07 0.11 2.82 71.23 0.20 0.31 16 18 O -0.55 0.61 12.77 -148.98 -1.90 -1.29 16 19 Si 0.77 -2.41 29.78 68.60 2.04 -0.37 16 20 C -0.06 -0.05 9.60 22.25 0.21 0.17 16 21 C -0.14 -0.41 9.99 22.36 0.22 -0.18 16 22 C -0.13 0.02 4.23 30.59 0.13 0.14 16 23 C -0.11 0.43 5.29 30.59 0.16 0.59 16 24 C -0.09 0.62 3.19 -10.80 -0.03 0.58 16 25 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 26 C -0.16 0.79 8.50 71.98 0.61 1.40 16 27 C -0.11 0.95 5.28 30.61 0.16 1.11 16 28 C -0.11 0.51 4.04 30.61 0.12 0.63 16 29 H 0.06 0.17 8.13 -2.39 -0.02 0.15 16 30 H 0.12 -0.02 8.14 -2.39 -0.02 -0.04 16 31 H 0.06 0.22 8.13 -2.38 -0.02 0.20 16 32 H 0.43 -3.47 7.32 -92.71 -0.68 -4.15 16 33 H 0.14 0.00 5.10 -2.91 -0.01 -0.01 16 34 H 0.15 -0.84 4.87 -2.91 -0.01 -0.86 16 35 H 0.11 -0.08 7.96 -2.38 -0.02 -0.10 16 36 H 0.40 -3.56 8.70 -74.06 -0.64 -4.20 16 37 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 38 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 39 H 0.15 -0.22 8.06 -2.91 -0.02 -0.24 16 40 H 0.14 0.19 8.06 -2.91 -0.02 0.16 16 41 H 0.09 0.00 6.43 -2.39 -0.02 -0.01 16 42 H 0.07 0.33 6.17 -2.39 -0.01 0.31 16 43 H 0.07 -0.28 7.60 -2.39 -0.02 -0.29 16 44 H 0.08 -0.29 8.14 -2.38 -0.02 -0.31 16 45 H 0.05 -0.17 4.81 -2.39 -0.01 -0.18 16 46 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 47 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 48 H 0.08 -0.89 6.86 -2.39 -0.02 -0.91 16 49 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 50 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 51 H 0.10 -0.23 6.16 -2.39 -0.01 -0.25 16 Total: 0.00 -19.60 404.62 3.78 -15.83 By element: Atomic # 1 Polarization: -13.61 SS G_CDS: -0.27 Total: -13.88 kcal Atomic # 6 Polarization: 8.89 SS G_CDS: 4.58 Total: 13.47 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -1.72 Total: -0.11 kcal Atomic # 8 Polarization: -13.73 SS G_CDS: -2.24 Total: -15.97 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 1.38 Total: 1.02 kcal Atomic # 14 Polarization: -2.41 SS G_CDS: 2.04 Total: -0.37 kcal Total: -19.60 3.78 -15.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11976204_4549640.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -223.985 kcal (2) G-P(sol) polarization free energy of solvation -19.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -243.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -239.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds