Wall clock time and date at job start Sat Mar 6 2021 18:54:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35449 * 125.56442 * 2 1 4 4 C 1.50702 * 126.06633 * 359.97189 * 3 2 1 5 5 O 1.42897 * 109.46976 * 197.91787 * 4 3 2 6 6 Si 1.86298 * 109.47268 * 317.92040 * 4 3 2 7 7 C 1.39841 * 107.86455 * 179.71595 * 3 2 1 8 8 C 1.50700 * 126.45616 * 180.26199 * 7 3 2 9 9 C 1.37866 * 107.08355 * 0.41614 * 7 3 2 10 10 C 1.46682 * 126.23065 * 179.84532 * 9 7 3 11 11 O 1.21692 * 120.00248 * 359.71710 * 10 9 7 12 12 N 1.34775 * 119.99664 * 179.71529 * 10 9 7 13 13 C 1.46507 * 119.99658 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.85022 * 23.80443 * 13 12 10 15 15 C 1.53785 * 113.61265 * 155.00061 * 13 12 10 16 16 C 1.53784 * 87.08077 * 89.19788 * 15 13 12 17 17 H 1.08990 * 113.61772 * 270.80040 * 16 15 13 18 18 O 1.42905 * 113.61108 * 139.97595 * 16 15 13 19 19 C 1.35897 * 116.99774 * 157.04636 * 18 16 15 20 20 C 1.38737 * 120.05543 * 5.70031 * 19 18 16 21 21 C 1.38141 * 119.94430 * 180.02562 * 20 19 18 22 22 C 1.38270 * 120.05625 * 0.02562 * 21 20 19 23 23 C 1.38266 * 120.11128 * 0.25917 * 22 21 20 24 24 C 1.38154 * 120.05360 * 359.44226 * 23 22 21 25 25 C 1.53781 * 113.68989 * 252.53625 * 13 12 10 26 26 N 1.35536 * 125.56318 * 179.97438 * 2 1 3 27 27 H 1.08994 * 109.47190 * 274.05818 * 1 2 3 28 28 H 1.08995 * 109.47145 * 34.06339 * 1 2 3 29 29 H 1.09010 * 109.46758 * 154.05882 * 1 2 3 30 30 H 1.09001 * 109.46892 * 77.92150 * 4 3 2 31 31 H 0.96695 * 114.00518 * 60.00132 * 5 4 3 32 32 H 1.48498 * 109.99838 * 179.97438 * 6 4 3 33 33 H 1.48507 * 109.99693 * 301.31677 * 6 4 3 34 34 H 1.09000 * 109.47102 * 270.20560 * 8 7 3 35 35 H 1.08999 * 109.47337 * 30.20975 * 8 7 3 36 36 H 1.09002 * 109.46900 * 150.20728 * 8 7 3 37 37 H 0.96994 * 120.00583 * 0.02562 * 12 10 9 38 38 H 1.08999 * 113.61449 * 334.65469 * 15 13 12 39 39 H 1.08996 * 113.68990 * 203.75952 * 15 13 12 40 40 H 1.08001 * 120.02725 * 359.97438 * 20 19 18 41 41 H 1.07998 * 119.97311 * 179.97438 * 21 20 19 42 42 H 1.08003 * 119.94524 * 179.97438 * 22 21 20 43 43 H 1.07999 * 119.97247 * 179.70484 * 23 22 21 44 44 H 1.07995 * 120.02501 * 180.25909 * 24 23 22 45 45 H 1.08999 * 113.61395 * 156.33183 * 25 13 12 46 46 H 1.08994 * 113.61886 * 25.41947 * 25 13 12 47 47 H 0.97000 * 125.68204 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5321 -0.0006 5 8 2.8865 3.3879 -0.4149 6 14 0.3874 2.7103 -1.1783 7 6 3.6270 0.6767 0.0066 8 6 4.8486 1.5591 0.0145 9 6 3.6122 -0.7019 0.0009 10 6 4.7860 -1.5815 0.0015 11 8 5.9050 -1.1030 0.0022 12 7 4.6253 -2.9196 0.0013 13 6 5.7977 -3.7982 0.0013 14 1 6.6875 -3.3166 0.4069 15 6 5.5248 -5.1896 0.5966 16 6 5.1292 -5.6324 -0.8220 17 1 4.0737 -5.4820 -1.0480 18 8 5.5884 -6.9423 -1.1617 19 6 4.9165 -7.5956 -2.1458 20 6 3.9146 -6.9462 -2.8525 21 6 3.2327 -7.6127 -3.8520 22 6 3.5476 -8.9261 -4.1482 23 6 4.5416 -9.5774 -3.4414 24 6 5.2307 -8.9133 -2.4450 25 6 6.0389 -4.5067 -1.3421 26 7 2.2953 -1.1025 0.0005 27 1 -0.3633 0.0727 1.0250 28 1 -0.3633 0.8513 -0.5756 29 1 -0.3633 -0.9242 -0.4496 30 1 1.5009 2.8094 1.0041 31 1 3.2213 3.1981 -1.3020 32 1 -0.0905 4.1162 -1.1876 33 1 0.8008 2.3048 -2.5458 34 1 5.1465 1.7764 -1.0112 35 1 4.6203 2.4911 0.5317 36 1 5.6625 1.0482 0.5288 37 1 3.7335 -3.3011 0.0004 38 1 4.6973 -5.2065 1.3058 39 1 6.4177 -5.6864 0.9760 40 1 3.6675 -5.9207 -2.6207 41 1 2.4525 -7.1077 -4.4021 42 1 3.0130 -9.4456 -4.9297 43 1 4.7825 -10.6048 -3.6714 44 1 6.0099 -9.4212 -1.8962 45 1 7.0732 -4.8159 -1.4931 46 1 5.6265 -3.9723 -2.1978 47 1 1.9834 -2.0210 0.0006 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_12297754.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:54:43 Heat of formation + Delta-G solvation = -0.920853 kcal Electronic energy + Delta-G solvation = -29466.089654 eV Core-core repulsion = 25389.533149 eV Total energy + Delta-G solvation = -4076.556505 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.75170 -41.73341 -40.49144 -39.20422 -37.87958 -37.51969 -34.43955 -33.67607 -32.90682 -31.99119 -30.74089 -29.39677 -27.77265 -27.03978 -26.55834 -25.78631 -23.66635 -23.13939 -22.65686 -20.94126 -20.75702 -20.27587 -19.68652 -19.23167 -17.65784 -17.49955 -17.05835 -16.82785 -16.65396 -16.63552 -16.33480 -15.93772 -15.74411 -15.56290 -15.28981 -15.00277 -14.80904 -14.45949 -14.36118 -14.27319 -14.09289 -13.94010 -13.71095 -13.61262 -13.57206 -13.32300 -13.23507 -13.19033 -12.70946 -12.54635 -12.49720 -12.37426 -12.01499 -11.84532 -11.66035 -11.48238 -11.12527 -10.58467 -10.32655 -10.00698 -9.46809 -9.19333 -9.04559 -4.83129 0.33401 0.34208 0.45033 1.17728 1.62892 1.68561 1.81799 1.92222 2.08784 2.13183 2.30762 2.78616 3.15171 3.23397 3.39291 3.52132 3.55979 3.59919 3.71317 3.83578 3.89288 3.92304 3.94915 4.12074 4.21358 4.29159 4.36960 4.39568 4.44761 4.51426 4.54629 4.59009 4.59728 4.64638 4.67763 4.70545 4.74419 4.81546 4.91314 5.00428 5.06062 5.24884 5.32630 5.36160 5.41704 5.44533 5.56062 5.66759 5.77765 5.89332 6.19807 6.34173 6.41531 6.53947 7.06887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.065 3.935 3 C -0.207 4.207 4 C -0.031 4.031 5 O -0.528 6.528 6 Si 0.644 3.356 7 C -0.042 4.042 8 C -0.098 4.098 9 C -0.067 4.067 10 C 0.595 3.405 11 O -0.516 6.516 12 N -0.720 5.720 13 C 0.126 3.874 14 H 0.119 0.881 15 C -0.136 4.136 16 C 0.054 3.946 17 H 0.097 0.903 18 O -0.299 6.299 19 C 0.128 3.872 20 C -0.211 4.211 21 C -0.080 4.080 22 C -0.158 4.158 23 C -0.079 4.079 24 C -0.153 4.153 25 C -0.165 4.165 26 N -0.536 5.536 27 H 0.094 0.906 28 H 0.089 0.911 29 H 0.080 0.920 30 H 0.114 0.886 31 H 0.375 0.625 32 H -0.253 1.253 33 H -0.259 1.259 34 H 0.064 0.936 35 H 0.081 0.919 36 H 0.077 0.923 37 H 0.393 0.607 38 H 0.084 0.916 39 H 0.112 0.888 40 H 0.125 0.875 41 H 0.124 0.876 42 H 0.125 0.875 43 H 0.130 0.870 44 H 0.131 0.869 45 H 0.106 0.894 46 H 0.078 0.922 47 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.498 -4.170 0.366 7.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.053 4.053 3 C -0.214 4.214 4 C -0.141 4.141 5 O -0.334 6.334 6 Si 0.544 3.456 7 C -0.051 4.051 8 C -0.155 4.155 9 C -0.178 4.178 10 C 0.384 3.616 11 O -0.391 6.391 12 N -0.371 5.371 13 C 0.020 3.980 14 H 0.137 0.863 15 C -0.174 4.174 16 C -0.002 4.002 17 H 0.115 0.885 18 O -0.213 6.213 19 C 0.083 3.917 20 C -0.230 4.230 21 C -0.098 4.098 22 C -0.177 4.177 23 C -0.097 4.097 24 C -0.172 4.172 25 C -0.204 4.204 26 N -0.133 5.133 27 H 0.113 0.887 28 H 0.106 0.894 29 H 0.098 0.902 30 H 0.132 0.868 31 H 0.222 0.778 32 H -0.178 1.178 33 H -0.184 1.184 34 H 0.083 0.917 35 H 0.100 0.900 36 H 0.095 0.905 37 H 0.227 0.773 38 H 0.102 0.898 39 H 0.130 0.870 40 H 0.143 0.857 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.148 0.852 44 H 0.149 0.851 45 H 0.125 0.875 46 H 0.097 0.903 47 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -5.890 -3.406 0.360 6.813 hybrid contribution 0.283 -0.500 -0.704 0.908 sum -5.607 -3.906 -0.344 6.842 Atomic orbital electron populations 1.20565 0.87315 1.02431 1.03914 1.20147 0.93536 0.85673 1.05935 1.19607 0.92927 0.94955 1.13887 1.24212 0.97126 0.86078 1.06719 1.86554 1.51626 1.58020 1.37198 0.95582 0.85308 0.84563 0.80107 1.19793 0.94864 0.90704 0.99724 1.20521 0.93910 0.98680 1.02366 1.20031 0.82668 0.94049 1.21072 1.16994 0.87665 0.80975 0.75950 1.90855 1.24138 1.74759 1.49395 1.45574 1.08915 1.05762 1.76857 1.21595 0.90102 0.89474 0.96819 0.86294 1.23604 1.04188 0.94265 0.95305 1.24233 0.98594 0.80548 0.96848 0.88519 1.86176 1.54225 1.29635 1.51237 1.19044 0.91760 0.92019 0.88847 1.21227 1.00186 1.00953 1.00588 1.20983 0.98324 0.94621 0.95913 1.21130 0.99655 0.95278 1.01609 1.21046 0.94692 0.99812 0.94189 1.20513 1.03288 0.92246 1.01113 1.24031 1.02169 0.95911 0.98299 1.41742 1.05285 1.08200 1.58084 0.88741 0.89354 0.90153 0.86847 0.77761 1.17804 1.18360 0.91694 0.89981 0.90455 0.77336 0.89785 0.86962 0.85710 0.85776 0.85743 0.85181 0.85109 0.87540 0.90341 0.74743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.47 9.69 36.01 0.35 0.82 16 2 C 0.06 -0.12 6.79 -81.95 -0.56 -0.67 16 3 C -0.21 -0.13 5.23 -105.02 -0.55 -0.68 16 4 C -0.03 -0.01 3.05 36.01 0.11 0.10 16 5 O -0.53 -0.95 10.17 -35.23 -0.36 -1.31 16 6 Si 0.64 -0.48 28.15 -169.99 -4.78 -5.26 16 7 C -0.04 -0.10 6.17 -104.16 -0.64 -0.74 16 8 C -0.10 -0.28 8.45 36.01 0.30 0.03 16 9 C -0.07 -0.08 7.06 -81.98 -0.58 -0.66 16 10 C 0.60 1.16 7.79 -12.85 -0.10 1.06 16 11 O -0.52 -2.88 14.40 5.20 0.07 -2.80 16 12 N -0.72 1.07 5.26 -54.32 -0.29 0.78 16 13 C 0.13 -0.14 4.32 -67.11 -0.29 -0.43 16 14 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 15 C -0.14 0.31 7.66 -25.92 -0.20 0.12 16 16 C 0.05 -0.07 3.55 -25.91 -0.09 -0.17 16 17 H 0.10 -0.27 5.98 -51.93 -0.31 -0.58 16 18 O -0.30 -0.41 10.15 -19.42 -0.20 -0.61 16 19 C 0.13 0.21 6.68 -39.22 -0.26 -0.05 16 20 C -0.21 -0.11 9.01 -39.43 -0.36 -0.46 16 21 C -0.08 -0.01 10.04 -39.61 -0.40 -0.41 16 22 C -0.16 -0.04 10.04 -39.56 -0.40 -0.44 16 23 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 24 C -0.15 -0.21 9.99 -39.43 -0.39 -0.60 16 25 C -0.17 0.15 7.71 -25.91 -0.20 -0.05 16 26 N -0.54 1.19 5.99 -5.70 -0.03 1.16 16 27 H 0.09 -0.63 8.14 -51.93 -0.42 -1.05 16 28 H 0.09 -0.50 3.02 -51.93 -0.16 -0.66 16 29 H 0.08 -0.56 8.14 -51.92 -0.42 -0.98 16 30 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H 0.37 -0.09 8.28 45.56 0.38 0.29 16 32 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 33 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 34 H 0.06 0.15 8.14 -51.93 -0.42 -0.28 16 35 H 0.08 0.23 6.55 -51.93 -0.34 -0.11 16 36 H 0.08 0.34 6.49 -51.93 -0.34 0.00 16 37 H 0.39 -1.73 7.83 -40.82 -0.32 -2.05 16 38 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 40 H 0.13 -0.17 5.93 -52.49 -0.31 -0.48 16 41 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 42 H 0.12 -0.18 8.06 -52.48 -0.42 -0.61 16 43 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 44 H 0.13 0.05 8.06 -52.49 -0.42 -0.38 16 45 H 0.11 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 47 H 0.42 -2.34 8.19 -40.82 -0.33 -2.67 16 LS Contribution 378.51 15.07 5.70 5.70 Total: 0.00 -9.43 378.51 -10.91 -20.34 By element: Atomic # 1 Polarization: -7.96 SS G_CDS: -6.38 Total: -14.34 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -4.65 Total: -3.67 kcal Atomic # 7 Polarization: 2.26 SS G_CDS: -0.32 Total: 1.94 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -0.48 Total: -4.72 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -4.78 Total: -5.26 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -9.43 -10.91 -20.34 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12297754.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.424 kcal (2) G-P(sol) polarization free energy of solvation -9.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.345 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.921 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds