Wall clock time and date at job start Sat Mar 6 2021 18:54:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86293 * 109.47219 * 2 1 4 4 C 1.50700 * 109.47278 * 120.00368 * 2 1 3 5 5 C 1.37860 * 119.89044 * 65.29692 * 4 2 1 6 6 C 1.39665 * 119.87394 * 180.27745 * 5 4 2 7 7 C 1.47692 * 120.16388 * 179.69989 * 6 5 4 8 8 O 1.21569 * 119.99967 * 179.72810 * 7 6 5 9 9 N 1.34777 * 119.99889 * 359.72540 * 7 6 5 10 10 C 1.46501 * 119.99658 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85330 * 23.79892 * 10 9 7 12 12 C 1.53778 * 113.61494 * 154.99701 * 10 9 7 13 13 C 1.53778 * 87.07998 * 89.11625 * 12 10 9 14 14 H 1.09001 * 113.61418 * 270.88308 * 13 12 10 15 15 O 1.42897 * 113.61684 * 139.98413 * 13 12 10 16 16 C 1.35900 * 117.00414 * 156.68201 * 15 13 12 17 17 C 1.38732 * 120.05568 * 5.42743 * 16 15 13 18 18 C 1.38144 * 119.94857 * 179.74534 * 17 16 15 19 19 C 1.38268 * 120.04933 * 0.51084 * 18 17 16 20 20 C 1.38259 * 120.11711 * 359.76597 * 19 18 17 21 21 C 1.38142 * 120.05290 * 359.97438 * 20 19 18 22 22 C 1.53775 * 87.08507 * 25.43234 * 13 12 10 23 23 C 1.39814 * 119.66593 * 359.42353 * 6 5 4 24 24 F 1.35104 * 120.10942 * 180.29701 * 23 6 5 25 25 C 1.38322 * 119.78352 * 0.27972 * 23 6 5 26 26 C 1.38206 * 120.11723 * 0.02562 * 25 23 6 27 27 H 0.96694 * 113.99372 * 299.99691 * 1 2 3 28 28 H 1.09003 * 109.46759 * 240.00017 * 2 1 3 29 29 H 1.48507 * 110.00113 * 300.00148 * 3 2 1 30 30 H 1.48496 * 110.00144 * 61.31969 * 3 2 1 31 31 H 1.07998 * 120.06175 * 359.97438 * 5 4 2 32 32 H 0.96997 * 120.00063 * 0.02562 * 9 7 6 33 33 H 1.08996 * 113.61283 * 334.56944 * 12 10 9 34 34 H 1.09000 * 113.61523 * 203.66198 * 12 10 9 35 35 H 1.08004 * 120.02520 * 359.97438 * 17 16 15 36 36 H 1.07997 * 119.97784 * 180.28083 * 18 17 16 37 37 H 1.08011 * 119.94282 * 179.74448 * 19 18 17 38 38 H 1.07998 * 119.97966 * 179.97438 * 20 19 18 39 39 H 1.08003 * 120.02757 * 180.02562 * 21 20 19 40 40 H 1.09002 * 113.61351 * 89.11168 * 22 13 12 41 41 H 1.08996 * 113.61665 * 220.02187 * 22 13 12 42 42 H 1.08007 * 119.94485 * 180.02562 * 25 23 6 43 43 H 1.07993 * 119.83192 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6895 -2.0580 1.3925 6 6 2.1502 -2.7148 2.5357 7 6 1.8889 -4.1569 2.7191 8 8 2.2956 -4.7267 3.7130 9 7 1.1996 -4.8410 1.7846 10 6 0.9399 -6.2712 1.9668 11 1 0.9673 -6.5765 3.0129 12 6 -0.3016 -6.7731 1.2110 13 6 0.6301 -7.0400 0.0171 14 1 0.7386 -6.1860 -0.6516 15 8 0.3391 -8.2554 -0.6758 16 6 0.7463 -8.3409 -1.9695 17 6 1.5098 -7.3251 -2.5262 18 6 1.9270 -7.4167 -3.8399 19 6 1.5754 -8.5149 -4.6030 20 6 0.8098 -9.5259 -4.0524 21 6 0.3946 -9.4414 -2.7375 22 6 1.7721 -7.1715 1.0385 23 6 2.8650 -2.0017 3.5029 24 9 3.3201 -2.6295 4.6093 25 6 3.1051 -0.6514 3.3230 26 6 2.6396 -0.0090 2.1914 27 1 -0.3932 0.4417 0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 1.1406 -2.6035 0.6393 32 1 0.8754 -4.3863 0.9915 33 1 -1.0416 -5.9955 1.0219 34 1 -0.7359 -7.6777 1.6366 35 1 1.7808 -6.4650 -1.9319 36 1 2.5251 -6.6284 -4.2724 37 1 1.8991 -8.5828 -5.6312 38 1 0.5361 -10.3824 -4.6505 39 1 -0.2031 -10.2317 -2.3076 40 1 1.9047 -8.1850 1.4170 41 1 2.7062 -6.7155 0.7103 42 1 3.6574 -0.0981 4.0683 43 1 2.8301 1.0453 2.0554 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_12335834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:54:50 Heat of formation + Delta-G solvation = -52.631364 kcal Electronic energy + Delta-G solvation = -29076.973012 eV Core-core repulsion = 24776.995204 eV Total energy + Delta-G solvation = -4299.977808 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.126 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -49.91346 -41.90624 -41.13362 -40.22980 -39.21188 -37.77515 -37.44921 -34.47660 -32.61863 -32.35405 -31.92622 -30.66944 -27.00104 -26.83247 -26.60946 -25.34749 -23.73586 -23.32937 -22.81274 -21.79295 -20.64387 -19.59840 -19.22729 -18.47189 -18.41376 -17.48742 -17.38194 -16.90691 -16.83295 -16.75798 -16.44428 -16.32763 -16.06796 -15.83344 -15.76414 -15.52251 -15.10633 -14.97704 -14.62260 -14.42864 -14.39475 -14.04044 -13.73134 -13.70537 -13.58570 -13.31353 -13.19793 -12.94194 -12.66394 -12.49524 -12.44214 -11.97503 -11.86933 -11.60359 -11.43367 -11.18416 -10.78748 -10.49818 -10.25189 -9.95695 -9.93759 -9.14221 -5.13977 -0.59232 -0.17797 0.38569 0.49990 1.06211 1.40597 1.56028 1.78879 1.81574 2.18350 2.38473 2.83596 2.94349 3.10238 3.19427 3.27025 3.29817 3.32799 3.44677 3.58422 3.62105 3.79638 3.88649 3.91965 3.95058 4.16509 4.23913 4.26450 4.37365 4.44510 4.49956 4.55803 4.57523 4.60569 4.63932 4.68760 4.73746 4.78350 4.79221 4.86056 4.96606 5.05420 5.30358 5.38272 5.46329 5.46812 5.60869 5.82661 6.17625 6.22846 6.46545 7.01426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.138 4.138 5 C -0.031 4.031 6 C -0.176 4.176 7 C 0.563 3.437 8 O -0.515 6.515 9 N -0.711 5.711 10 C 0.123 3.877 11 H 0.118 0.882 12 C -0.136 4.136 13 C 0.054 3.946 14 H 0.099 0.901 15 O -0.299 6.299 16 C 0.128 3.872 17 C -0.211 4.211 18 C -0.080 4.080 19 C -0.159 4.159 20 C -0.080 4.080 21 C -0.153 4.153 22 C -0.165 4.165 23 C 0.169 3.831 24 F -0.110 7.110 25 C -0.156 4.156 26 C -0.060 4.060 27 H 0.378 0.622 28 H 0.123 0.877 29 H -0.254 1.254 30 H -0.257 1.257 31 H 0.138 0.862 32 H 0.400 0.600 33 H 0.085 0.915 34 H 0.112 0.888 35 H 0.126 0.874 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.130 0.870 39 H 0.131 0.869 40 H 0.106 0.894 41 H 0.079 0.921 42 H 0.150 0.850 43 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.654 3.774 -3.609 5.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.183 4.183 3 Si 0.587 3.413 4 C -0.139 4.139 5 C -0.050 4.050 6 C -0.180 4.180 7 C 0.350 3.650 8 O -0.390 6.390 9 N -0.364 5.364 10 C 0.018 3.982 11 H 0.136 0.864 12 C -0.174 4.174 13 C -0.003 4.003 14 H 0.117 0.883 15 O -0.213 6.213 16 C 0.083 3.917 17 C -0.229 4.229 18 C -0.098 4.098 19 C -0.177 4.177 20 C -0.098 4.098 21 C -0.172 4.172 22 C -0.204 4.204 23 C 0.148 3.852 24 F -0.088 7.088 25 C -0.175 4.175 26 C -0.078 4.078 27 H 0.226 0.774 28 H 0.140 0.860 29 H -0.178 1.178 30 H -0.182 1.182 31 H 0.155 0.845 32 H 0.236 0.764 33 H 0.104 0.896 34 H 0.130 0.870 35 H 0.144 0.856 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.125 0.875 41 H 0.098 0.902 42 H 0.168 0.832 43 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.734 3.710 -3.255 4.990 hybrid contribution -0.987 0.129 0.219 1.019 sum -0.253 3.839 -3.036 4.901 Atomic orbital electron populations 1.86621 1.17367 1.79961 1.49490 1.25022 0.84205 1.11217 0.97891 0.94955 0.91508 0.74177 0.80707 1.20266 1.01264 0.94453 0.97888 1.21017 0.95215 0.93835 0.94898 1.20023 1.06044 0.94439 0.97474 1.17961 0.78165 0.85880 0.82964 1.90885 1.49871 1.69855 1.28377 1.45563 1.57278 1.09489 1.24029 1.21627 0.95619 0.79648 1.01302 0.86362 1.23605 0.96669 1.02889 0.94211 1.24241 0.97300 0.86814 0.91916 0.88315 1.86172 1.75624 1.37779 1.21701 1.19044 0.94100 0.94832 0.83689 1.21244 1.04071 1.00166 0.97434 1.20987 0.97821 0.97766 0.93220 1.21126 1.01085 0.95004 1.00491 1.21033 0.96108 0.98548 0.94102 1.20507 1.04483 0.98215 0.94005 1.24027 0.98186 1.01839 0.96310 1.17753 0.93789 0.90439 0.83193 1.91639 1.85684 1.82250 1.49214 1.21184 1.03586 0.92542 1.00149 1.21162 0.94388 1.00164 0.92095 0.77393 0.85964 1.17826 1.18196 0.84463 0.76389 0.89646 0.86974 0.85590 0.85730 0.85770 0.85228 0.85151 0.87548 0.90233 0.83177 0.83997 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.82 12.83 -35.23 -0.45 0.37 16 2 C -0.07 0.23 2.79 36.01 0.10 0.33 16 3 Si 0.69 -2.26 29.87 -169.99 -5.08 -7.34 16 4 C -0.14 0.36 5.34 -104.68 -0.56 -0.20 16 5 C -0.03 0.06 9.17 -39.19 -0.36 -0.30 16 6 C -0.18 -0.11 5.88 -104.91 -0.62 -0.72 16 7 C 0.56 1.26 7.77 -12.40 -0.10 1.16 16 8 O -0.51 -3.28 14.94 5.30 0.08 -3.21 16 9 N -0.71 0.67 5.21 -54.01 -0.28 0.38 16 10 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 11 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 12 C -0.14 0.25 7.66 -25.92 -0.20 0.05 16 13 C 0.05 -0.05 3.56 -25.92 -0.09 -0.14 16 14 H 0.10 -0.22 5.95 -51.93 -0.31 -0.53 16 15 O -0.30 -0.52 10.15 -19.43 -0.20 -0.72 16 16 C 0.13 0.26 6.68 -39.22 -0.26 0.00 16 17 C -0.21 -0.18 9.02 -39.43 -0.36 -0.54 16 18 C -0.08 -0.04 10.04 -39.60 -0.40 -0.44 16 19 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16 20 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 21 C -0.15 -0.26 9.99 -39.43 -0.39 -0.65 16 22 C -0.16 0.10 7.71 -25.92 -0.20 -0.10 16 23 C 0.17 0.24 7.29 -38.96 -0.28 -0.05 16 24 F -0.11 -0.47 15.55 2.25 0.04 -0.44 16 25 C -0.16 0.22 10.01 -39.56 -0.40 -0.17 16 26 C -0.06 0.17 8.66 -39.51 -0.34 -0.17 16 27 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 28 H 0.12 -0.50 7.96 -51.93 -0.41 -0.91 16 29 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 30 H -0.26 0.39 7.00 56.52 0.40 0.78 16 31 H 0.14 -0.55 6.41 -52.49 -0.34 -0.89 16 32 H 0.40 -1.42 6.73 -40.82 -0.27 -1.69 16 33 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 34 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.13 -0.12 5.91 -52.48 -0.31 -0.43 16 36 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 37 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 38 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 39 H 0.13 0.09 8.06 -52.48 -0.42 -0.33 16 40 H 0.11 -0.02 8.14 -51.93 -0.42 -0.45 16 41 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 42 H 0.15 -0.49 8.06 -52.48 -0.42 -0.91 16 43 H 0.14 -0.69 4.82 -52.49 -0.25 -0.94 16 LS Contribution 365.45 15.07 5.51 5.51 Total: 0.00 -8.83 365.45 -10.82 -19.66 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -4.90 Total: -10.95 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -5.54 Total: -3.26 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.28 Total: 0.38 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.57 Total: -3.55 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: -5.08 Total: -7.34 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -8.83 -10.82 -19.66 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12335834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.975 kcal (2) G-P(sol) polarization free energy of solvation -8.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.656 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.631 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds